RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
SIX5-201ENST00000317578 PARD3Q8TEW0 1356 aa24.53■■□□□ 1.52
SIX5-201ENST00000317578 NCKAP5LQ9HCH0 1330 aa24.53■■□□□ 1.52
SIX5-201ENST00000317578 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
SIX5-201ENST00000317578 CFAP53Q96M91 514 aa24.52■■□□□ 1.52
SIX5-201ENST00000317578 BCAR3O75815 825 aa24.51■■□□□ 1.51
SIX5-201ENST00000317578 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
SIX5-201ENST00000317578 SPINK5Q9NQ38 1064 aaPredicted RBP24.51■■□□□ 1.51
SIX5-201ENST00000317578 TRIM44Q96DX7 344 aaPredicted RBP24.51■■□□□ 1.51
SIX5-201ENST00000317578 RBM33Q96EV2 1170 aaKnown RBP24.51■■□□□ 1.51
SIX5-201ENST00000317578 GPRASP1Q5JY77 1395 aa24.51■■□□□ 1.51
SIX5-201ENST00000317578 ZBTB7CA1YPR0 619 aa24.49■■□□□ 1.51
SIX5-201ENST00000317578 DMRT2Q9Y5R5 561 aa24.49■■□□□ 1.51
SIX5-201ENST00000317578 C14orf37Q86TY3 774 aa24.49■■□□□ 1.51
SIX5-201ENST00000317578 PRDM15P57071 1507 aaPredicted RBP24.49■■□□□ 1.51
SIX5-201ENST00000317578 COL17A1Q9UMD9 1497 aaPredicted RBP24.49■■□□□ 1.51
SIX5-201ENST00000317578 NSD3Q9BZ95 1437 aa24.48■■□□□ 1.51
SIX5-201ENST00000317578 CDK19Q9BWU1 502 aa24.48■■□□□ 1.51
SIX5-201ENST00000317578 POGZQ7Z3K3 1410 aa24.47■■□□□ 1.51
SIX5-201ENST00000317578 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
SIX5-201ENST00000317578 BECN1Q14457 450 aa24.46■■□□□ 1.51
SIX5-201ENST00000317578 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
SIX5-201ENST00000317578 CGNL1Q0VF96 1302 aa24.46■■□□□ 1.51
SIX5-201ENST00000317578 MYH16Q9H6N6 1097 aa24.46■■□□□ 1.51
SIX5-201ENST00000317578 TCP11L2Q8N4U5 519 aa24.45■■□□□ 1.5
SIX5-201ENST00000317578 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
SIX5-201ENST00000317578 HMOX1P09601 288 aa24.44■■□□□ 1.5
SIX5-201ENST00000317578 C8orf34Q49A92 452 aa24.44■■□□□ 1.5
SIX5-201ENST00000317578 AAMPQ13685 434 aa24.43■■□□□ 1.5
SIX5-201ENST00000317578 ESPNB1AK53 854 aa24.42■■□□□ 1.5
SIX5-201ENST00000317578 HDGFL2Q7Z4V5 671 aaPredicted RBP24.42■■□□□ 1.5
SIX5-201ENST00000317578 PDE3BQ13370 1112 aa24.41■■□□□ 1.5
SIX5-201ENST00000317578 IQGAP3Q86VI3 1631 aa24.41■■□□□ 1.5
SIX5-201ENST00000317578 PDCL3Q9H2J4 239 aa24.41■■□□□ 1.5
SIX5-201ENST00000317578 PLXNC1O60486 1568 aa24.41■■□□□ 1.5
SIX5-201ENST00000317578 E9PCH4 1651 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 TSPOAP1O95153 1857 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 COG6Q9Y2V7 657 aa24.4■■□□□ 1.5
SIX5-201ENST00000317578 UNC13BO14795 1591 aa24.39■■□□□ 1.5
SIX5-201ENST00000317578 PTPRTO14522 1441 aa24.39■■□□□ 1.5
SIX5-201ENST00000317578 PANK1Q8TE04 598 aa24.38■■□□□ 1.49
SIX5-201ENST00000317578 TSR2Q969E8 191 aaKnown RBP24.38■■□□□ 1.49
SIX5-201ENST00000317578 MAPK8IP3Q9UPT6 1336 aa24.38■■□□□ 1.49
SIX5-201ENST00000317578 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
SIX5-201ENST00000317578 NUTM2GQ5VZR2 741 aa24.37■■□□□ 1.49
SIX5-201ENST00000317578 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.37■■□□□ 1.49
SIX5-201ENST00000317578 FAM13BQ9NYF5 915 aa24.37■■□□□ 1.49
SIX5-201ENST00000317578 CENPQQ7L2Z9 268 aaPredicted RBP24.36■■□□□ 1.49
SIX5-201ENST00000317578 TRPM1Q7Z4N2 1603 aa24.36■■□□□ 1.49
SIX5-201ENST00000317578 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
SIX5-201ENST00000317578 PDE4CQ08493 712 aa24.34■■□□□ 1.49
SIX5-201ENST00000317578 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
SIX5-201ENST00000317578 FGD1P98174 961 aa24.33■■□□□ 1.49
SIX5-201ENST00000317578 KIAA1211Q6ZU35 1233 aa24.33■■□□□ 1.49
SIX5-201ENST00000317578 RRS1Q15050 365 aaKnown RBP24.33■■□□□ 1.48
SIX5-201ENST00000317578 RPGRIP1LQ68CZ1 1315 aa24.32■■□□□ 1.48
SIX5-201ENST00000317578 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
SIX5-201ENST00000317578 THUMPD2Q9BTF0 503 aaKnown RBP24.31■■□□□ 1.48
SIX5-201ENST00000317578 TRPM2O94759 1503 aa24.31■■□□□ 1.48
SIX5-201ENST00000317578 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
SIX5-201ENST00000317578 TPM2P07951 284 aa24.3■■□□□ 1.48
SIX5-201ENST00000317578 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
SIX5-201ENST00000317578 TNNQ9UQP3 1299 aa24.3■■□□□ 1.48
SIX5-201ENST00000317578 NME9Q86XW9 330 aa24.28■■□□□ 1.48
SIX5-201ENST00000317578 ZHX1Q9UKY1 873 aaPredicted RBP24.28■■□□□ 1.48
SIX5-201ENST00000317578 CALD1Q05682 793 aaKnown RBP24.28■■□□□ 1.48
SIX5-201ENST00000317578 SLFN5Q08AF3 891 aa24.27■■□□□ 1.48
SIX5-201ENST00000317578 MRE11P49959 708 aa24.27■■□□□ 1.48
SIX5-201ENST00000317578 RUNDC1Q96C34 613 aa24.27■■□□□ 1.48
SIX5-201ENST00000317578 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
SIX5-201ENST00000317578 FYB1O15117 783 aa24.26■■□□□ 1.47
SIX5-201ENST00000317578 PRDM10Q9NQV6 1147 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 KIDINS220Q9ULH0 1771 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 TRAK2O60296 914 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 RIPK4P57078 832 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
SIX5-201ENST00000317578 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
SIX5-201ENST00000317578 SEC24BO95487 1268 aa24.24■■□□□ 1.47
SIX5-201ENST00000317578 UPF2Q9HAU5 1272 aaKnown RBP24.24■■□□□ 1.47
SIX5-201ENST00000317578 E9PSI1 815 aa24.23■■□□□ 1.47
SIX5-201ENST00000317578 GRPEL1Q9HAV7 217 aa24.23■■□□□ 1.47
SIX5-201ENST00000317578 FTSJ3Q8IY81 847 aaKnown RBP24.23■■□□□ 1.47
SIX5-201ENST00000317578 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
SIX5-201ENST00000317578 PRDM4Q9UKN5 801 aa24.22■■□□□ 1.47
SIX5-201ENST00000317578 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
SIX5-201ENST00000317578 MCM4P33991 863 aa24.22■■□□□ 1.47
SIX5-201ENST00000317578 ASXL1Q8IXJ9 1541 aa24.21■■□□□ 1.47
SIX5-201ENST00000317578 CEP152O94986 1710 aa24.21■■□□□ 1.47
SIX5-201ENST00000317578 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
SIX5-201ENST00000317578 NGDNQ8NEJ9 315 aaKnown RBP24.19■■□□□ 1.46
SIX5-201ENST00000317578 SMC4Q9NTJ3 1288 aa24.19■■□□□ 1.46
SIX5-201ENST00000317578 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
SIX5-201ENST00000317578 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
SIX5-201ENST00000317578 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
SIX5-201ENST00000317578 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms