RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
MSL3-202ENST00000337339 ZNF521Q96K83 1311 aa12.52□□□□□ -0.4
MSL3-202ENST00000337339 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.4
MSL3-202ENST00000337339 CABP1Q9NZU7 370 aa12.52□□□□□ -0.4
MSL3-202ENST00000337339 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.4
MSL3-202ENST00000337339 PIK3C2GO75747 1445 aa12.52□□□□□ -0.41
MSL3-202ENST00000337339 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 SOX12O15370 315 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 IGHDP01880 384 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 TERF2IPQ9NYB0 399 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 TET3O43151 1660 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 POGZQ7Z3K3 1410 aa12.51□□□□□ -0.41
MSL3-202ENST00000337339 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
MSL3-202ENST00000337339 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
MSL3-202ENST00000337339 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
MSL3-202ENST00000337339 CDK19Q9BWU1 502 aa12.49□□□□□ -0.41
MSL3-202ENST00000337339 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
MSL3-202ENST00000337339 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
MSL3-202ENST00000337339 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
MSL3-202ENST00000337339 HMOX1P09601 288 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 EFCAB6Q5THR3 1501 aa12.48□□□□□ -0.41
MSL3-202ENST00000337339 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
MSL3-202ENST00000337339 LAMC1P11047 1609 aa12.47□□□□□ -0.41
MSL3-202ENST00000337339 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
MSL3-202ENST00000337339 RIPK4P57078 832 aa12.47□□□□□ -0.41
MSL3-202ENST00000337339 SYNMO15061 1565 aa12.47□□□□□ -0.41
MSL3-202ENST00000337339 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
MSL3-202ENST00000337339 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.41
MSL3-202ENST00000337339 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.41
MSL3-202ENST00000337339 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
MSL3-202ENST00000337339 ABCA6Q8N139 1617 aa12.46□□□□□ -0.41
MSL3-202ENST00000337339 RLBP1P12271 317 aa12.46□□□□□ -0.41
MSL3-202ENST00000337339 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
MSL3-202ENST00000337339 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.42
MSL3-202ENST00000337339 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.42
MSL3-202ENST00000337339 TRMT2AQ8IZ69 625 aaKnown RBP12.46□□□□□ -0.42
MSL3-202ENST00000337339 MYOM2P54296 1465 aa12.45□□□□□ -0.42
MSL3-202ENST00000337339 KIDINS220Q9ULH0 1771 aa12.45□□□□□ -0.42
MSL3-202ENST00000337339 FYB1O15117 783 aa12.45□□□□□ -0.42
MSL3-202ENST00000337339 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
MSL3-202ENST00000337339 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
MSL3-202ENST00000337339 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
MSL3-202ENST00000337339 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
MSL3-202ENST00000337339 CEP152O94986 1710 aa12.45□□□□□ -0.42
MSL3-202ENST00000337339 IQGAP1P46940 1657 aa12.44□□□□□ -0.42
MSL3-202ENST00000337339 PDE3AQ14432 1141 aa12.44□□□□□ -0.42
MSL3-202ENST00000337339 INSRP06213 1382 aa12.44□□□□□ -0.42
MSL3-202ENST00000337339 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
MSL3-202ENST00000337339 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
MSL3-202ENST00000337339 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
MSL3-202ENST00000337339 KIF1BO60333 1816 aa12.43□□□□□ -0.42
MSL3-202ENST00000337339 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
MSL3-202ENST00000337339 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
MSL3-202ENST00000337339 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
MSL3-202ENST00000337339 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 MROH1Q8NDA8 1641 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
MSL3-202ENST00000337339 VWDEQ8N2E2 1590 aa12.41□□□□□ -0.42
MSL3-202ENST00000337339 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
MSL3-202ENST00000337339 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
MSL3-202ENST00000337339 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
MSL3-202ENST00000337339 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
MSL3-202ENST00000337339 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
MSL3-202ENST00000337339 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
MSL3-202ENST00000337339 ABCC3O15438 1527 aa12.4□□□□□ -0.42
MSL3-202ENST00000337339 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
MSL3-202ENST00000337339 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
MSL3-202ENST00000337339 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
MSL3-202ENST00000337339 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
MSL3-202ENST00000337339 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 NME9Q86XW9 330 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 NOB1Q9ULX3 412 aaKnown RBP12.39□□□□□ -0.43
MSL3-202ENST00000337339 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 SEC24BO95487 1268 aa12.39□□□□□ -0.43
MSL3-202ENST00000337339 ADGRB3O60242 1522 aa12.38□□□□□ -0.43
MSL3-202ENST00000337339 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
MSL3-202ENST00000337339 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
MSL3-202ENST00000337339 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
MSL3-202ENST00000337339 FRMPD1Q5SYB0 1578 aa12.36□□□□□ -0.43
MSL3-202ENST00000337339 ARXQ96QS3 562 aa12.36□□□□□ -0.43
MSL3-202ENST00000337339 TRIM27P14373 513 aa12.36□□□□□ -0.43
MSL3-202ENST00000337339 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
MSL3-202ENST00000337339 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
MSL3-202ENST00000337339 YTHDC2Q9H6S0 1430 aaKnown RBP12.35□□□□□ -0.43
MSL3-202ENST00000337339 MYOM1P52179 1685 aa12.35□□□□□ -0.43
MSL3-202ENST00000337339 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
MSL3-202ENST00000337339 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
MSL3-202ENST00000337339 PRKCSHP14314 528 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms