RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PER1O15534 1290 aaPredicted RBP18.95■□□□□ 0.62
VARS2-201ENST00000321897 IGHDP01880 384 aa18.95■□□□□ 0.62
VARS2-201ENST00000321897 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
VARS2-201ENST00000321897 DDX19BQ9UMR2 479 aa18.95■□□□□ 0.62
VARS2-201ENST00000321897 PZPP20742 1482 aa18.95■□□□□ 0.62
VARS2-201ENST00000321897 RILPL2Q969X0 211 aa18.95■□□□□ 0.62
VARS2-201ENST00000321897 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
VARS2-201ENST00000321897 HDGFP51858 240 aaKnown RBP18.94■□□□□ 0.62
VARS2-201ENST00000321897 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
VARS2-201ENST00000321897 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
VARS2-201ENST00000321897 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 C22orf23Q9BZE7 217 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 ZMYND15Q9H091 742 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 CHMP5Q9NZZ3 219 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 IDI1Q13907 227 aa18.93■□□□□ 0.62
VARS2-201ENST00000321897 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
VARS2-201ENST00000321897 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
VARS2-201ENST00000321897 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
VARS2-201ENST00000321897 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
VARS2-201ENST00000321897 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
VARS2-201ENST00000321897 R3HCC1Q9Y3T6 440 aaKnown RBP18.91■□□□□ 0.62
VARS2-201ENST00000321897 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
VARS2-201ENST00000321897 DISP1Q96F81 1524 aa18.89■□□□□ 0.62
VARS2-201ENST00000321897 WDR62O43379 1518 aa18.89■□□□□ 0.61
VARS2-201ENST00000321897 PLEKHH1Q9ULM0 1364 aa18.89■□□□□ 0.61
VARS2-201ENST00000321897 RAPGEF6Q8TEU7 1601 aa18.89■□□□□ 0.61
VARS2-201ENST00000321897 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
VARS2-201ENST00000321897 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
VARS2-201ENST00000321897 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
VARS2-201ENST00000321897 MPNDQ8N594 471 aa18.88■□□□□ 0.61
VARS2-201ENST00000321897 KIF14Q15058 1648 aa18.88■□□□□ 0.61
VARS2-201ENST00000321897 TCOF1Q13428 1488 aaKnown RBP18.88■□□□□ 0.61
VARS2-201ENST00000321897 MRE11P49959 708 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 FGD1P98174 961 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 PANK2Q9BZ23 570 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 TMEM57Q8N5G2 664 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 PDE3AQ14432 1141 aa18.87■□□□□ 0.61
VARS2-201ENST00000321897 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
VARS2-201ENST00000321897 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
VARS2-201ENST00000321897 EMILIN1Q9Y6C2 1016 aa18.86■□□□□ 0.61
VARS2-201ENST00000321897 SYCP2Q9BX26 1530 aa18.86■□□□□ 0.61
VARS2-201ENST00000321897 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
VARS2-201ENST00000321897 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
VARS2-201ENST00000321897 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
VARS2-201ENST00000321897 PRAG1Q86YV5 1406 aa18.85■□□□□ 0.61
VARS2-201ENST00000321897 ESPNB1AK53 854 aa18.85■□□□□ 0.61
VARS2-201ENST00000321897 NOS1P29475 1434 aa18.84■□□□□ 0.61
VARS2-201ENST00000321897 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
VARS2-201ENST00000321897 ATF7IPQ6VMQ6 1270 aa18.83■□□□□ 0.6
VARS2-201ENST00000321897 NME9Q86XW9 330 aa18.83■□□□□ 0.6
VARS2-201ENST00000321897 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
VARS2-201ENST00000321897 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
VARS2-201ENST00000321897 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.6
VARS2-201ENST00000321897 RLBP1P12271 317 aa18.82■□□□□ 0.6
VARS2-201ENST00000321897 MCM4P33991 863 aa18.82■□□□□ 0.6
VARS2-201ENST00000321897 MVPQ14764 893 aaKnown RBP18.82■□□□□ 0.6
VARS2-201ENST00000321897 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
VARS2-201ENST00000321897 RNF214Q8ND24 703 aa18.82■□□□□ 0.6
VARS2-201ENST00000321897 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
VARS2-201ENST00000321897 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 NLRP6P59044 892 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 KIAA0556O60303 1618 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
VARS2-201ENST00000321897 KIAA1211Q6ZU35 1233 aa18.8■□□□□ 0.6
VARS2-201ENST00000321897 RALGAPBQ86X10 1494 aa18.8■□□□□ 0.6
VARS2-201ENST00000321897 GRPEL1Q9HAV7 217 aa18.8■□□□□ 0.6
VARS2-201ENST00000321897 NASPP49321 788 aaPredicted RBP18.8■□□□□ 0.6
VARS2-201ENST00000321897 KIF16BQ96L93 1317 aa18.8■□□□□ 0.6
VARS2-201ENST00000321897 SEC24BO95487 1268 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 MCM10Q7L590 875 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 GNAI1P63096 354 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
VARS2-201ENST00000321897 RRAGDQ9NQL2 400 aaPredicted RBP18.79■□□□□ 0.6
VARS2-201ENST00000321897 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
VARS2-201ENST00000321897 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
VARS2-201ENST00000321897 HMMRO75330 724 aa18.78■□□□□ 0.6
VARS2-201ENST00000321897 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
VARS2-201ENST00000321897 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
VARS2-201ENST00000321897 ADGRL1O94910 1474 aa18.78■□□□□ 0.6
VARS2-201ENST00000321897 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.77■□□□□ 0.6
VARS2-201ENST00000321897 ANO2Q9NQ90 1003 aa18.77■□□□□ 0.6
VARS2-201ENST00000321897 TRIM27P14373 513 aa18.77■□□□□ 0.6
VARS2-201ENST00000321897 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
VARS2-201ENST00000321897 SPATA31E1Q6ZUB1 1445 aa18.76■□□□□ 0.59
VARS2-201ENST00000321897 RRP9O43818 475 aaKnown RBP18.76■□□□□ 0.59
VARS2-201ENST00000321897 CEBPAP49715 358 aaPredicted RBP18.76■□□□□ 0.59
VARS2-201ENST00000321897 MCCP23508 829 aa18.76■□□□□ 0.59
VARS2-201ENST00000321897 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
VARS2-201ENST00000321897 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
VARS2-201ENST00000321897 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
VARS2-201ENST00000321897 DRC7Q8IY82 874 aa18.75■□□□□ 0.59
VARS2-201ENST00000321897 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms