RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KIAA1210Q9ULL0 1709 aa30.15■■■□□ 2.42
TSKU-201ENST00000333090 KANK1Q14678 1352 aa30.15■■■□□ 2.42
TSKU-201ENST00000333090 TBC1D32Q96NH3 1257 aa30.15■■■□□ 2.42
TSKU-201ENST00000333090 ATP7AQ04656 1500 aa30.14■■■□□ 2.42
TSKU-201ENST00000333090 RTEL1-TNFRSF6BF6WH68 1400 aa30.14■■■□□ 2.42
TSKU-201ENST00000333090 ASXL2Q76L83 1435 aa30.13■■■□□ 2.41
TSKU-201ENST00000333090 TBC1D2Q9BYX2 928 aa30.12■■■□□ 2.41
TSKU-201ENST00000333090 AAMPQ13685 434 aa30.11■■■□□ 2.41
TSKU-201ENST00000333090 TET3O43151 1660 aa30.11■■■□□ 2.41
TSKU-201ENST00000333090 NSD3Q9BZ95 1437 aa30.11■■■□□ 2.41
TSKU-201ENST00000333090 ABCA6Q8N139 1617 aa30.11■■■□□ 2.41
TSKU-201ENST00000333090 MAP3K4Q9Y6R4 1608 aa30.1■■■□□ 2.41
TSKU-201ENST00000333090 RWDD1Q9H446 243 aaPredicted RBP30.09■■■□□ 2.41
TSKU-201ENST00000333090 SPRYD3Q8NCJ5 442 aa30.08■■■□□ 2.41
TSKU-201ENST00000333090 SLC12A5Q9H2X9 1139 aa30.07■■■□□ 2.4
TSKU-201ENST00000333090 GGT6Q6P531 493 aa30.07■■■□□ 2.4
TSKU-201ENST00000333090 WDR63Q8IWG1 891 aa30.07■■■□□ 2.4
TSKU-201ENST00000333090 DEPDC5O75140 1603 aa30.06■■■□□ 2.4
TSKU-201ENST00000333090 ARXQ96QS3 562 aa30.06■■■□□ 2.4
TSKU-201ENST00000333090 MYOM2P54296 1465 aa30.06■■■□□ 2.4
TSKU-201ENST00000333090 L1TD1Q5T7N2 865 aaKnown RBP30.06■■■□□ 2.4
TSKU-201ENST00000333090 PHF23Q9BUL5 403 aaPredicted RBP30.06■■■□□ 2.4
TSKU-201ENST00000333090 SHPRHQ149N8 1683 aa30.05■■■□□ 2.4
TSKU-201ENST00000333090 NUTM2DQ5VT03 806 aaPredicted RBP30.03■■■□□ 2.4
TSKU-201ENST00000333090 RSPH6AQ9H0K4 717 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 IQSEC2Q5JU85 1478 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 MTHFSP49914 203 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 TRAK1Q9UPV9 953 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 ABCA9Q8IUA7 1624 aa30.03■■■□□ 2.4
TSKU-201ENST00000333090 INO80Q9ULG1 1556 aaPredicted RBP30.02■■■□□ 2.4
TSKU-201ENST00000333090 SBNO2Q9Y2G9 1366 aa30.02■■■□□ 2.4
TSKU-201ENST00000333090 MVPQ14764 893 aaKnown RBP29.99■■■□□ 2.39
TSKU-201ENST00000333090 FTSJ3Q8IY81 847 aaKnown RBP29.99■■■□□ 2.39
TSKU-201ENST00000333090 MYH16Q9H6N6 1097 aa29.99■■■□□ 2.39
TSKU-201ENST00000333090 CFAP53Q96M91 514 aa29.98■■■□□ 2.39
TSKU-201ENST00000333090 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
TSKU-201ENST00000333090 CFAP65Q6ZU64 1925 aaKnown RBP29.98■■■□□ 2.39
TSKU-201ENST00000333090 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
TSKU-201ENST00000333090 NEURL4Q96JN8 1562 aa29.97■■■□□ 2.39
TSKU-201ENST00000333090 MROH1Q8NDA8 1641 aa29.96■■■□□ 2.39
TSKU-201ENST00000333090 CCDC27Q2M243 656 aa29.96■■■□□ 2.39
TSKU-201ENST00000333090 RRAGDQ9NQL2 400 aaPredicted RBP29.96■■■□□ 2.39
TSKU-201ENST00000333090 GZF1Q9H116 711 aaPredicted RBP29.95■■■□□ 2.39
TSKU-201ENST00000333090 NPM1P06748 294 aaKnown RBP eCLIP29.95■■■□□ 2.38
TSKU-201ENST00000333090 MFAP1P55081 439 aaKnown RBP29.95■■■□□ 2.38
TSKU-201ENST00000333090 ZKSCAN2Q63HK3 967 aa29.95■■■□□ 2.38
TSKU-201ENST00000333090 TMEM132EQ6IEE7 984 aa29.95■■■□□ 2.38
TSKU-201ENST00000333090 U2AF1L5P0DN76 240 aaPredicted RBP29.94■■■□□ 2.38
TSKU-201ENST00000333090 U2AF1Q01081 240 aaKnown RBP eCLIP29.94■■■□□ 2.38
TSKU-201ENST00000333090 MCM4P33991 863 aa29.94■■■□□ 2.38
TSKU-201ENST00000333090 DZIP1LQ8IYY4 767 aaKnown RBP29.94■■■□□ 2.38
TSKU-201ENST00000333090 C22orf23Q9BZE7 217 aa29.94■■■□□ 2.38
TSKU-201ENST00000333090 NOS1P29475 1434 aa29.93■■■□□ 2.38
TSKU-201ENST00000333090 MYO3AQ8NEV4 1616 aa29.93■■■□□ 2.38
TSKU-201ENST00000333090 KIF1BO60333 1816 aa29.93■■■□□ 2.38
TSKU-201ENST00000333090 RAPGEF3O95398 923 aa29.93■■■□□ 2.38
TSKU-201ENST00000333090 ZNF518AQ6AHZ1 1483 aa29.93■■■□□ 2.38
TSKU-201ENST00000333090 GOLGA6L3A6NEY3 463 aa29.92■■■□□ 2.38
TSKU-201ENST00000333090 TSR2Q969E8 191 aaKnown RBP29.9■■■□□ 2.38
TSKU-201ENST00000333090 XRCC6P12956 609 aaKnown RBP eCLIP29.9■■■□□ 2.38
TSKU-201ENST00000333090 KIDINS220Q9ULH0 1771 aa29.89■■■□□ 2.38
TSKU-201ENST00000333090 NRXN1Q9ULB1 1477 aa29.88■■■□□ 2.37
TSKU-201ENST00000333090 SMC4Q9NTJ3 1288 aa29.88■■■□□ 2.37
TSKU-201ENST00000333090 MROH2AA6NES4 1674 aa29.88■■■□□ 2.37
TSKU-201ENST00000333090 CHMP5Q9NZZ3 219 aa29.87■■■□□ 2.37
TSKU-201ENST00000333090 IFT172Q9UG01 1749 aa29.87■■■□□ 2.37
TSKU-201ENST00000333090 PPRC1Q5VV67 1664 aaKnown RBP29.86■■■□□ 2.37
TSKU-201ENST00000333090 OSCARQ8IYS5 282 aa29.86■■■□□ 2.37
TSKU-201ENST00000333090 ITPRIPQ8IWB1 547 aa29.85■■■□□ 2.37
TSKU-201ENST00000333090 CD109Q6YHK3 1445 aa29.84■■■□□ 2.37
TSKU-201ENST00000333090 FSD2A1L4K1 749 aa29.84■■■□□ 2.37
TSKU-201ENST00000333090 TRIM27P14373 513 aa29.84■■■□□ 2.37
TSKU-201ENST00000333090 PANK2Q9BZ23 570 aa29.84■■■□□ 2.37
TSKU-201ENST00000333090 EFCAB6Q5THR3 1501 aa29.83■■■□□ 2.37
TSKU-201ENST00000333090 EXOSC9Q06265 439 aaKnown RBP29.83■■■□□ 2.37
TSKU-201ENST00000333090 UBE2Q2Q8WVN8 375 aa29.83■■■□□ 2.37
TSKU-201ENST00000333090 C14orf93Q9H972 538 aaKnown RBP29.82■■■□□ 2.36
TSKU-201ENST00000333090 TRAK2O60296 914 aa29.82■■■□□ 2.36
TSKU-201ENST00000333090 QRICH2Q9H0J4 1663 aa29.81■■■□□ 2.36
TSKU-201ENST00000333090 SETBP1Q9Y6X0 1596 aa29.81■■■□□ 2.36
TSKU-201ENST00000333090 HDAC1Q13547 482 aaPredicted RBP29.8■■■□□ 2.36
TSKU-201ENST00000333090 HSCBQ8IWL3 235 aa29.8■■■□□ 2.36
TSKU-201ENST00000333090 SSH1Q8WYL5 1049 aa29.8■■■□□ 2.36
TSKU-201ENST00000333090 DDX19BQ9UMR2 479 aa29.8■■■□□ 2.36
TSKU-201ENST00000333090 NPATQ14207 1427 aa29.79■■■□□ 2.36
TSKU-201ENST00000333090 CT47B1P0C2W7 299 aaPredicted RBP29.79■■■□□ 2.36
TSKU-201ENST00000333090 SAFB2Q14151 953 aaKnown RBP eCLIP29.78■■■□□ 2.36
TSKU-201ENST00000333090 U2SURPO15042 1029 aaKnown RBP29.78■■■□□ 2.36
TSKU-201ENST00000333090 NCBP3Q53F19 620 aaKnown RBP29.78■■■□□ 2.36
TSKU-201ENST00000333090 ATF7IPQ6VMQ6 1270 aa29.77■■■□□ 2.36
TSKU-201ENST00000333090 ADGRB3O60242 1522 aa29.75■■■□□ 2.35
TSKU-201ENST00000333090 ZC3H13Q5T200 1668 aaKnown RBP29.75■■■□□ 2.35
TSKU-201ENST00000333090 NOB1Q9ULX3 412 aaKnown RBP29.74■■■□□ 2.35
TSKU-201ENST00000333090 USP32Q8NFA0 1604 aa29.74■■■□□ 2.35
TSKU-201ENST00000333090 SMC5Q8IY18 1101 aa29.73■■■□□ 2.35
TSKU-201ENST00000333090 ADGRB1O14514 1584 aa29.73■■■□□ 2.35
TSKU-201ENST00000333090 TMPOP42166 694 aaKnown RBP29.73■■■□□ 2.35
TSKU-201ENST00000333090 EVC2Q86UK5 1308 aa29.72■■■□□ 2.35
TSKU-201ENST00000333090 ANKRD36BQ8N2N9 1353 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms