RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 A2MP01023 1474 aa17.89■□□□□ 0.46
CSNK1D-202ENST00000314028 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
CSNK1D-202ENST00000314028 FBLN1P23142 703 aa17.89■□□□□ 0.45
CSNK1D-202ENST00000314028 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
CSNK1D-202ENST00000314028 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
CSNK1D-202ENST00000314028 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
CSNK1D-202ENST00000314028 COL17A1Q9UMD9 1497 aaPredicted RBP17.87■□□□□ 0.45
CSNK1D-202ENST00000314028 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
CSNK1D-202ENST00000314028 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
CSNK1D-202ENST00000314028 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
CSNK1D-202ENST00000314028 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
CSNK1D-202ENST00000314028 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
CSNK1D-202ENST00000314028 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
CSNK1D-202ENST00000314028 XRCC6P12956 609 aaKnown RBP eCLIP17.85■□□□□ 0.453e-10■□□□□ 9.9
CSNK1D-202ENST00000314028 MBD5Q9P267 1494 aa17.85■□□□□ 0.45
CSNK1D-202ENST00000314028 TRIM27P14373 513 aa17.85■□□□□ 0.45
CSNK1D-202ENST00000314028 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
CSNK1D-202ENST00000314028 RRAGDQ9NQL2 400 aaPredicted RBP17.85■□□□□ 0.45
CSNK1D-202ENST00000314028 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-202ENST00000314028 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-202ENST00000314028 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
CSNK1D-202ENST00000314028 ARHGEF12Q9NZN5 1544 aa17.83■□□□□ 0.45
CSNK1D-202ENST00000314028 CASC1Q6TDU7 716 aa17.83■□□□□ 0.45
CSNK1D-202ENST00000314028 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.45
CSNK1D-202ENST00000314028 BLMP54132 1417 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-202ENST00000314028 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
CSNK1D-202ENST00000314028 MRE11P49959 708 aa17.82■□□□□ 0.44
CSNK1D-202ENST00000314028 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
CSNK1D-202ENST00000314028 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
CSNK1D-202ENST00000314028 GRPEL1Q9HAV7 217 aa17.82■□□□□ 0.44
CSNK1D-202ENST00000314028 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
CSNK1D-202ENST00000314028 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
CSNK1D-202ENST00000314028 MPNDQ8N594 471 aa17.81■□□□□ 0.44
CSNK1D-202ENST00000314028 WDR63Q8IWG1 891 aa17.81■□□□□ 0.44
CSNK1D-202ENST00000314028 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
CSNK1D-202ENST00000314028 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
CSNK1D-202ENST00000314028 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-202ENST00000314028 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-202ENST00000314028 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-202ENST00000314028 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
CSNK1D-202ENST00000314028 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
CSNK1D-202ENST00000314028 SCAF11Q99590 1463 aaKnown RBP17.78■□□□□ 0.44
CSNK1D-202ENST00000314028 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
CSNK1D-202ENST00000314028 RNF214Q8ND24 703 aa17.77■□□□□ 0.44
CSNK1D-202ENST00000314028 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
CSNK1D-202ENST00000314028 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.43
CSNK1D-202ENST00000314028 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
CSNK1D-202ENST00000314028 ESPNB1AK53 854 aa17.76■□□□□ 0.43
CSNK1D-202ENST00000314028 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
CSNK1D-202ENST00000314028 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
CSNK1D-202ENST00000314028 TRIM6-TRIM34B2RNG4 842 aa17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 TNPO1Q92973 898 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
CSNK1D-202ENST00000314028 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-202ENST00000314028 RBM10P98175 930 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-202ENST00000314028 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
CSNK1D-202ENST00000314028 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
CSNK1D-202ENST00000314028 SSFA2P28290 1259 aa17.73■□□□□ 0.43
CSNK1D-202ENST00000314028 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
CSNK1D-202ENST00000314028 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
CSNK1D-202ENST00000314028 USP19O94966 1318 aa17.72■□□□□ 0.43
CSNK1D-202ENST00000314028 STAC3Q96MF2 364 aa17.72■□□□□ 0.43
CSNK1D-202ENST00000314028 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.43
CSNK1D-202ENST00000314028 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
CSNK1D-202ENST00000314028 TRAPPC8Q9Y2L5 1435 aa17.7■□□□□ 0.42
CSNK1D-202ENST00000314028 PRPF40AO75400 957 aaKnown RBP17.7■□□□□ 0.42
CSNK1D-202ENST00000314028 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
CSNK1D-202ENST00000314028 AAMPQ13685 434 aa17.69■□□□□ 0.42
CSNK1D-202ENST00000314028 R3HCC1Q9Y3T6 440 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-202ENST00000314028 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
CSNK1D-202ENST00000314028 NOS1P29475 1434 aa17.68■□□□□ 0.42
CSNK1D-202ENST00000314028 ST18O60284 1047 aa17.68■□□□□ 0.42
CSNK1D-202ENST00000314028 SKOR2Q2VWA4 1001 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-202ENST00000314028 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
CSNK1D-202ENST00000314028 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-202ENST00000314028 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
CSNK1D-202ENST00000314028 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-202ENST00000314028 SMARCA5O60264 1052 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-202ENST00000314028 CDC45O75419 566 aa17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 WDR7Q9Y4E6 1490 aa17.66■□□□□ 0.42
CSNK1D-202ENST00000314028 ADGBQ8N7X0 1667 aa17.65■□□□□ 0.42
CSNK1D-202ENST00000314028 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
CSNK1D-202ENST00000314028 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-202ENST00000314028 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-202ENST00000314028 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
CSNK1D-202ENST00000314028 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
CSNK1D-202ENST00000314028 ANO2Q9NQ90 1003 aa17.64■□□□□ 0.41
CSNK1D-202ENST00000314028 RTF1Q92541 710 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-202ENST00000314028 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
CSNK1D-202ENST00000314028 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-202ENST00000314028 NEK4P51957 841 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms