RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
SEC13-201ENST00000337354 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
SEC13-201ENST00000337354 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
SEC13-201ENST00000337354 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
SEC13-201ENST00000337354 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
SEC13-201ENST00000337354 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
SEC13-201ENST00000337354 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
SEC13-201ENST00000337354 CADPS2Q86UW7 1296 aa21.74■■□□□ 1.07
SEC13-201ENST00000337354 CENPJQ9HC77 1338 aaPredicted RBP21.73■■□□□ 1.07
SEC13-201ENST00000337354 ATF3P18847 181 aa21.72■■□□□ 1.07
SEC13-201ENST00000337354 ADGRL3Q9HAR2 1447 aa21.71■■□□□ 1.07
SEC13-201ENST00000337354 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
SEC13-201ENST00000337354 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEC13-201ENST00000337354 DCCP43146 1447 aa21.7■■□□□ 1.06
SEC13-201ENST00000337354 HSPA1LP34931 641 aa21.66■■□□□ 1.06
SEC13-201ENST00000337354 MINK1Q8N4C8 1332 aaPredicted RBP21.66■■□□□ 1.06
SEC13-201ENST00000337354 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
SEC13-201ENST00000337354 ST20-MTHFSA0A0A6YYL1 179 aa21.64■■□□□ 1.06
SEC13-201ENST00000337354 EIF4G2P78344 907 aaKnown RBP eCLIP21.64■■□□□ 1.06
SEC13-201ENST00000337354 USP47Q96K76 1375 aa21.64■■□□□ 1.06
SEC13-201ENST00000337354 PHLPP1O60346 1717 aa21.64■■□□□ 1.05
SEC13-201ENST00000337354 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
SEC13-201ENST00000337354 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
SEC13-201ENST00000337354 SBNO2Q9Y2G9 1366 aa21.62■■□□□ 1.05
SEC13-201ENST00000337354 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
SEC13-201ENST00000337354 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
SEC13-201ENST00000337354 CDC42BPGQ6DT37 1551 aa21.59■■□□□ 1.05
SEC13-201ENST00000337354 TESK2Q96S53 571 aa21.59■■□□□ 1.05
SEC13-201ENST00000337354 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
SEC13-201ENST00000337354 MST1RQ04912 1400 aa21.58■■□□□ 1.05
SEC13-201ENST00000337354 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
SEC13-201ENST00000337354 HSPA5P11021 654 aaKnown RBP21.55■■□□□ 1.04
SEC13-201ENST00000337354 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
SEC13-201ENST00000337354 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
SEC13-201ENST00000337354 TMF1P82094 1093 aa21.54■■□□□ 1.04
SEC13-201ENST00000337354 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
SEC13-201ENST00000337354 C1orf167Q5SNV9 1468 aa21.54■■□□□ 1.04
SEC13-201ENST00000337354 AHDC1Q5TGY3 1603 aaPredicted RBP21.54■■□□□ 1.04
SEC13-201ENST00000337354 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
SEC13-201ENST00000337354 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
SEC13-201ENST00000337354 NHSL1Q5SYE7 1610 aa21.53■■□□□ 1.04
SEC13-201ENST00000337354 FMN2Q9NZ56 1722 aa21.53■■□□□ 1.04
SEC13-201ENST00000337354 ESCO1Q5FWF5 840 aa21.52■■□□□ 1.04
SEC13-201ENST00000337354 NUDT16Q96DE0 195 aaKnown RBP21.52■■□□□ 1.04
SEC13-201ENST00000337354 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
SEC13-201ENST00000337354 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
SEC13-201ENST00000337354 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
SEC13-201ENST00000337354 BRINP3Q76B58 766 aa21.51■■□□□ 1.03
SEC13-201ENST00000337354 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
SEC13-201ENST00000337354 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
SEC13-201ENST00000337354 PRR36Q9H6K5 1346 aa21.48■■□□□ 1.03
SEC13-201ENST00000337354 TULP4Q9NRJ4 1543 aa21.47■■□□□ 1.03
SEC13-201ENST00000337354 QRICH2Q9H0J4 1663 aa21.47■■□□□ 1.03
SEC13-201ENST00000337354 PHF8Q9UPP1 1060 aa21.47■■□□□ 1.03
SEC13-201ENST00000337354 ATAD2Q6PL18 1390 aa21.46■■□□□ 1.03
SEC13-201ENST00000337354 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
SEC13-201ENST00000337354 PLEKHG3A1L390 1219 aa21.45■■□□□ 1.02
SEC13-201ENST00000337354 RGPD8O14715 1765 aaPredicted RBP21.45■■□□□ 1.02
SEC13-201ENST00000337354 SHPRHQ149N8 1683 aa21.44■■□□□ 1.02
SEC13-201ENST00000337354 ATP7BP35670 1465 aa21.43■■□□□ 1.02
SEC13-201ENST00000337354 KIF1AQ12756 1690 aa21.42■■□□□ 1.02
SEC13-201ENST00000337354 FOXO3O43524 673 aa21.42■■□□□ 1.02
SEC13-201ENST00000337354 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
SEC13-201ENST00000337354 CABP1Q9NZU7 370 aa21.42■■□□□ 1.02
SEC13-201ENST00000337354 NPHP3Q7Z494 1330 aa21.41■■□□□ 1.02
SEC13-201ENST00000337354 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
SEC13-201ENST00000337354 JCADQ9P266 1359 aa21.39■■□□□ 1.02
SEC13-201ENST00000337354 PSME1Q06323 249 aa21.39■■□□□ 1.02
SEC13-201ENST00000337354 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
SEC13-201ENST00000337354 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
SEC13-201ENST00000337354 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
SEC13-201ENST00000337354 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
SEC13-201ENST00000337354 SOS2Q07890 1332 aaPredicted RBP21.37■■□□□ 1.01
SEC13-201ENST00000337354 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
SEC13-201ENST00000337354 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
SEC13-201ENST00000337354 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
SEC13-201ENST00000337354 ACEP12821 1306 aa21.36■■□□□ 1.01
SEC13-201ENST00000337354 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
SEC13-201ENST00000337354 KRT28Q7Z3Y7 464 aa21.36■■□□□ 1.01
SEC13-201ENST00000337354 LRRC59Q96AG4 307 aaKnown RBP21.36■■□□□ 1.01
SEC13-201ENST00000337354 C11orf95C9JLR9 678 aaPredicted RBP21.35■■□□□ 1.01
SEC13-201ENST00000337354 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
SEC13-201ENST00000337354 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
SEC13-201ENST00000337354 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
SEC13-201ENST00000337354 HDGFL2Q7Z4V5 671 aaPredicted RBP21.32■■□□□ 1
SEC13-201ENST00000337354 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
SEC13-201ENST00000337354 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
SEC13-201ENST00000337354 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
SEC13-201ENST00000337354 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
SEC13-201ENST00000337354 SBNO1A3KN83 1393 aa21.29■■□□□ 1
SEC13-201ENST00000337354 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
SEC13-201ENST00000337354 PXDNQ92626 1479 aa21.29■■□□□ 1
SEC13-201ENST00000337354 LRP6O75581 1613 aa21.28■■□□□ 1
SEC13-201ENST00000337354 TOPAZ1Q8N9V7 1692 aa21.27■■□□□ 1
SEC13-201ENST00000337354 SPATA31A6Q5VVP1 1343 aa21.27■■□□□ 1
SEC13-201ENST00000337354 PNPLA6Q8IY17 1366 aa21.26■□□□□ 0.99
SEC13-201ENST00000337354 SPATA31A3Q5VYP0 1347 aa21.26■□□□□ 0.99
SEC13-201ENST00000337354 KTN1Q86UP2 1357 aaKnown RBP21.26■□□□□ 0.99
SEC13-201ENST00000337354 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
SEC13-201ENST00000337354 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms