RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 LMO7Q8WWI1 1683 aa7.6□□□□□ -1.19
PRPF4B-201ENST00000337659 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-201ENST00000337659 RIMS2Q9UQ26 1411 aa7.59□□□□□ -1.19
PRPF4B-201ENST00000337659 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-201ENST00000337659 RAPGEF3O95398 923 aa7.59□□□□□ -1.19
PRPF4B-201ENST00000337659 SSH2Q76I76 1423 aa7.59□□□□□ -1.19
PRPF4B-201ENST00000337659 LRRC37A3O60309 1634 aa7.58□□□□□ -1.2
PRPF4B-201ENST00000337659 TMEM2Q9UHN6 1383 aa7.58□□□□□ -1.2
PRPF4B-201ENST00000337659 PIK3C2AO00443 1686 aa7.58□□□□□ -1.2
PRPF4B-201ENST00000337659 ADAMTS7Q9UKP4 1686 aa7.58□□□□□ -1.2
PRPF4B-201ENST00000337659 TNRQ92752 1358 aa7.57□□□□□ -1.2
PRPF4B-201ENST00000337659 SOCS7O14512 581 aa7.57□□□□□ -1.2
PRPF4B-201ENST00000337659 NCOA3Q9Y6Q9 1424 aa7.57□□□□□ -1.2
PRPF4B-201ENST00000337659 MIER1Q8N108 512 aa7.57□□□□□ -1.2
PRPF4B-201ENST00000337659 ADGRF5Q8IZF2 1346 aa7.57□□□□□ -1.2
PRPF4B-201ENST00000337659 ALS2Q96Q42 1657 aa7.56□□□□□ -1.2
PRPF4B-201ENST00000337659 NKTRP30414 1462 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-201ENST00000337659 ANKARQ7Z5J8 1434 aa7.56□□□□□ -1.2
PRPF4B-201ENST00000337659 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
PRPF4B-201ENST00000337659 CFAP65Q6ZU64 1925 aaKnown RBP7.55□□□□□ -1.2
PRPF4B-201ENST00000337659 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
PRPF4B-201ENST00000337659 RNF123Q5XPI4 1314 aa7.54□□□□□ -1.2
PRPF4B-201ENST00000337659 ANKRD36BQ8N2N9 1353 aa7.54□□□□□ -1.2
PRPF4B-201ENST00000337659 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-201ENST00000337659 PTPRUQ92729 1446 aa7.54□□□□□ -1.2
PRPF4B-201ENST00000337659 PLEKHG2Q9H7P9 1386 aa7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 CDK12Q9NYV4 1490 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 DCAF11Q8TEB1 546 aa7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 ABCA3Q99758 1704 aa7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 PNPLA6Q8IY17 1366 aa7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 RALBP1Q15311 655 aa7.53□□□□□ -1.2
PRPF4B-201ENST00000337659 POLR3AO14802 1390 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 NBPF1Q3BBV0 1214 aa7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 PEAK1Q9H792 1746 aa7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 IDI1Q13907 227 aa7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 NCAPD2Q15021 1401 aa7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 SLIT3O75094 1523 aa7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 VGFO15240 615 aaPredicted RBP7.52□□□□□ -1.21
PRPF4B-201ENST00000337659 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-201ENST00000337659 RGPD8O14715 1765 aaPredicted RBP7.51□□□□□ -1.21
PRPF4B-201ENST00000337659 CARD11Q9BXL7 1154 aa7.51□□□□□ -1.21
PRPF4B-201ENST00000337659 DCCP43146 1447 aa7.51□□□□□ -1.21
PRPF4B-201ENST00000337659 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.5□□□□□ -1.21
PRPF4B-201ENST00000337659 ST20-MTHFSA0A0A6YYL1 179 aa7.5□□□□□ -1.21
PRPF4B-201ENST00000337659 CDCA8Q53HL2 280 aa7.5□□□□□ -1.21
PRPF4B-201ENST00000337659 MYBBP1AQ9BQG0 1328 aaKnown RBP7.5□□□□□ -1.21
PRPF4B-201ENST00000337659 ATAD2Q6PL18 1390 aa7.5□□□□□ -1.21
PRPF4B-201ENST00000337659 NHSL1Q5SYE7 1610 aa7.49□□□□□ -1.21
PRPF4B-201ENST00000337659 PARP4Q9UKK3 1724 aaKnown RBP7.49□□□□□ -1.21
PRPF4B-201ENST00000337659 AATKQ6ZMQ8 1374 aa7.49□□□□□ -1.21
PRPF4B-201ENST00000337659 SIPA1L3O60292 1781 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 COL22A1Q8NFW1 1626 aaPredicted RBP7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 COL18A1P39060 1754 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 OVOS2A0A0J9YW53 1432 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 OVOS2Q6IE36 1432 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 ZNF521Q96K83 1311 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 NFAT5O94916 1531 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 ZBED9Q6R2W3 1325 aa7.48□□□□□ -1.21
PRPF4B-201ENST00000337659 TMF1P82094 1093 aa7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 EDC4Q6P2E9 1401 aaKnown RBP7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 USP31Q70CQ4 1352 aa7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 WNK3Q9BYP7 1800 aa7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 CICQ96RK0 1608 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 CENPJQ9HC77 1338 aaPredicted RBP7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 METP08581 1390 aa7.47□□□□□ -1.21
PRPF4B-201ENST00000337659 PHF23Q9BUL5 403 aaPredicted RBP7.46□□□□□ -1.21
PRPF4B-201ENST00000337659 MAP2P11137 1827 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-201ENST00000337659 PLCH1Q4KWH8 1693 aa7.46□□□□□ -1.22
PRPF4B-201ENST00000337659 VIRMAQ69YN4 1812 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-201ENST00000337659 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 KIF24Q5T7B8 1368 aa7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 DLG5Q8TDM6 1919 aa7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 LTN1O94822 1766 aa7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 PPIP5K1Q6PFW1 1433 aa7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 NGEFQ8N5V2 710 aa7.45□□□□□ -1.22
PRPF4B-201ENST00000337659 TBX22Q9Y458 520 aa7.44□□□□□ -1.22
PRPF4B-201ENST00000337659 PKD1L3Q7Z443 1732 aa7.44□□□□□ -1.22
PRPF4B-201ENST00000337659 COL16A1Q07092 1604 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-201ENST00000337659 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
PRPF4B-201ENST00000337659 ERICH6BQ5W0A0 696 aa7.43□□□□□ -1.22
PRPF4B-201ENST00000337659 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-201ENST00000337659 ANP32CO43423 234 aa7.43□□□□□ -1.22
PRPF4B-201ENST00000337659 TRMT2AQ8IZ69 625 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-201ENST00000337659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.43□□□□□ -1.223e-7■■□□□ 13.9
PRPF4B-201ENST00000337659 DDX10Q13206 875 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-201ENST00000337659 PAPPAQ13219 1627 aa7.42□□□□□ -1.22
PRPF4B-201ENST00000337659 ROBO2Q9HCK4 1378 aa7.42□□□□□ -1.22
PRPF4B-201ENST00000337659 ADGRL3Q9HAR2 1447 aa7.42□□□□□ -1.22
PRPF4B-201ENST00000337659 A0A1W2PP64 1363 aa7.42□□□□□ -1.22
PRPF4B-201ENST00000337659 CARD14Q9BXL6 1004 aa7.41□□□□□ -1.22
PRPF4B-201ENST00000337659 KDM3BQ7LBC6 1761 aa7.41□□□□□ -1.22
PRPF4B-201ENST00000337659 NLRP13Q86W25 1043 aa7.41□□□□□ -1.22
PRPF4B-201ENST00000337659 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
PRPF4B-201ENST00000337659 KLHL34Q8N239 644 aa7.4□□□□□ -1.22
PRPF4B-201ENST00000337659 NSD3Q9BZ95 1437 aa7.4□□□□□ -1.22
PRPF4B-201ENST00000337659 SHANK3Q9BYB0 1731 aa7.4□□□□□ -1.23
PRPF4B-201ENST00000337659 EVC2Q86UK5 1308 aa7.4□□□□□ -1.23
PRPF4B-201ENST00000337659 NPHP4O75161 1426 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms