RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 SIRT1Q96EB6 747 aa31.34■■■□□ 2.61
TNRC18-201ENST00000328270 C1orf167Q5SNV9 1468 aa31.33■■■□□ 2.61
TNRC18-201ENST00000328270 NHSL1Q5SYE7 1610 aa31.32■■■□□ 2.6
TNRC18-201ENST00000328270 DISP3Q9P2K9 1392 aa31.31■■■□□ 2.6
TNRC18-201ENST00000328270 NEUROD1Q13562 356 aa31.31■■■□□ 2.6
TNRC18-201ENST00000328270 FMN2Q9NZ56 1722 aa31.29■■■□□ 2.6
TNRC18-201ENST00000328270 L3MBTL2Q969R5 705 aa31.28■■■□□ 2.6
TNRC18-201ENST00000328270 PRAM1Q96QH2 718 aa31.27■■■□□ 2.6
TNRC18-201ENST00000328270 ARHGEF28Q8N1W1 1705 aaKnown RBP31.27■■■□□ 2.6
TNRC18-201ENST00000328270 TRAK1Q9UPV9 953 aa31.26■■■□□ 2.59
TNRC18-201ENST00000328270 SAFB2Q14151 953 aaKnown RBP eCLIP31.23■■■□□ 2.59
TNRC18-201ENST00000328270 POGKQ9P215 609 aa31.23■■■□□ 2.59
TNRC18-201ENST00000328270 JCADQ9P266 1359 aa31.21■■■□□ 2.59
TNRC18-201ENST00000328270 ORAI2Q96SN7 254 aa31.2■■■□□ 2.59
TNRC18-201ENST00000328270 ADGRB2O60241 1585 aa31.2■■■□□ 2.58
TNRC18-201ENST00000328270 RGPD8O14715 1765 aaPredicted RBP31.19■■■□□ 2.58
TNRC18-201ENST00000328270 SHPRHQ149N8 1683 aa31.19■■■□□ 2.58
TNRC18-201ENST00000328270 DDX17Q92841 729 aaKnown RBP31.17■■■□□ 2.58
TNRC18-201ENST00000328270 TRPM1Q7Z4N2 1603 aa31.16■■■□□ 2.58
TNRC18-201ENST00000328270 NUTM2FA1L443 756 aa31.16■■■□□ 2.58
TNRC18-201ENST00000328270 NBPF1Q3BBV0 1214 aa31.16■■■□□ 2.58
TNRC18-201ENST00000328270 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
TNRC18-201ENST00000328270 ESCO1Q5FWF5 840 aa31.13■■■□□ 2.57
TNRC18-201ENST00000328270 KIF1AQ12756 1690 aa31.11■■■□□ 2.57
TNRC18-201ENST00000328270 MINK1Q8N4C8 1332 aaPredicted RBP31.11■■■□□ 2.57
TNRC18-201ENST00000328270 USP32Q8NFA0 1604 aa31.09■■■□□ 2.57
TNRC18-201ENST00000328270 TONSLQ96HA7 1378 aa31.09■■■□□ 2.57
TNRC18-201ENST00000328270 HIRIP3Q9BW71 556 aaPredicted RBP31.09■■■□□ 2.57
TNRC18-201ENST00000328270 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
TNRC18-201ENST00000328270 SOS2Q07890 1332 aaPredicted RBP31.06■■■□□ 2.56
TNRC18-201ENST00000328270 LRRC59Q96AG4 307 aaKnown RBP31.06■■■□□ 2.56
TNRC18-201ENST00000328270 SPATA31A6Q5VVP1 1343 aa31.05■■■□□ 2.56
TNRC18-201ENST00000328270 ANKARQ7Z5J8 1434 aa31.05■■■□□ 2.56
TNRC18-201ENST00000328270 NPHP3Q7Z494 1330 aa31.04■■■□□ 2.56
TNRC18-201ENST00000328270 LRP6O75581 1613 aa31.02■■■□□ 2.56
TNRC18-201ENST00000328270 PXDNQ92626 1479 aa31.02■■■□□ 2.56
TNRC18-201ENST00000328270 TULP4Q9NRJ4 1543 aa31.02■■■□□ 2.56
TNRC18-201ENST00000328270 EIF3AQ14152 1382 aaKnown RBP31.02■■■□□ 2.56
TNRC18-201ENST00000328270 QRICH2Q9H0J4 1663 aa31.01■■■□□ 2.55
TNRC18-201ENST00000328270 FOXO3O43524 673 aa31.01■■■□□ 2.55
TNRC18-201ENST00000328270 NBPF8Q3BBV2 869 aa31.01■■■□□ 2.55
TNRC18-201ENST00000328270 PNPLA6Q8IY17 1366 aa31.01■■■□□ 2.55
TNRC18-201ENST00000328270 WASLO00401 505 aaPredicted RBP31■■■□□ 2.55
TNRC18-201ENST00000328270 ROCK2O75116 1388 aaKnown RBP31■■■□□ 2.55
TNRC18-201ENST00000328270 ILDR2Q71H61 639 aa30.98■■■□□ 2.55
TNRC18-201ENST00000328270 PHF8Q9UPP1 1060 aa30.98■■■□□ 2.55
TNRC18-201ENST00000328270 XPCQ01831 940 aaPredicted RBP30.97■■■□□ 2.55
TNRC18-201ENST00000328270 ITSN1Q15811 1721 aa30.97■■■□□ 2.55
TNRC18-201ENST00000328270 PRR36Q9H6K5 1346 aa30.96■■■□□ 2.55
TNRC18-201ENST00000328270 CENPJQ9HC77 1338 aaPredicted RBP30.96■■■□□ 2.55
TNRC18-201ENST00000328270 COL22A1Q8NFW1 1626 aaPredicted RBP30.94■■■□□ 2.54
TNRC18-201ENST00000328270 NUTM2BA6NNL0 878 aaPredicted RBP30.93■■■□□ 2.54
TNRC18-201ENST00000328270 NUTM2EB1AL46 878 aaPredicted RBP30.93■■■□□ 2.54
TNRC18-201ENST00000328270 NUTM2AQ8IVF1 878 aaPredicted RBP30.93■■■□□ 2.54
TNRC18-201ENST00000328270 GPRASP1Q5JY77 1395 aa30.92■■■□□ 2.54
TNRC18-201ENST00000328270 ATP7BP35670 1465 aa30.92■■■□□ 2.54
TNRC18-201ENST00000328270 RALGAPBQ86X10 1494 aa30.92■■■□□ 2.54
TNRC18-201ENST00000328270 MEX3CQ5U5Q3 659 aaKnown RBP30.9■■■□□ 2.54
TNRC18-201ENST00000328270 RGS17Q9UGC6 210 aaPredicted RBP30.9■■■□□ 2.54
TNRC18-201ENST00000328270 PMFBP1Q8TBY8 1022 aa30.89■■■□□ 2.54
TNRC18-201ENST00000328270 CDK19Q9BWU1 502 aa30.89■■■□□ 2.54
TNRC18-201ENST00000328270 TOPAZ1Q8N9V7 1692 aa30.89■■■□□ 2.54
TNRC18-201ENST00000328270 KRT28Q7Z3Y7 464 aa30.88■■■□□ 2.53
TNRC18-201ENST00000328270 CLSPNQ9HAW4 1339 aa30.88■■■□□ 2.53
TNRC18-201ENST00000328270 NUDT16Q96DE0 195 aaKnown RBP30.85■■■□□ 2.53
TNRC18-201ENST00000328270 SPATA31A3Q5VYP0 1347 aa30.84■■■□□ 2.53
TNRC18-201ENST00000328270 TRPM3Q9HCF6 1732 aaPredicted RBP30.84■■■□□ 2.53
TNRC18-201ENST00000328270 PSME1Q06323 249 aa30.83■■■□□ 2.53
TNRC18-201ENST00000328270 CARD11Q9BXL7 1154 aa30.82■■■□□ 2.52
TNRC18-201ENST00000328270 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
TNRC18-201ENST00000328270 SBNO1A3KN83 1393 aa30.8■■■□□ 2.52
TNRC18-201ENST00000328270 MARF1Q9Y4F3 1742 aaKnown RBP30.79■■■□□ 2.52
TNRC18-201ENST00000328270 SRPK2P78362 688 aaKnown RBP30.78■■■□□ 2.52
TNRC18-201ENST00000328270 NGDNQ8NEJ9 315 aaKnown RBP30.78■■■□□ 2.52
TNRC18-201ENST00000328270 CCDC61Q9Y6R9 512 aa30.77■■■□□ 2.52
TNRC18-201ENST00000328270 ADAMTS2O95450 1211 aa30.76■■■□□ 2.51
TNRC18-201ENST00000328270 POTEAQ6S8J7 498 aa30.76■■■□□ 2.51
TNRC18-201ENST00000328270 CCER1Q8TC90 406 aaPredicted RBP30.76■■■□□ 2.51
TNRC18-201ENST00000328270 ALS2Q96Q42 1657 aa30.76■■■□□ 2.51
TNRC18-201ENST00000328270 CABP2Q9NPB3 220 aa30.75■■■□□ 2.51
TNRC18-201ENST00000328270 ABCA3Q99758 1704 aa30.74■■■□□ 2.51
TNRC18-201ENST00000328270 C8orf37Q96NL8 207 aa30.74■■■□□ 2.51
TNRC18-201ENST00000328270 EVC2Q86UK5 1308 aa30.73■■■□□ 2.51
TNRC18-201ENST00000328270 AFF2P51816 1311 aa30.73■■■□□ 2.51
TNRC18-201ENST00000328270 ARHGEF10O15013 1369 aa30.72■■■□□ 2.51
TNRC18-201ENST00000328270 TIMELESSQ9UNS1 1208 aa30.72■■■□□ 2.51
TNRC18-201ENST00000328270 POLR3AO14802 1390 aaPredicted RBP30.71■■■□□ 2.51
TNRC18-201ENST00000328270 ZNF772Q68DY9 489 aaPredicted RBP30.71■■■□□ 2.51
TNRC18-201ENST00000328270 LMOD2Q6P5Q4 547 aa30.71■■■□□ 2.51
TNRC18-201ENST00000328270 PPIP5K1Q6PFW1 1433 aa30.71■■■□□ 2.51
TNRC18-201ENST00000328270 SBNO2Q9Y2G9 1366 aa30.7■■■□□ 2.51
TNRC18-201ENST00000328270 PLEKHG3A1L390 1219 aa30.7■■■□□ 2.51
TNRC18-201ENST00000328270 ACEP12821 1306 aa30.69■■■□□ 2.5
TNRC18-201ENST00000328270 NGLY1Q96IV0 654 aa30.66■■■□□ 2.5
TNRC18-201ENST00000328270 PAK3O75914 559 aaPredicted RBP30.64■■■□□ 2.5
TNRC18-201ENST00000328270 SOCS7O14512 581 aa30.63■■■□□ 2.49
TNRC18-201ENST00000328270 PLEKHG5O94827 1062 aa30.63■■■□□ 2.49
TNRC18-201ENST00000328270 CABLES1Q8TDN4 633 aa30.63■■■□□ 2.49
TNRC18-201ENST00000328270 CRYBG1Q9Y4K1 1723 aa30.63■■■□□ 2.49
TNRC18-201ENST00000328270 HAP1P54257 671 aaPredicted RBP30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms