RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
LYSMD4-202ENST00000344791 C8orf34Q49A92 452 aa24.76■■□□□ 1.55
LYSMD4-202ENST00000344791 DAXXQ9UER7 740 aaPredicted RBP24.76■■□□□ 1.55
LYSMD4-202ENST00000344791 U2AF1L5P0DN76 240 aaPredicted RBP24.76■■□□□ 1.55
LYSMD4-202ENST00000344791 U2AF1Q01081 240 aaKnown RBP eCLIP24.76■■□□□ 1.55
LYSMD4-202ENST00000344791 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 RUNDC1Q96C34 613 aa24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 CGNL1Q0VF96 1302 aa24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 ADGRB3O60242 1522 aa24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 SRPK2P78362 688 aaKnown RBP24.74■■□□□ 1.55
LYSMD4-202ENST00000344791 POGZQ7Z3K3 1410 aa24.73■■□□□ 1.55
LYSMD4-202ENST00000344791 NRXN1Q9ULB1 1477 aa24.72■■□□□ 1.55
LYSMD4-202ENST00000344791 U2SURPO15042 1029 aaKnown RBP24.72■■□□□ 1.55
LYSMD4-202ENST00000344791 IDI1Q13907 227 aa24.71■■□□□ 1.55
LYSMD4-202ENST00000344791 DDRGK1Q96HY6 314 aa24.71■■□□□ 1.55
LYSMD4-202ENST00000344791 GGNBP2Q9H3C7 697 aa24.71■■□□□ 1.55
LYSMD4-202ENST00000344791 SBNO2Q9Y2G9 1366 aa24.71■■□□□ 1.55
LYSMD4-202ENST00000344791 IFT172Q9UG01 1749 aa24.71■■□□□ 1.55
LYSMD4-202ENST00000344791 CFAP53Q96M91 514 aa24.7■■□□□ 1.54
LYSMD4-202ENST00000344791 EVC2Q86UK5 1308 aa24.7■■□□□ 1.54
LYSMD4-202ENST00000344791 FRMPD1Q5SYB0 1578 aa24.69■■□□□ 1.54
LYSMD4-202ENST00000344791 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
LYSMD4-202ENST00000344791 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
LYSMD4-202ENST00000344791 QRICH2Q9H0J4 1663 aa24.68■■□□□ 1.54
LYSMD4-202ENST00000344791 RLBP1P12271 317 aa24.68■■□□□ 1.54
LYSMD4-202ENST00000344791 RARSP54136 660 aaKnown RBP24.67■■□□□ 1.54
LYSMD4-202ENST00000344791 TSR2Q969E8 191 aaKnown RBP24.66■■□□□ 1.54
LYSMD4-202ENST00000344791 LMTK2Q8IWU2 1503 aa24.66■■□□□ 1.54
LYSMD4-202ENST00000344791 ADGRB1O14514 1584 aa24.65■■□□□ 1.54
LYSMD4-202ENST00000344791 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
LYSMD4-202ENST00000344791 PDE3AQ14432 1141 aa24.63■■□□□ 1.53
LYSMD4-202ENST00000344791 ABCC3O15438 1527 aa24.63■■□□□ 1.53
LYSMD4-202ENST00000344791 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
LYSMD4-202ENST00000344791 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
LYSMD4-202ENST00000344791 PPLO60437 1756 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 MYO3AQ8NEV4 1616 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 MLH3Q9UHC1 1453 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 HECW2Q9P2P5 1572 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 FBXO31Q5XUX0 539 aaPredicted RBP24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 POGKQ9P215 609 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 SETBP1Q9Y6X0 1596 aa24.61■■□□□ 1.53
LYSMD4-202ENST00000344791 SEC24BO95487 1268 aa24.6■■□□□ 1.53
LYSMD4-202ENST00000344791 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
LYSMD4-202ENST00000344791 NGEFQ8N5V2 710 aa24.6■■□□□ 1.53
LYSMD4-202ENST00000344791 PCDHB15Q9Y5E8 787 aa24.6■■□□□ 1.53
LYSMD4-202ENST00000344791 FBLN1P23142 703 aa24.59■■□□□ 1.53
LYSMD4-202ENST00000344791 SHPRHQ149N8 1683 aa24.58■■□□□ 1.53
LYSMD4-202ENST00000344791 GLI2P10070 1586 aa24.58■■□□□ 1.53
LYSMD4-202ENST00000344791 STAG3Q9UJ98 1225 aa24.58■■□□□ 1.53
LYSMD4-202ENST00000344791 A0A1W2PP64 1363 aa24.57■■□□□ 1.52
LYSMD4-202ENST00000344791 ANKRD36BQ8N2N9 1353 aa24.57■■□□□ 1.52
LYSMD4-202ENST00000344791 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
LYSMD4-202ENST00000344791 SIGLEC1Q9BZZ2 1709 aa24.56■■□□□ 1.52
LYSMD4-202ENST00000344791 NFKBIBQ15653 356 aa24.56■■□□□ 1.52
LYSMD4-202ENST00000344791 YEATS2Q9ULM3 1422 aa24.56■■□□□ 1.52
LYSMD4-202ENST00000344791 WDR63Q8IWG1 891 aa24.55■■□□□ 1.52
LYSMD4-202ENST00000344791 FTSJ3Q8IY81 847 aaKnown RBP24.53■■□□□ 1.52
LYSMD4-202ENST00000344791 MYH16Q9H6N6 1097 aa24.53■■□□□ 1.52
LYSMD4-202ENST00000344791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.53■■□□□ 1.52
LYSMD4-202ENST00000344791 EXOSC9Q06265 439 aaKnown RBP24.52■■□□□ 1.52
LYSMD4-202ENST00000344791 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
LYSMD4-202ENST00000344791 ZC3H13Q5T200 1668 aaKnown RBP24.51■■□□□ 1.51
LYSMD4-202ENST00000344791 CAMSAP1Q5T5Y3 1602 aa24.51■■□□□ 1.51
LYSMD4-202ENST00000344791 SMC4Q9NTJ3 1288 aa24.51■■□□□ 1.51
LYSMD4-202ENST00000344791 MAPK8IP3Q9UPT6 1336 aa24.51■■□□□ 1.51
LYSMD4-202ENST00000344791 IQSEC2Q5JU85 1478 aa24.5■■□□□ 1.51
LYSMD4-202ENST00000344791 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
LYSMD4-202ENST00000344791 MLECQ14165 292 aa24.5■■□□□ 1.51
LYSMD4-202ENST00000344791 NEXMIFQ5QGS0 1516 aa24.49■■□□□ 1.51
LYSMD4-202ENST00000344791 FYB1O15117 783 aa24.49■■□□□ 1.51
LYSMD4-202ENST00000344791 RTN4Q9NQC3 1192 aaKnown RBP24.49■■□□□ 1.51
LYSMD4-202ENST00000344791 USP35Q9P2H5 1018 aa24.49■■□□□ 1.51
LYSMD4-202ENST00000344791 PDZRN3Q9UPQ7 1066 aa24.49■■□□□ 1.51
LYSMD4-202ENST00000344791 CABP1Q9NZU7 370 aa24.48■■□□□ 1.51
LYSMD4-202ENST00000344791 TMPOP42166 694 aaKnown RBP24.47■■□□□ 1.51
LYSMD4-202ENST00000344791 PMFBP1Q8TBY8 1022 aa24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 FRAT2O75474 233 aaPredicted RBP24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 WAPLQ7Z5K2 1190 aa24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 IL27Q8NEV9 243 aa24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 TERF2IPQ9NYB0 399 aa24.46■■□□□ 1.51
LYSMD4-202ENST00000344791 RIPK4P57078 832 aa24.45■■□□□ 1.51
LYSMD4-202ENST00000344791 ITPRIPQ8IWB1 547 aa24.45■■□□□ 1.51
LYSMD4-202ENST00000344791 CDK19Q9BWU1 502 aa24.45■■□□□ 1.51
LYSMD4-202ENST00000344791 SLKQ9H2G2 1235 aaPredicted RBP24.45■■□□□ 1.51
LYSMD4-202ENST00000344791 CFAP74Q9C0B2 1584 aa24.45■■□□□ 1.5
LYSMD4-202ENST00000344791 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
LYSMD4-202ENST00000344791 USP19O94966 1318 aa24.45■■□□□ 1.5
LYSMD4-202ENST00000344791 NINLQ9Y2I6 1382 aa24.45■■□□□ 1.5
LYSMD4-202ENST00000344791 CCDC27Q2M243 656 aa24.44■■□□□ 1.5
LYSMD4-202ENST00000344791 DZIP1LQ8IYY4 767 aaKnown RBP24.44■■□□□ 1.5
LYSMD4-202ENST00000344791 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
LYSMD4-202ENST00000344791 TRIM35Q9UPQ4 493 aa24.44■■□□□ 1.5
LYSMD4-202ENST00000344791 SSH1Q8WYL5 1049 aa24.43■■□□□ 1.5
LYSMD4-202ENST00000344791 MVPQ14764 893 aaKnown RBP24.43■■□□□ 1.5
LYSMD4-202ENST00000344791 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
LYSMD4-202ENST00000344791 PLEKHF1Q96S99 279 aa24.41■■□□□ 1.5
LYSMD4-202ENST00000344791 TRIM27P14373 513 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms