RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
TRIM25-201ENST00000316881 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
TRIM25-201ENST00000316881 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
TRIM25-201ENST00000316881 GOLGA6L1Q8N7Z2 621 aa17.43■□□□□ 0.38
TRIM25-201ENST00000316881 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
TRIM25-201ENST00000316881 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
TRIM25-201ENST00000316881 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
TRIM25-201ENST00000316881 NEUROD6Q96NK8 337 aa17.43■□□□□ 0.38
TRIM25-201ENST00000316881 GOLGA6L19H0YKK7 550 aa17.42■□□□□ 0.38
TRIM25-201ENST00000316881 BECN2A8MW95 431 aa17.42■□□□□ 0.38
TRIM25-201ENST00000316881 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
TRIM25-201ENST00000316881 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
TRIM25-201ENST00000316881 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
TRIM25-201ENST00000316881 KRI1Q8N9T8 703 aaKnown RBP17.41■□□□□ 0.38
TRIM25-201ENST00000316881 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
TRIM25-201ENST00000316881 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
TRIM25-201ENST00000316881 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
TRIM25-201ENST00000316881 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
TRIM25-201ENST00000316881 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
TRIM25-201ENST00000316881 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
TRIM25-201ENST00000316881 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
TRIM25-201ENST00000316881 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
TRIM25-201ENST00000316881 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
TRIM25-201ENST00000316881 SAFBQ15424 915 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRIM25-201ENST00000316881 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
TRIM25-201ENST00000316881 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
TRIM25-201ENST00000316881 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
TRIM25-201ENST00000316881 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
TRIM25-201ENST00000316881 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
TRIM25-201ENST00000316881 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
TRIM25-201ENST00000316881 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
TRIM25-201ENST00000316881 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
TRIM25-201ENST00000316881 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
TRIM25-201ENST00000316881 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
TRIM25-201ENST00000316881 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
TRIM25-201ENST00000316881 FYB1O15117 783 aa17.35■□□□□ 0.37
TRIM25-201ENST00000316881 GSE1Q14687 1217 aa17.35■□□□□ 0.37
TRIM25-201ENST00000316881 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
TRIM25-201ENST00000316881 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
TRIM25-201ENST00000316881 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
TRIM25-201ENST00000316881 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
TRIM25-201ENST00000316881 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
TRIM25-201ENST00000316881 PPP1R1BQ9UD71 204 aaPredicted RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
TRIM25-201ENST00000316881 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
TRIM25-201ENST00000316881 PRAM1Q96QH2 718 aa17.33■□□□□ 0.37
TRIM25-201ENST00000316881 GNAI3P08754 354 aa17.33■□□□□ 0.36
TRIM25-201ENST00000316881 FOXD4L6Q3SYB3 417 aaPredicted RBP17.33■□□□□ 0.36
TRIM25-201ENST00000316881 FOXD4L3Q6VB84 417 aaPredicted RBP17.33■□□□□ 0.36
TRIM25-201ENST00000316881 BRMS1Q9HCU9 246 aa17.33■□□□□ 0.36
TRIM25-201ENST00000316881 IKQ13123 557 aaPredicted RBP17.33■□□□□ 0.36
TRIM25-201ENST00000316881 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.36
TRIM25-201ENST00000316881 AAMPQ13685 434 aa17.32■□□□□ 0.36
TRIM25-201ENST00000316881 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
TRIM25-201ENST00000316881 CFTRP13569 1480 aa17.32■□□□□ 0.36
TRIM25-201ENST00000316881 XBP1P17861 261 aa17.32■□□□□ 0.36
TRIM25-201ENST00000316881 MTHFSP49914 203 aa17.31■□□□□ 0.36
TRIM25-201ENST00000316881 CCDC70Q6NSX1 233 aa17.31■□□□□ 0.36
TRIM25-201ENST00000316881 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
TRIM25-201ENST00000316881 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
TRIM25-201ENST00000316881 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
TRIM25-201ENST00000316881 SART3Q15020 963 aaKnown RBP17.3■□□□□ 0.36
TRIM25-201ENST00000316881 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
TRIM25-201ENST00000316881 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
TRIM25-201ENST00000316881 CABP4P57796 275 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
TRIM25-201ENST00000316881 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
TRIM25-201ENST00000316881 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
TRIM25-201ENST00000316881 PRDM11Q9NQV5 511 aa17.28■□□□□ 0.36
TRIM25-201ENST00000316881 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
TRIM25-201ENST00000316881 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
TRIM25-201ENST00000316881 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.36
TRIM25-201ENST00000316881 HFM1A2PYH4 1435 aa17.27■□□□□ 0.36
TRIM25-201ENST00000316881 PIP4K2BP78356 416 aa17.27■□□□□ 0.35
TRIM25-201ENST00000316881 FSD1Q9BTV5 496 aa17.27■□□□□ 0.35
TRIM25-201ENST00000316881 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.35
TRIM25-201ENST00000316881 CNTROBQ8N137 903 aa17.27■□□□□ 0.35
TRIM25-201ENST00000316881 WDR97A6NE52 1622 aa17.27■□□□□ 0.35
TRIM25-201ENST00000316881 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
TRIM25-201ENST00000316881 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
TRIM25-201ENST00000316881 PSMA5P28066 241 aa17.26■□□□□ 0.35
TRIM25-201ENST00000316881 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
TRIM25-201ENST00000316881 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
TRIM25-201ENST00000316881 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
TRIM25-201ENST00000316881 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
TRIM25-201ENST00000316881 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
TRIM25-201ENST00000316881 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms