RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 PANK3Q9H999 370 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 CHMP3Q9Y3E7 222 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
ZKSCAN1-201ENST00000324306 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 PRDM2Q13029 1718 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 FOXD1Q16676 465 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 MCM3P25205 808 aa11.28□□□□□ -0.6
ZKSCAN1-201ENST00000324306 DDX11Q96FC9 970 aa11.27□□□□□ -0.6
ZKSCAN1-201ENST00000324306 PLIN1O60240 522 aa11.27□□□□□ -0.6
ZKSCAN1-201ENST00000324306 DACH1Q9UI36 760 aa11.27□□□□□ -0.6
ZKSCAN1-201ENST00000324306 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 TRDNQ13061 729 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 FGD6Q6ZV73 1430 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
ZKSCAN1-201ENST00000324306 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 AXDND1Q5T1B0 1012 aaPredicted RBP11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ST20-MTHFSA0A0A6YYL1 179 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 FILIP1LQ4L180 1135 aa11.26□□□□□ -0.61
ZKSCAN1-201ENST00000324306 XBP1P17861 261 aa11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 GNAI1P63096 354 aa11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
ZKSCAN1-201ENST00000324306 NAP1L1P55209 391 aaKnown RBP11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ANKRD18AQ8IVF6 992 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ERICH2A1L162 156 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 CNTROBQ8N137 903 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 EFCAB2Q5VUJ9 269 aa11.24□□□□□ -0.61
ZKSCAN1-201ENST00000324306 SMC2O95347 1197 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 EPS15P42566 896 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 GIMAP7Q8NHV1 300 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
ZKSCAN1-201ENST00000324306 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 K7ELQ4 463 aaPredicted RBP11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 DYNC1I1O14576 645 aa11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
ZKSCAN1-201ENST00000324306 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
ZKSCAN1-201ENST00000324306 PDILTQ8N807 584 aa11.21□□□□□ -0.61
ZKSCAN1-201ENST00000324306 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.61
ZKSCAN1-201ENST00000324306 C9orf78Q9NZ63 289 aaPredicted RBP11.21□□□□□ -0.61
ZKSCAN1-201ENST00000324306 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.61
ZKSCAN1-201ENST00000324306 COG3Q96JB2 828 aa11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 FOXD4L6Q3SYB3 417 aaPredicted RBP11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 VPS53Q5VIR6 699 aa11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 FOXD4L3Q6VB84 417 aaPredicted RBP11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 HECW1Q76N89 1606 aa11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 NEMFO60524 1076 aa11.21□□□□□ -0.62
ZKSCAN1-201ENST00000324306 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 SAFB2Q14151 953 aaKnown RBP eCLIP11.2□□□□□ -0.626e-7■■□□□ 11.9
ZKSCAN1-201ENST00000324306 LRRCC1Q9C099 1032 aa11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 DHX29Q7Z478 1369 aaKnown RBP11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 MICALCLQ6ZW33 695 aa11.2□□□□□ -0.62
ZKSCAN1-201ENST00000324306 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 TXLNAP40222 546 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 RBM10P98175 930 aaKnown RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 TNMDQ9H2S6 317 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 SENP3Q9H4L4 574 aaPredicted RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 CEP57L1Q8IYX8 460 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 PRPF40AO75400 957 aaKnown RBP11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 AMPHP49418 695 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 ODF2Q5BJF6 829 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 PPFIBP1Q86W92 1011 aa11.19□□□□□ -0.62
ZKSCAN1-201ENST00000324306 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms