RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 HSP90AB4PQ58FF6 505 aa19.95■□□□□ 0.78
CDC42BPG-201ENST00000342711 AK7Q96M32 723 aa19.94■□□□□ 0.78
CDC42BPG-201ENST00000342711 SAFBQ15424 915 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42BPG-201ENST00000342711 CTDP1Q9Y5B0 961 aaPredicted RBP19.93■□□□□ 0.78
CDC42BPG-201ENST00000342711 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
CDC42BPG-201ENST00000342711 PDILTQ8N807 584 aa19.92■□□□□ 0.78
CDC42BPG-201ENST00000342711 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
CDC42BPG-201ENST00000342711 TRAK2O60296 914 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 ACBD3Q9H3P7 528 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 NEUROD6Q96NK8 337 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 NAT10Q9H0A0 1025 aaKnown RBP19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 AAMPQ13685 434 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 OLFM4Q6UX06 510 aa19.91■□□□□ 0.78
CDC42BPG-201ENST00000342711 RALYLQ86SE5 291 aaKnown RBP19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 MSH5O43196 834 aa19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 CAVIN1Q6NZI2 390 aaKnown RBP19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 HSP90B2PQ58FF3 399 aa19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 RUSC2Q8N2Y8 1516 aa19.9■□□□□ 0.78
CDC42BPG-201ENST00000342711 WASHC4Q2M389 1173 aa19.89■□□□□ 0.77
CDC42BPG-201ENST00000342711 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
CDC42BPG-201ENST00000342711 AIMP1Q12904 312 aaKnown RBP19.88■□□□□ 0.77
CDC42BPG-201ENST00000342711 CDR1P51861 262 aa19.88■□□□□ 0.77
CDC42BPG-201ENST00000342711 RIC3Q7Z5B4 369 aa19.88■□□□□ 0.77
CDC42BPG-201ENST00000342711 SDF4Q9BRK5 362 aa19.88■□□□□ 0.77
CDC42BPG-201ENST00000342711 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
CDC42BPG-201ENST00000342711 NOM1Q5C9Z4 860 aaKnown RBP19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 KDM4AO75164 1064 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 NINLQ9Y2I6 1382 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 PSME1Q06323 249 aa19.87■□□□□ 0.77
CDC42BPG-201ENST00000342711 PSMA5P28066 241 aa19.86■□□□□ 0.77
CDC42BPG-201ENST00000342711 RRP12Q5JTH9 1297 aaKnown RBP19.86■□□□□ 0.77
CDC42BPG-201ENST00000342711 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
CDC42BPG-201ENST00000342711 TRIM5Q9C035 493 aa19.86■□□□□ 0.77
CDC42BPG-201ENST00000342711 CCDC43Q96MW1 224 aaKnown RBP19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 FYB1O15117 783 aa19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 PRPF40AO75400 957 aaKnown RBP19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 TTLL5Q6EMB2 1281 aa19.85■□□□□ 0.77
CDC42BPG-201ENST00000342711 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
CDC42BPG-201ENST00000342711 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
CDC42BPG-201ENST00000342711 BRPF3Q9ULD4 1205 aa19.84■□□□□ 0.77
CDC42BPG-201ENST00000342711 CT47A1Q5JQC4 288 aaPredicted RBP19.84■□□□□ 0.77
CDC42BPG-201ENST00000342711 IGF1RP08069 1367 aa19.84■□□□□ 0.77
CDC42BPG-201ENST00000342711 FSD1Q9BTV5 496 aa19.83■□□□□ 0.77
CDC42BPG-201ENST00000342711 PDZRN3Q9UPQ7 1066 aa19.83■□□□□ 0.76
CDC42BPG-201ENST00000342711 BRMS1Q9HCU9 246 aa19.82■□□□□ 0.76
CDC42BPG-201ENST00000342711 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
CDC42BPG-201ENST00000342711 NEK4P51957 841 aa19.82■□□□□ 0.76
CDC42BPG-201ENST00000342711 SMC2O95347 1197 aa19.82■□□□□ 0.76
CDC42BPG-201ENST00000342711 CABP2Q9NPB3 220 aa19.82■□□□□ 0.76
CDC42BPG-201ENST00000342711 MTERF4Q7Z6M4 381 aaKnown RBP19.81■□□□□ 0.76
CDC42BPG-201ENST00000342711 MBD3O95983 291 aa19.81■□□□□ 0.76
CDC42BPG-201ENST00000342711 EPS15P42566 896 aa19.81■□□□□ 0.76
CDC42BPG-201ENST00000342711 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
CDC42BPG-201ENST00000342711 MAP7D2Q96T17 732 aa19.8■□□□□ 0.76
CDC42BPG-201ENST00000342711 OFD1O75665 1012 aa19.8■□□□□ 0.76
CDC42BPG-201ENST00000342711 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 PTPRGP23470 1445 aa19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 XBP1P17861 261 aa19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 SURF6O75683 361 aaKnown RBP19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 TCP11L2Q8N4U5 519 aa19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 MTMR7Q9Y216 660 aa19.79■□□□□ 0.76
CDC42BPG-201ENST00000342711 ODF2Q5BJF6 829 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 KINO60870 393 aaKnown RBP19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 MTHFSP49914 203 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 CCDC173Q0VFZ6 552 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 FMNL2Q96PY5 1086 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 RAPGEF4Q8WZA2 1011 aa19.78■□□□□ 0.76
CDC42BPG-201ENST00000342711 ERCC4Q92889 916 aaPredicted RBP19.77■□□□□ 0.76
CDC42BPG-201ENST00000342711 CLASRPQ8N2M8 674 aaKnown RBP19.77■□□□□ 0.76
CDC42BPG-201ENST00000342711 DNAJC2Q99543 621 aaKnown RBP19.77■□□□□ 0.76
CDC42BPG-201ENST00000342711 RBM10P98175 930 aaKnown RBP19.77■□□□□ 0.76
CDC42BPG-201ENST00000342711 FIBPO43427 364 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 RABEP1Q15276 862 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 NUTM2GQ5VZR2 741 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 SPC24Q8NBT2 197 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 CWC15Q9P013 229 aaKnown RBP19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 CFTRP13569 1480 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
CDC42BPG-201ENST00000342711 ATP2B1P20020 1258 aa19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 H0YHG0 523 aa19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 GNAI3P08754 354 aa19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 CEBPZQ03701 1054 aaKnown RBP19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 SKIDA1Q1XH10 827 aa19.75■□□□□ 0.75
CDC42BPG-201ENST00000342711 CALRP27797 417 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms