RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 C9orf78Q9NZ63 289 aaPredicted RBP21.13■□□□□ 0.97
GABRB3-202ENST00000311550 BRPF3Q9ULD4 1205 aa21.13■□□□□ 0.97
GABRB3-202ENST00000311550 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.13■□□□□ 0.97
GABRB3-202ENST00000311550 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
GABRB3-202ENST00000311550 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
GABRB3-202ENST00000311550 FAM69CQ0P6D2 419 aa21.12■□□□□ 0.97
GABRB3-202ENST00000311550 MCTP1Q6DN14 999 aa21.11■□□□□ 0.97
GABRB3-202ENST00000311550 CUL7Q14999 1698 aa21.11■□□□□ 0.97
GABRB3-202ENST00000311550 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
GABRB3-202ENST00000311550 CDC45O75419 566 aa21.1■□□□□ 0.97
GABRB3-202ENST00000311550 PTPRKQ15262 1439 aa21.1■□□□□ 0.97
GABRB3-202ENST00000311550 SLFN5Q08AF3 891 aa21.1■□□□□ 0.97
GABRB3-202ENST00000311550 PLEKHH2Q8IVE3 1493 aa21.1■□□□□ 0.97
GABRB3-202ENST00000311550 IL27Q8NEV9 243 aa21.08■□□□□ 0.97
GABRB3-202ENST00000311550 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.97
GABRB3-202ENST00000311550 CABP1Q9NZU7 370 aa21.08■□□□□ 0.96
GABRB3-202ENST00000311550 H3BQV1 296 aa21.07■□□□□ 0.96
GABRB3-202ENST00000311550 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
GABRB3-202ENST00000311550 IFFO2Q5TF58 517 aa21.07■□□□□ 0.96
GABRB3-202ENST00000311550 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
GABRB3-202ENST00000311550 HSP90AA2PQ14568 343 aaPredicted RBP21.06■□□□□ 0.96
GABRB3-202ENST00000311550 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
GABRB3-202ENST00000311550 ATP6V1DQ9Y5K8 247 aa21.06■□□□□ 0.96
GABRB3-202ENST00000311550 IFIT2P09913 472 aaKnown RBP21.06■□□□□ 0.96
GABRB3-202ENST00000311550 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
GABRB3-202ENST00000311550 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
GABRB3-202ENST00000311550 TRAK2O60296 914 aa21.06■□□□□ 0.96
GABRB3-202ENST00000311550 NUCB2P80303 420 aa21.05■□□□□ 0.96
GABRB3-202ENST00000311550 MVPQ14764 893 aaKnown RBP21.05■□□□□ 0.96
GABRB3-202ENST00000311550 SF3A1Q15459 793 aaKnown RBP21.04■□□□□ 0.96
GABRB3-202ENST00000311550 FAM184AQ8NB25 1140 aa21.04■□□□□ 0.96
GABRB3-202ENST00000311550 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
GABRB3-202ENST00000311550 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
GABRB3-202ENST00000311550 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
GABRB3-202ENST00000311550 TOMM22Q9NS69 142 aa21.04■□□□□ 0.96
GABRB3-202ENST00000311550 ZKSCAN1P17029 563 aaPredicted RBP21.03■□□□□ 0.96
GABRB3-202ENST00000311550 ATF7IPQ6VMQ6 1270 aa21.03■□□□□ 0.96
GABRB3-202ENST00000311550 NEXNQ0ZGT2 675 aa21.03■□□□□ 0.96
GABRB3-202ENST00000311550 TXNDC2Q86VQ3 553 aa21.02■□□□□ 0.96
GABRB3-202ENST00000311550 TPM4P67936 248 aa21.02■□□□□ 0.96
GABRB3-202ENST00000311550 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.95
GABRB3-202ENST00000311550 PSME1Q06323 249 aa21.02■□□□□ 0.95
GABRB3-202ENST00000311550 NLRP6P59044 892 aa21.01■□□□□ 0.95
GABRB3-202ENST00000311550 KIF3AQ9Y496 699 aa21.01■□□□□ 0.95
GABRB3-202ENST00000311550 VPS37CA5D8V6 355 aaPredicted RBP21■□□□□ 0.95
GABRB3-202ENST00000311550 RAPGEF3O95398 923 aa21■□□□□ 0.95
GABRB3-202ENST00000311550 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
GABRB3-202ENST00000311550 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
GABRB3-202ENST00000311550 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
GABRB3-202ENST00000311550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.98■□□□□ 0.95
GABRB3-202ENST00000311550 MRE11P49959 708 aa20.98■□□□□ 0.95
GABRB3-202ENST00000311550 G3BP1Q13283 466 aaKnown RBP eCLIP20.98■□□□□ 0.95
GABRB3-202ENST00000311550 SULT6B1Q6IMI4 303 aa20.98■□□□□ 0.95
GABRB3-202ENST00000311550 GCC1Q96CN9 775 aa20.98■□□□□ 0.95
GABRB3-202ENST00000311550 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
GABRB3-202ENST00000311550 SMC3Q9UQE7 1217 aa20.97■□□□□ 0.95
GABRB3-202ENST00000311550 AIMP1Q12904 312 aaKnown RBP20.97■□□□□ 0.95
GABRB3-202ENST00000311550 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
GABRB3-202ENST00000311550 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
GABRB3-202ENST00000311550 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
GABRB3-202ENST00000311550 NEK4P51957 841 aa20.95■□□□□ 0.94
GABRB3-202ENST00000311550 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
GABRB3-202ENST00000311550 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 CREBRFQ8IUR6 639 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 RNF214Q8ND24 703 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 DDX58O95786 925 aaKnown RBP20.94■□□□□ 0.94
GABRB3-202ENST00000311550 CAVIN1Q6NZI2 390 aaKnown RBP20.94■□□□□ 0.94
GABRB3-202ENST00000311550 BECN2A8MW95 431 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 NASPP49321 788 aaPredicted RBP20.94■□□□□ 0.94
GABRB3-202ENST00000311550 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 SURF6O75683 361 aaKnown RBP20.94■□□□□ 0.94
GABRB3-202ENST00000311550 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
GABRB3-202ENST00000311550 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
GABRB3-202ENST00000311550 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
GABRB3-202ENST00000311550 AMER1Q5JTC6 1135 aaPredicted RBP20.93■□□□□ 0.94
GABRB3-202ENST00000311550 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
GABRB3-202ENST00000311550 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
GABRB3-202ENST00000311550 CT47B1P0C2W7 299 aaPredicted RBP20.93■□□□□ 0.94
GABRB3-202ENST00000311550 CHD1LQ86WJ1 897 aa20.93■□□□□ 0.94
GABRB3-202ENST00000311550 THUMPD2Q9BTF0 503 aaKnown RBP20.93■□□□□ 0.94
GABRB3-202ENST00000311550 DUSP27Q5VZP5 1158 aa20.92■□□□□ 0.94
GABRB3-202ENST00000311550 RARSP54136 660 aaKnown RBP20.92■□□□□ 0.94
GABRB3-202ENST00000311550 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 FOSBP53539 338 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 BICD2Q8TD16 824 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 GNAI3P08754 354 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 ERC2O15083 957 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 CCDC30Q5VVM6 783 aa20.91■□□□□ 0.94
GABRB3-202ENST00000311550 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
GABRB3-202ENST00000311550 PRPF40AO75400 957 aaKnown RBP20.9■□□□□ 0.94
GABRB3-202ENST00000311550 RABEP1Q15276 862 aa20.9■□□□□ 0.94
GABRB3-202ENST00000311550 KIF14Q15058 1648 aa20.9■□□□□ 0.94
GABRB3-202ENST00000311550 RASSF8Q8NHQ8 419 aa20.89■□□□□ 0.93
GABRB3-202ENST00000311550 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
GABRB3-202ENST00000311550 FAM13BQ9NYF5 915 aa20.89■□□□□ 0.93
GABRB3-202ENST00000311550 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.93
GABRB3-202ENST00000311550 RIC3Q7Z5B4 369 aa20.89■□□□□ 0.93
GABRB3-202ENST00000311550 ABTB2Q8N961 1025 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms