RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 DLC1Q96QB1 1528 aa21.41■■□□□ 1.02
PPP1CA-201ENST00000312989 LRP6O75581 1613 aa21.4■■□□□ 1.02
PPP1CA-201ENST00000312989 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
PPP1CA-201ENST00000312989 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
PPP1CA-201ENST00000312989 ORAI2Q96SN7 254 aa21.39■■□□□ 1.02
PPP1CA-201ENST00000312989 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
PPP1CA-201ENST00000312989 STAC3Q96MF2 364 aa21.36■■□□□ 1.01
PPP1CA-201ENST00000312989 KDM2AQ9Y2K7 1162 aa21.36■■□□□ 1.01
PPP1CA-201ENST00000312989 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
PPP1CA-201ENST00000312989 SPATA31A6Q5VVP1 1343 aa21.33■■□□□ 1
PPP1CA-201ENST00000312989 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
PPP1CA-201ENST00000312989 PRAM1Q96QH2 718 aa21.32■■□□□ 1
PPP1CA-201ENST00000312989 PNPLA6Q8IY17 1366 aa21.32■■□□□ 1
PPP1CA-201ENST00000312989 ADGRB2O60241 1585 aa21.3■■□□□ 1
PPP1CA-201ENST00000312989 PXDNQ92626 1479 aa21.3■■□□□ 1
PPP1CA-201ENST00000312989 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
PPP1CA-201ENST00000312989 SOCS7O14512 581 aa21.28■■□□□ 1
PPP1CA-201ENST00000312989 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
PPP1CA-201ENST00000312989 TRAK1Q9UPV9 953 aa21.27■■□□□ 1
PPP1CA-201ENST00000312989 POTEAQ6S8J7 498 aa21.26■□□□□ 0.99
PPP1CA-201ENST00000312989 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-201ENST00000312989 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
PPP1CA-201ENST00000312989 USP32Q8NFA0 1604 aa21.25■□□□□ 0.99
PPP1CA-201ENST00000312989 KIAA1210Q9ULL0 1709 aa21.25■□□□□ 0.99
PPP1CA-201ENST00000312989 SAFB2Q14151 953 aaKnown RBP eCLIP21.24■□□□□ 0.99
PPP1CA-201ENST00000312989 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
PPP1CA-201ENST00000312989 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
PPP1CA-201ENST00000312989 TRIM26Q12899 539 aaPredicted RBP21.23■□□□□ 0.99
PPP1CA-201ENST00000312989 ARHGEF28Q8N1W1 1705 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-201ENST00000312989 NBPF1Q3BBV0 1214 aa21.23■□□□□ 0.99
PPP1CA-201ENST00000312989 NPHP3Q7Z494 1330 aa21.21■□□□□ 0.99
PPP1CA-201ENST00000312989 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
PPP1CA-201ENST00000312989 FOXO3O43524 673 aa21.21■□□□□ 0.99
PPP1CA-201ENST00000312989 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
PPP1CA-201ENST00000312989 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
PPP1CA-201ENST00000312989 POGKQ9P215 609 aa21.2■□□□□ 0.98
PPP1CA-201ENST00000312989 KIF1AQ12756 1690 aa21.19■□□□□ 0.98
PPP1CA-201ENST00000312989 XPCQ01831 940 aaPredicted RBP21.18■□□□□ 0.98
PPP1CA-201ENST00000312989 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
PPP1CA-201ENST00000312989 MINK1Q8N4C8 1332 aaPredicted RBP21.17■□□□□ 0.98
PPP1CA-201ENST00000312989 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
PPP1CA-201ENST00000312989 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
PPP1CA-201ENST00000312989 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
PPP1CA-201ENST00000312989 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
PPP1CA-201ENST00000312989 ATP7BP35670 1465 aa21.14■□□□□ 0.98
PPP1CA-201ENST00000312989 WASLO00401 505 aaPredicted RBP21.14■□□□□ 0.98
PPP1CA-201ENST00000312989 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.98
PPP1CA-201ENST00000312989 RGPD8O14715 1765 aaPredicted RBP21.14■□□□□ 0.97
PPP1CA-201ENST00000312989 SPATA31A3Q5VYP0 1347 aa21.13■□□□□ 0.97
PPP1CA-201ENST00000312989 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
PPP1CA-201ENST00000312989 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
PPP1CA-201ENST00000312989 NBPF8Q3BBV2 869 aa21.1■□□□□ 0.97
PPP1CA-201ENST00000312989 MEX3CQ5U5Q3 659 aaKnown RBP21.1■□□□□ 0.97
PPP1CA-201ENST00000312989 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
PPP1CA-201ENST00000312989 AFF2P51816 1311 aa21.09■□□□□ 0.97
PPP1CA-201ENST00000312989 TNS3Q68CZ2 1445 aa21.09■□□□□ 0.97
PPP1CA-201ENST00000312989 SBNO1A3KN83 1393 aa21.08■□□□□ 0.97
PPP1CA-201ENST00000312989 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.97
PPP1CA-201ENST00000312989 ZNF772Q68DY9 489 aaPredicted RBP21.08■□□□□ 0.96
PPP1CA-201ENST00000312989 PMFBP1Q8TBY8 1022 aa21.08■□□□□ 0.96
PPP1CA-201ENST00000312989 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
PPP1CA-201ENST00000312989 TRPM3Q9HCF6 1732 aaPredicted RBP21.07■□□□□ 0.96
PPP1CA-201ENST00000312989 ADAMTS2O95450 1211 aa21.06■□□□□ 0.96
PPP1CA-201ENST00000312989 C8orf37Q96NL8 207 aa21.06■□□□□ 0.96
PPP1CA-201ENST00000312989 TOPAZ1Q8N9V7 1692 aa21.05■□□□□ 0.96
PPP1CA-201ENST00000312989 FNBP4Q8N3X1 1017 aaPredicted RBP21.04■□□□□ 0.96
PPP1CA-201ENST00000312989 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
PPP1CA-201ENST00000312989 CENPJQ9HC77 1338 aaPredicted RBP21.03■□□□□ 0.96
PPP1CA-201ENST00000312989 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
PPP1CA-201ENST00000312989 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
PPP1CA-201ENST00000312989 POLR3AO14802 1390 aaPredicted RBP21.01■□□□□ 0.95
PPP1CA-201ENST00000312989 ROCK2O75116 1388 aaKnown RBP21.01■□□□□ 0.95
PPP1CA-201ENST00000312989 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
PPP1CA-201ENST00000312989 PSME1Q06323 249 aa20.99■□□□□ 0.95
PPP1CA-201ENST00000312989 RALGAPBQ86X10 1494 aa20.99■□□□□ 0.95
PPP1CA-201ENST00000312989 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
PPP1CA-201ENST00000312989 QRICH2Q9H0J4 1663 aa20.99■□□□□ 0.95
PPP1CA-201ENST00000312989 ABCA3Q99758 1704 aa20.99■□□□□ 0.95
PPP1CA-201ENST00000312989 ARHGEF10O15013 1369 aa20.98■□□□□ 0.95
PPP1CA-201ENST00000312989 SLIT2O94813 1529 aa20.98■□□□□ 0.95
PPP1CA-201ENST00000312989 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 NGLY1Q96IV0 654 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 ATRNO75882 1429 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 PLEKHG3A1L390 1219 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 RGS12O14924 1447 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 ITSN1Q15811 1721 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 MARF1Q9Y4F3 1742 aaKnown RBP20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 CCDC61Q9Y6R9 512 aa20.97■□□□□ 0.95
PPP1CA-201ENST00000312989 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
PPP1CA-201ENST00000312989 CRYBG1Q9Y4K1 1723 aa20.95■□□□□ 0.94
PPP1CA-201ENST00000312989 RXRBP28702 533 aa20.95■□□□□ 0.94
PPP1CA-201ENST00000312989 QTRT2Q9H974 415 aaKnown RBP20.95■□□□□ 0.94
PPP1CA-201ENST00000312989 USP21Q9UK80 565 aa20.95■□□□□ 0.94
PPP1CA-201ENST00000312989 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
PPP1CA-201ENST00000312989 ACEP12821 1306 aa20.92■□□□□ 0.94
PPP1CA-201ENST00000312989 SBNO2Q9Y2G9 1366 aa20.92■□□□□ 0.94
PPP1CA-201ENST00000312989 NGDNQ8NEJ9 315 aaKnown RBP20.92■□□□□ 0.94
PPP1CA-201ENST00000312989 PPIP5K1Q6PFW1 1433 aa20.92■□□□□ 0.94
PPP1CA-201ENST00000312989 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
PPP1CA-201ENST00000312989 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms