RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 SIL1Q9H173 461 aa13.54□□□□□ -0.24
SREK1-202ENST00000334121 LRRFIP1Q32MZ4 808 aaKnown RBP13.54□□□□□ -0.24
SREK1-202ENST00000334121 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
SREK1-202ENST00000334121 CCDC47Q96A33 483 aaKnown RBP13.54□□□□□ -0.24
SREK1-202ENST00000334121 MYL6BP14649 208 aa13.53□□□□□ -0.24
SREK1-202ENST00000334121 CCDC85AQ96PX6 553 aaPredicted RBP13.53□□□□□ -0.24
SREK1-202ENST00000334121 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
SREK1-202ENST00000334121 DHX37Q8IY37 1157 aaKnown RBP13.53□□□□□ -0.24
SREK1-202ENST00000334121 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
SREK1-202ENST00000334121 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
SREK1-202ENST00000334121 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SREK1-202ENST00000334121 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
SREK1-202ENST00000334121 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
SREK1-202ENST00000334121 IPO7O95373 1038 aaKnown RBP13.52□□□□□ -0.25
SREK1-202ENST00000334121 HSP90AB2PQ58FF8 381 aa13.52□□□□□ -0.25
SREK1-202ENST00000334121 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
SREK1-202ENST00000334121 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
SREK1-202ENST00000334121 PDE4AP27815 886 aa13.51□□□□□ -0.25
SREK1-202ENST00000334121 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
SREK1-202ENST00000334121 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
SREK1-202ENST00000334121 E9PSI1 815 aa13.51□□□□□ -0.25
SREK1-202ENST00000334121 CNNM1Q9NRU3 951 aa13.5□□□□□ -0.25
SREK1-202ENST00000334121 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
SREK1-202ENST00000334121 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
SREK1-202ENST00000334121 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
SREK1-202ENST00000334121 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
SREK1-202ENST00000334121 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
SREK1-202ENST00000334121 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
SREK1-202ENST00000334121 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
SREK1-202ENST00000334121 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
SREK1-202ENST00000334121 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
SREK1-202ENST00000334121 STK3Q13188 491 aa13.48□□□□□ -0.25
SREK1-202ENST00000334121 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
SREK1-202ENST00000334121 PTPRGP23470 1445 aa13.48□□□□□ -0.25
SREK1-202ENST00000334121 RNF20Q5VTR2 975 aa13.48□□□□□ -0.25
SREK1-202ENST00000334121 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
SREK1-202ENST00000334121 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
SREK1-202ENST00000334121 USP47Q96K76 1375 aa13.48□□□□□ -0.25
SREK1-202ENST00000334121 OFD1O75665 1012 aa13.47□□□□□ -0.25
SREK1-202ENST00000334121 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
SREK1-202ENST00000334121 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
SREK1-202ENST00000334121 ZSCAN29Q8IWY8 852 aaPredicted RBP13.47□□□□□ -0.25
SREK1-202ENST00000334121 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.25
SREK1-202ENST00000334121 REC8O95072 547 aa13.46□□□□□ -0.26
SREK1-202ENST00000334121 WIZO95785 1651 aa13.46□□□□□ -0.26
SREK1-202ENST00000334121 SURF6O75683 361 aaKnown RBP13.46□□□□□ -0.26
SREK1-202ENST00000334121 TTC39AQ5SRH9 613 aa13.45□□□□□ -0.26
SREK1-202ENST00000334121 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
SREK1-202ENST00000334121 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
SREK1-202ENST00000334121 MPNDQ8N594 471 aa13.45□□□□□ -0.26
SREK1-202ENST00000334121 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
SREK1-202ENST00000334121 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
SREK1-202ENST00000334121 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
SREK1-202ENST00000334121 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
SREK1-202ENST00000334121 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
SREK1-202ENST00000334121 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
SREK1-202ENST00000334121 CABP4P57796 275 aa13.44□□□□□ -0.26
SREK1-202ENST00000334121 CDK5RAP3Q96JB5 506 aa13.44□□□□□ -0.26
SREK1-202ENST00000334121 SETQ01105 290 aaPredicted RBP13.43□□□□□ -0.26
SREK1-202ENST00000334121 ERC2O15083 957 aa13.43□□□□□ -0.26
SREK1-202ENST00000334121 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
SREK1-202ENST00000334121 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 MTHFSP49914 203 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 NUP133Q8WUM0 1156 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 API5Q9BZZ5 524 aaKnown RBP13.42□□□□□ -0.26
SREK1-202ENST00000334121 FAM13BQ9NYF5 915 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 UACAQ9BZF9 1416 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 PPM1FP49593 454 aaPredicted RBP13.42□□□□□ -0.26
SREK1-202ENST00000334121 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
SREK1-202ENST00000334121 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
SREK1-202ENST00000334121 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
SREK1-202ENST00000334121 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
SREK1-202ENST00000334121 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
SREK1-202ENST00000334121 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
SREK1-202ENST00000334121 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
SREK1-202ENST00000334121 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
SREK1-202ENST00000334121 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
SREK1-202ENST00000334121 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
SREK1-202ENST00000334121 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
SREK1-202ENST00000334121 RUFY1Q96T51 708 aa13.4□□□□□ -0.26
SREK1-202ENST00000334121 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
SREK1-202ENST00000334121 TSR2Q969E8 191 aaKnown RBP13.4□□□□□ -0.26
SREK1-202ENST00000334121 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.27
SREK1-202ENST00000334121 MPHOSPH10O00566 681 aaKnown RBP13.39□□□□□ -0.27
SREK1-202ENST00000334121 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
SREK1-202ENST00000334121 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
SREK1-202ENST00000334121 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
SREK1-202ENST00000334121 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
SREK1-202ENST00000334121 SMC2O95347 1197 aa13.39□□□□□ -0.27
SREK1-202ENST00000334121 GNAI1P63096 354 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms