RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 QRICH2Q9H0J4 1663 aa13.1□□□□□ -0.31
RARB-201ENST00000330688 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
RARB-201ENST00000330688 IDI1Q13907 227 aa13.09□□□□□ -0.31
RARB-201ENST00000330688 NEO1Q92859 1461 aa13.09□□□□□ -0.31
RARB-201ENST00000330688 ZC3H13Q5T200 1668 aaKnown RBP13.09□□□□□ -0.31
RARB-201ENST00000330688 CAMSAP1Q5T5Y3 1602 aa13.08□□□□□ -0.32
RARB-201ENST00000330688 MTHFSP49914 203 aa13.08□□□□□ -0.32
RARB-201ENST00000330688 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
RARB-201ENST00000330688 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
RARB-201ENST00000330688 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
RARB-201ENST00000330688 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
RARB-201ENST00000330688 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
RARB-201ENST00000330688 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
RARB-201ENST00000330688 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
RARB-201ENST00000330688 GLI2P10070 1586 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
RARB-201ENST00000330688 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
RARB-201ENST00000330688 TULP4Q9NRJ4 1543 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
RARB-201ENST00000330688 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
RARB-201ENST00000330688 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
RARB-201ENST00000330688 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
RARB-201ENST00000330688 DEKP35659 375 aaKnown RBP13.03□□□□□ -0.32
RARB-201ENST00000330688 SLC52A1Q9NWF4 448 aa13.03□□□□□ -0.32
RARB-201ENST00000330688 STK26Q9P289 416 aa13.03□□□□□ -0.32
RARB-201ENST00000330688 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
RARB-201ENST00000330688 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
RARB-201ENST00000330688 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.32
RARB-201ENST00000330688 IQSEC2Q5JU85 1478 aa13.02□□□□□ -0.32
RARB-201ENST00000330688 CFAP53Q96M91 514 aa13.02□□□□□ -0.32
RARB-201ENST00000330688 IGHDP01880 384 aa13.02□□□□□ -0.33
RARB-201ENST00000330688 C8orf34Q49A92 452 aa13.02□□□□□ -0.33
RARB-201ENST00000330688 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
RARB-201ENST00000330688 ZFYVE9O95405 1425 aa13.01□□□□□ -0.33
RARB-201ENST00000330688 RGS3P49796 1198 aa13.01□□□□□ -0.33
RARB-201ENST00000330688 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
RARB-201ENST00000330688 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RARB-201ENST00000330688 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
RARB-201ENST00000330688 COG6Q9Y2V7 657 aa13.01□□□□□ -0.33
RARB-201ENST00000330688 NSD2O96028 1365 aa13□□□□□ -0.33
RARB-201ENST00000330688 RICTORQ6R327 1708 aa13□□□□□ -0.33
RARB-201ENST00000330688 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
RARB-201ENST00000330688 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
RARB-201ENST00000330688 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
RARB-201ENST00000330688 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
RARB-201ENST00000330688 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
RARB-201ENST00000330688 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
RARB-201ENST00000330688 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
RARB-201ENST00000330688 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
RARB-201ENST00000330688 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
RARB-201ENST00000330688 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
RARB-201ENST00000330688 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
RARB-201ENST00000330688 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
RARB-201ENST00000330688 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
RARB-201ENST00000330688 RLBP1P12271 317 aa12.97□□□□□ -0.33
RARB-201ENST00000330688 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
RARB-201ENST00000330688 PTPRMP28827 1452 aa12.96□□□□□ -0.33
RARB-201ENST00000330688 TMEM131LA2VDJ0 1609 aa12.96□□□□□ -0.34
RARB-201ENST00000330688 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.34
RARB-201ENST00000330688 FYB1O15117 783 aa12.95□□□□□ -0.34
RARB-201ENST00000330688 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
RARB-201ENST00000330688 POGKQ9P215 609 aa12.95□□□□□ -0.34
RARB-201ENST00000330688 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
RARB-201ENST00000330688 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
RARB-201ENST00000330688 MYO5BQ9ULV0 1848 aa12.94□□□□□ -0.34
RARB-201ENST00000330688 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
RARB-201ENST00000330688 PREX1Q8TCU6 1659 aa12.94□□□□□ -0.34
RARB-201ENST00000330688 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
RARB-201ENST00000330688 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
RARB-201ENST00000330688 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
RARB-201ENST00000330688 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
RARB-201ENST00000330688 CD163L1Q9NR16 1453 aa12.93□□□□□ -0.34
RARB-201ENST00000330688 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
RARB-201ENST00000330688 NEFMP07197 916 aa12.92□□□□□ -0.34
RARB-201ENST00000330688 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
RARB-201ENST00000330688 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
RARB-201ENST00000330688 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
RARB-201ENST00000330688 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
RARB-201ENST00000330688 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
RARB-201ENST00000330688 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
RARB-201ENST00000330688 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
RARB-201ENST00000330688 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
RARB-201ENST00000330688 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
RARB-201ENST00000330688 CABP1Q9NZU7 370 aa12.91□□□□□ -0.34
RARB-201ENST00000330688 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
RARB-201ENST00000330688 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
RARB-201ENST00000330688 AAMPQ13685 434 aa12.9□□□□□ -0.35
RARB-201ENST00000330688 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
RARB-201ENST00000330688 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
RARB-201ENST00000330688 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms