RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 SPATA31A6Q5VVP1 1343 aa39.08■■■■□ 3.85
PGAM5-201ENST00000317555 KDM2AQ9Y2K7 1162 aa39.07■■■■□ 3.85
PGAM5-201ENST00000317555 PLEKHH1Q9ULM0 1364 aa39.07■■■■□ 3.84
PGAM5-201ENST00000317555 STAC3Q96MF2 364 aa39.06■■■■□ 3.84
PGAM5-201ENST00000317555 RGS17Q9UGC6 210 aaPredicted RBP39.05■■■■□ 3.84
PGAM5-201ENST00000317555 SIRT1Q96EB6 747 aa39.04■■■■□ 3.84
PGAM5-201ENST00000317555 ORAI2Q96SN7 254 aa39.04■■■■□ 3.84
PGAM5-201ENST00000317555 DDX17Q92841 729 aaKnown RBP39.03■■■■□ 3.84
PGAM5-201ENST00000317555 LRRC59Q96AG4 307 aaKnown RBP39.01■■■■□ 3.84
PGAM5-201ENST00000317555 LRP6O75581 1613 aa38.99■■■■□ 3.83
PGAM5-201ENST00000317555 ADGRB1O14514 1584 aa38.98■■■■□ 3.83
PGAM5-201ENST00000317555 DLC1Q96QB1 1528 aa38.95■■■■□ 3.83
PGAM5-201ENST00000317555 FMN2Q9NZ56 1722 aa38.94■■■■□ 3.82
PGAM5-201ENST00000317555 ESCO1Q5FWF5 840 aa38.94■■■■□ 3.82
PGAM5-201ENST00000317555 MEX3CQ5U5Q3 659 aaKnown RBP38.93■■■■□ 3.82
PGAM5-201ENST00000317555 PRAM1Q96QH2 718 aa38.92■■■■□ 3.82
PGAM5-201ENST00000317555 SOS2Q07890 1332 aaPredicted RBP38.9■■■■□ 3.82
PGAM5-201ENST00000317555 NUTM2FA1L443 756 aa38.9■■■■□ 3.82
PGAM5-201ENST00000317555 PNPLA6Q8IY17 1366 aa38.89■■■■□ 3.82
PGAM5-201ENST00000317555 NUTM2BA6NNL0 878 aaPredicted RBP38.88■■■■□ 3.81
PGAM5-201ENST00000317555 NUTM2EB1AL46 878 aaPredicted RBP38.88■■■■□ 3.81
PGAM5-201ENST00000317555 NUTM2AQ8IVF1 878 aaPredicted RBP38.88■■■■□ 3.81
PGAM5-201ENST00000317555 POGKQ9P215 609 aa38.88■■■■□ 3.81
PGAM5-201ENST00000317555 SAFB2Q14151 953 aaKnown RBP eCLIP38.86■■■■□ 3.81
PGAM5-201ENST00000317555 POTEAQ6S8J7 498 aa38.86■■■■□ 3.81
PGAM5-201ENST00000317555 TRAK1Q9UPV9 953 aa38.86■■■■□ 3.81
PGAM5-201ENST00000317555 NPHP3Q7Z494 1330 aa38.86■■■■□ 3.81
PGAM5-201ENST00000317555 KIF1AQ12756 1690 aa38.81■■■■□ 3.8
PGAM5-201ENST00000317555 FOXO3O43524 673 aa38.79■■■■□ 3.8
PGAM5-201ENST00000317555 RGPD8O14715 1765 aaPredicted RBP38.79■■■■□ 3.8
PGAM5-201ENST00000317555 PXDNQ92626 1479 aa38.79■■■■□ 3.8
PGAM5-201ENST00000317555 ADGRB2O60241 1585 aa38.78■■■■□ 3.8
PGAM5-201ENST00000317555 KIAA1210Q9ULL0 1709 aa38.77■■■■□ 3.8
PGAM5-201ENST00000317555 ZNF772Q68DY9 489 aaPredicted RBP38.74■■■■□ 3.79
PGAM5-201ENST00000317555 ARHGEF28Q8N1W1 1705 aaKnown RBP38.73■■■■□ 3.79
PGAM5-201ENST00000317555 XPCQ01831 940 aaPredicted RBP38.72■■■■□ 3.79
PGAM5-201ENST00000317555 COL22A1Q8NFW1 1626 aaPredicted RBP38.71■■■■□ 3.79
PGAM5-201ENST00000317555 MINK1Q8N4C8 1332 aaPredicted RBP38.69■■■■□ 3.78
PGAM5-201ENST00000317555 HIRIP3Q9BW71 556 aaPredicted RBP38.68■■■■□ 3.78
PGAM5-201ENST00000317555 PHF8Q9UPP1 1060 aa38.68■■■■□ 3.78
PGAM5-201ENST00000317555 ANKARQ7Z5J8 1434 aa38.68■■■■□ 3.78
PGAM5-201ENST00000317555 SIN3AQ96ST3 1273 aa38.66■■■■□ 3.78
PGAM5-201ENST00000317555 USP32Q8NFA0 1604 aa38.66■■■■□ 3.78
PGAM5-201ENST00000317555 AFF2P51816 1311 aa38.65■■■■□ 3.78
PGAM5-201ENST00000317555 C8orf37Q96NL8 207 aa38.64■■■■□ 3.78
PGAM5-201ENST00000317555 EIF3AQ14152 1382 aaKnown RBP38.64■■■■□ 3.78
PGAM5-201ENST00000317555 ADAMTS2O95450 1211 aa38.63■■■■□ 3.77
PGAM5-201ENST00000317555 TRIM26Q12899 539 aaPredicted RBP38.63■■■■□ 3.77
PGAM5-201ENST00000317555 L3MBTL2Q969R5 705 aa38.62■■■■□ 3.77
PGAM5-201ENST00000317555 KRT28Q7Z3Y7 464 aa38.61■■■■□ 3.77
PGAM5-201ENST00000317555 NEUROD1Q13562 356 aa38.6■■■■□ 3.77
PGAM5-201ENST00000317555 TULP4Q9NRJ4 1543 aa38.59■■■■□ 3.77
PGAM5-201ENST00000317555 WASLO00401 505 aaPredicted RBP38.59■■■■□ 3.77
PGAM5-201ENST00000317555 NBPF1Q3BBV0 1214 aa38.59■■■■□ 3.77
PGAM5-201ENST00000317555 SPATA31A3Q5VYP0 1347 aa38.57■■■■□ 3.76
PGAM5-201ENST00000317555 PSME1Q06323 249 aa38.56■■■■□ 3.76
PGAM5-201ENST00000317555 NGLY1Q96IV0 654 aa38.56■■■■□ 3.76
PGAM5-201ENST00000317555 PMFBP1Q8TBY8 1022 aa38.54■■■■□ 3.76
PGAM5-201ENST00000317555 PRR36Q9H6K5 1346 aa38.52■■■■□ 3.76
PGAM5-201ENST00000317555 TNS3Q68CZ2 1445 aa38.51■■■■□ 3.76
PGAM5-201ENST00000317555 MARF1Q9Y4F3 1742 aaKnown RBP38.51■■■■□ 3.76
PGAM5-201ENST00000317555 RXRBP28702 533 aa38.5■■■■□ 3.75
PGAM5-201ENST00000317555 SBNO1A3KN83 1393 aa38.48■■■■□ 3.75
PGAM5-201ENST00000317555 ITSN1Q15811 1721 aa38.48■■■■□ 3.75
PGAM5-201ENST00000317555 TRPM1Q7Z4N2 1603 aa38.45■■■■□ 3.75
PGAM5-201ENST00000317555 QTRT2Q9H974 415 aaKnown RBP38.44■■■■□ 3.74
PGAM5-201ENST00000317555 ATP7BP35670 1465 aa38.43■■■■□ 3.74
PGAM5-201ENST00000317555 GPRASP1Q5JY77 1395 aa38.43■■■■□ 3.74
PGAM5-201ENST00000317555 FNBP4Q8N3X1 1017 aaPredicted RBP38.42■■■■□ 3.74
PGAM5-201ENST00000317555 CDK19Q9BWU1 502 aa38.42■■■■□ 3.74
PGAM5-201ENST00000317555 NUDT16Q96DE0 195 aaKnown RBP38.41■■■■□ 3.74
PGAM5-201ENST00000317555 USP21Q9UK80 565 aa38.41■■■■□ 3.74
PGAM5-201ENST00000317555 ARHGEF10O15013 1369 aa38.41■■■■□ 3.74
PGAM5-201ENST00000317555 TRPM3Q9HCF6 1732 aaPredicted RBP38.41■■■■□ 3.74
PGAM5-201ENST00000317555 CENPJQ9HC77 1338 aaPredicted RBP38.4■■■■□ 3.74
PGAM5-201ENST00000317555 LMOD2Q6P5Q4 547 aa38.4■■■■□ 3.74
PGAM5-201ENST00000317555 CDK12Q9NYV4 1490 aaPredicted RBP38.4■■■■□ 3.74
PGAM5-201ENST00000317555 RBM6P78332 1123 aaKnown RBP38.38■■■■□ 3.73
PGAM5-201ENST00000317555 NGDNQ8NEJ9 315 aaKnown RBP38.38■■■■□ 3.73
PGAM5-201ENST00000317555 QRICH2Q9H0J4 1663 aa38.37■■■■□ 3.73
PGAM5-201ENST00000317555 HAP1P54257 671 aaPredicted RBP38.36■■■■□ 3.73
PGAM5-201ENST00000317555 ROCK2O75116 1388 aaKnown RBP38.34■■■■□ 3.73
PGAM5-201ENST00000317555 TOPAZ1Q8N9V7 1692 aa38.34■■■■□ 3.73
PGAM5-201ENST00000317555 ABCA3Q99758 1704 aa38.34■■■■□ 3.73
PGAM5-201ENST00000317555 TRPC5Q9UL62 973 aaPredicted RBP38.33■■■■□ 3.73
PGAM5-201ENST00000317555 ALS2Q96Q42 1657 aa38.33■■■■□ 3.73
PGAM5-201ENST00000317555 CABLES1Q8TDN4 633 aa38.32■■■■□ 3.72
PGAM5-201ENST00000317555 PLEKHG5O94827 1062 aa38.31■■■■□ 3.72
PGAM5-201ENST00000317555 CCDC61Q9Y6R9 512 aa38.29■■■■□ 3.72
PGAM5-201ENST00000317555 TONSLQ96HA7 1378 aa38.29■■■■□ 3.72
PGAM5-201ENST00000317555 BCL9LQ86UU0 1499 aa38.28■■■■□ 3.72
PGAM5-201ENST00000317555 ATRNO75882 1429 aa38.28■■■■□ 3.72
PGAM5-201ENST00000317555 SRPK2P78362 688 aaKnown RBP38.26■■■■□ 3.72
PGAM5-201ENST00000317555 NBPF8Q3BBV2 869 aa38.26■■■■□ 3.72
PGAM5-201ENST00000317555 RGS12O14924 1447 aa38.26■■■■□ 3.72
PGAM5-201ENST00000317555 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.26■■■■□ 3.71
PGAM5-201ENST00000317555 PAK3O75914 559 aaPredicted RBP38.25■■■■□ 3.71
PGAM5-201ENST00000317555 SLIT2O94813 1529 aa38.23■■■■□ 3.71
PGAM5-201ENST00000317555 POLR3AO14802 1390 aaPredicted RBP38.23■■■■□ 3.71
PGAM5-201ENST00000317555 ACEP12821 1306 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms