RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 CGNL1Q0VF96 1302 aa9.51□□□□□ -0.89
FCF1-201ENST00000341162 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
FCF1-201ENST00000341162 AAMPQ13685 434 aa9.51□□□□□ -0.89
FCF1-201ENST00000341162 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
FCF1-201ENST00000341162 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
FCF1-201ENST00000341162 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
FCF1-201ENST00000341162 ZMYM3Q14202 1370 aa9.5□□□□□ -0.89
FCF1-201ENST00000341162 PPP2R1AP30153 589 aa9.5□□□□□ -0.89
FCF1-201ENST00000341162 COL3A1P02461 1466 aaPredicted RBP9.5□□□□□ -0.89
FCF1-201ENST00000341162 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
FCF1-201ENST00000341162 TSPOAP1O95153 1857 aa9.49□□□□□ -0.89
FCF1-201ENST00000341162 C3P01024 1663 aa9.49□□□□□ -0.89
FCF1-201ENST00000341162 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
FCF1-201ENST00000341162 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
FCF1-201ENST00000341162 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
FCF1-201ENST00000341162 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
FCF1-201ENST00000341162 ARHGAP23Q9P227 1491 aa9.48□□□□□ -0.89
FCF1-201ENST00000341162 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
FCF1-201ENST00000341162 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
FCF1-201ENST00000341162 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
FCF1-201ENST00000341162 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
FCF1-201ENST00000341162 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.89
FCF1-201ENST00000341162 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
FCF1-201ENST00000341162 RIMS2Q9UQ26 1411 aa9.46□□□□□ -0.9
FCF1-201ENST00000341162 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.9
FCF1-201ENST00000341162 NSD3Q9BZ95 1437 aa9.46□□□□□ -0.9
FCF1-201ENST00000341162 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
FCF1-201ENST00000341162 RRP1P56182 461 aaKnown RBP9.45□□□□□ -0.9
FCF1-201ENST00000341162 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
FCF1-201ENST00000341162 PTCH1Q13635 1447 aa9.44□□□□□ -0.9
FCF1-201ENST00000341162 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
FCF1-201ENST00000341162 PNPLA6Q8IY17 1366 aa9.44□□□□□ -0.9
FCF1-201ENST00000341162 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
FCF1-201ENST00000341162 CDK12Q9NYV4 1490 aaPredicted RBP9.42□□□□□ -0.9
FCF1-201ENST00000341162 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
FCF1-201ENST00000341162 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
FCF1-201ENST00000341162 CFAP65Q6ZU64 1925 aaKnown RBP9.42□□□□□ -0.9
FCF1-201ENST00000341162 MS4A1P11836 297 aa9.42□□□□□ -0.9
FCF1-201ENST00000341162 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
FCF1-201ENST00000341162 RCAN3Q9UKA8 241 aa9.42□□□□□ -0.9
FCF1-201ENST00000341162 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
FCF1-201ENST00000341162 PPIP5K1Q6PFW1 1433 aa9.41□□□□□ -0.9
FCF1-201ENST00000341162 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.41□□□□□ -0.9
FCF1-201ENST00000341162 PIK3R4Q99570 1358 aa9.41□□□□□ -0.9
FCF1-201ENST00000341162 RAPGEF3O95398 923 aa9.41□□□□□ -0.9
FCF1-201ENST00000341162 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
FCF1-201ENST00000341162 IL16Q14005 1332 aa9.41□□□□□ -0.9
FCF1-201ENST00000341162 E9PSI1 815 aa9.4□□□□□ -0.9
FCF1-201ENST00000341162 IDI1Q13907 227 aa9.4□□□□□ -0.9
FCF1-201ENST00000341162 RGPD1P0DJD0 1748 aa9.4□□□□□ -0.9
FCF1-201ENST00000341162 WDR63Q8IWG1 891 aa9.4□□□□□ -0.9
FCF1-201ENST00000341162 PNNQ9H307 717 aaKnown RBP9.4□□□□□ -0.9
FCF1-201ENST00000341162 TNRQ92752 1358 aa9.4□□□□□ -0.9
FCF1-201ENST00000341162 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.91
FCF1-201ENST00000341162 PHRF1Q9P1Y6 1649 aaKnown RBP9.39□□□□□ -0.91
FCF1-201ENST00000341162 GGT6Q6P531 493 aa9.39□□□□□ -0.91
FCF1-201ENST00000341162 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
FCF1-201ENST00000341162 SLFN5Q08AF3 891 aa9.39□□□□□ -0.91
FCF1-201ENST00000341162 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
FCF1-201ENST00000341162 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
FCF1-201ENST00000341162 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
FCF1-201ENST00000341162 GOLGA2Q08379 1002 aa9.38□□□□□ -0.91
FCF1-201ENST00000341162 TERF2IPQ9NYB0 399 aa9.38□□□□□ -0.91
FCF1-201ENST00000341162 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
FCF1-201ENST00000341162 TMEM2Q9UHN6 1383 aa9.37□□□□□ -0.91
FCF1-201ENST00000341162 ANKARQ7Z5J8 1434 aa9.37□□□□□ -0.91
FCF1-201ENST00000341162 TCERG1O14776 1098 aaKnown RBP9.37□□□□□ -0.91
FCF1-201ENST00000341162 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
FCF1-201ENST00000341162 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
FCF1-201ENST00000341162 RUNDC1Q96C34 613 aa9.36□□□□□ -0.91
FCF1-201ENST00000341162 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
FCF1-201ENST00000341162 N4BP2Q86UW6 1770 aaPredicted RBP9.36□□□□□ -0.91
FCF1-201ENST00000341162 ADAMTS8Q9UP79 889 aa9.36□□□□□ -0.91
FCF1-201ENST00000341162 ADAMTSL3P82987 1691 aa9.36□□□□□ -0.91
FCF1-201ENST00000341162 POLR3GLQ9BT43 218 aa9.35□□□□□ -0.91
FCF1-201ENST00000341162 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
FCF1-201ENST00000341162 NWD1Q149M9 1564 aa9.35□□□□□ -0.91
FCF1-201ENST00000341162 KIF24Q5T7B8 1368 aa9.35□□□□□ -0.91
FCF1-201ENST00000341162 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
FCF1-201ENST00000341162 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.35□□□□□ -0.91
FCF1-201ENST00000341162 ZNF428Q96B54 188 aa9.34□□□□□ -0.91
FCF1-201ENST00000341162 PLPPR3Q6T4P5 718 aa9.34□□□□□ -0.91
FCF1-201ENST00000341162 CEP170BQ9Y4F5 1589 aaPredicted RBP9.33□□□□□ -0.92
FCF1-201ENST00000341162 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
FCF1-201ENST00000341162 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
FCF1-201ENST00000341162 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
FCF1-201ENST00000341162 HDGFL2Q7Z4V5 671 aaPredicted RBP9.32□□□□□ -0.92
FCF1-201ENST00000341162 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
FCF1-201ENST00000341162 CHD2O14647 1828 aaKnown RBP9.32□□□□□ -0.92
FCF1-201ENST00000341162 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
FCF1-201ENST00000341162 BRPF1P55201 1214 aaPredicted RBP9.32□□□□□ -0.92
FCF1-201ENST00000341162 PLEKHG2Q9H7P9 1386 aa9.32□□□□□ -0.92
FCF1-201ENST00000341162 MARF1Q9Y4F3 1742 aaKnown RBP9.32□□□□□ -0.92
FCF1-201ENST00000341162 ABCC6O95255 1503 aa9.31□□□□□ -0.92
FCF1-201ENST00000341162 CYB5RLQ6IPT4 315 aa9.31□□□□□ -0.92
FCF1-201ENST00000341162 CENPQQ7L2Z9 268 aaPredicted RBP9.31□□□□□ -0.92
FCF1-201ENST00000341162 SSH2Q76I76 1423 aa9.31□□□□□ -0.92
FCF1-201ENST00000341162 PTPRUQ92729 1446 aa9.31□□□□□ -0.92
FCF1-201ENST00000341162 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
FCF1-201ENST00000341162 CCDC136Q96JN2 1154 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms