RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
SF1-202ENST00000334944 ZMYND15Q9H091 742 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 KIAA1210Q9ULL0 1709 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 ZNF521Q96K83 1311 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 BCAR3O75815 825 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 MLECQ14165 292 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 IFT172Q9UG01 1749 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 NRXN1Q9ULB1 1477 aa18.04■□□□□ 0.48
SF1-202ENST00000334944 FAM69CQ0P6D2 419 aa18.03■□□□□ 0.48
SF1-202ENST00000334944 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
SF1-202ENST00000334944 ARXQ96QS3 562 aa18.02■□□□□ 0.48
SF1-202ENST00000334944 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
SF1-202ENST00000334944 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
SF1-202ENST00000334944 MTHFSP49914 203 aa18.01■□□□□ 0.47
SF1-202ENST00000334944 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
SF1-202ENST00000334944 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
SF1-202ENST00000334944 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SF1-202ENST00000334944 PLEKHG5O94827 1062 aa18■□□□□ 0.47
SF1-202ENST00000334944 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
SF1-202ENST00000334944 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
SF1-202ENST00000334944 ADGRB1O14514 1584 aa17.99■□□□□ 0.47
SF1-202ENST00000334944 PPLO60437 1756 aa17.99■□□□□ 0.47
SF1-202ENST00000334944 INSRP06213 1382 aa17.99■□□□□ 0.47
SF1-202ENST00000334944 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
SF1-202ENST00000334944 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
SF1-202ENST00000334944 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
SF1-202ENST00000334944 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
SF1-202ENST00000334944 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
SF1-202ENST00000334944 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
SF1-202ENST00000334944 RPGRIP1LQ68CZ1 1315 aa17.97■□□□□ 0.47
SF1-202ENST00000334944 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
SF1-202ENST00000334944 QRICH2Q9H0J4 1663 aa17.96■□□□□ 0.47
SF1-202ENST00000334944 EVC2Q86UK5 1308 aa17.96■□□□□ 0.47
SF1-202ENST00000334944 NEO1Q92859 1461 aa17.96■□□□□ 0.47
SF1-202ENST00000334944 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
SF1-202ENST00000334944 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
SF1-202ENST00000334944 WWC1Q8IX03 1113 aa17.95■□□□□ 0.46
SF1-202ENST00000334944 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
SF1-202ENST00000334944 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
SF1-202ENST00000334944 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
SF1-202ENST00000334944 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
SF1-202ENST00000334944 RRAGDQ9NQL2 400 aaPredicted RBP17.94■□□□□ 0.46
SF1-202ENST00000334944 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
SF1-202ENST00000334944 POGKQ9P215 609 aa17.94■□□□□ 0.46
SF1-202ENST00000334944 GLI2P10070 1586 aa17.92■□□□□ 0.46
SF1-202ENST00000334944 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
SF1-202ENST00000334944 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
SF1-202ENST00000334944 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.464e-10■■■■■ 47.9
SF1-202ENST00000334944 E9PSI1 815 aa17.91■□□□□ 0.46
SF1-202ENST00000334944 FBLN1P23142 703 aa17.91■□□□□ 0.46
SF1-202ENST00000334944 TRMT2AQ8IZ69 625 aaKnown RBP17.91■□□□□ 0.46
SF1-202ENST00000334944 NEXMIFQ5QGS0 1516 aa17.91■□□□□ 0.46
SF1-202ENST00000334944 RGS3P49796 1198 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 SLC52A1Q9NWF4 448 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 MYO3AQ8NEV4 1616 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 TSPOAP1O95153 1857 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
SF1-202ENST00000334944 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
SF1-202ENST00000334944 GLIPR1L2Q4G1C9 344 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
SF1-202ENST00000334944 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
SF1-202ENST00000334944 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
SF1-202ENST00000334944 RICTORQ6R327 1708 aa17.89■□□□□ 0.45
SF1-202ENST00000334944 MYO5BQ9ULV0 1848 aa17.89■□□□□ 0.45
SF1-202ENST00000334944 NAP1L5Q96NT1 182 aaPredicted RBP17.89■□□□□ 0.45
SF1-202ENST00000334944 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
SF1-202ENST00000334944 TNNQ9UQP3 1299 aa17.88■□□□□ 0.45
SF1-202ENST00000334944 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
SF1-202ENST00000334944 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 A0A1W2PP64 1363 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
SF1-202ENST00000334944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
SF1-202ENST00000334944 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
SF1-202ENST00000334944 ANKRD36BQ8N2N9 1353 aa17.85■□□□□ 0.45
SF1-202ENST00000334944 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
SF1-202ENST00000334944 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
SF1-202ENST00000334944 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
SF1-202ENST00000334944 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
SF1-202ENST00000334944 CDK19Q9BWU1 502 aa17.83■□□□□ 0.45
SF1-202ENST00000334944 PODXL2Q9NZ53 605 aa17.83■□□□□ 0.44
SF1-202ENST00000334944 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
SF1-202ENST00000334944 ARHGAP31Q2M1Z3 1444 aa17.82■□□□□ 0.44
SF1-202ENST00000334944 MS4A1P11836 297 aa17.82■□□□□ 0.44
SF1-202ENST00000334944 FYB1O15117 783 aa17.82■□□□□ 0.44
SF1-202ENST00000334944 IGHDP01880 384 aa17.82■□□□□ 0.44
SF1-202ENST00000334944 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
SF1-202ENST00000334944 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SF1-202ENST00000334944 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
SF1-202ENST00000334944 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
SF1-202ENST00000334944 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
SF1-202ENST00000334944 PREX1Q8TCU6 1659 aa17.79■□□□□ 0.44
SF1-202ENST00000334944 RLBP1P12271 317 aa17.79■□□□□ 0.44
SF1-202ENST00000334944 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
SF1-202ENST00000334944 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
SF1-202ENST00000334944 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
SF1-202ENST00000334944 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms