RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
SSH3-201ENST00000308127 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
SSH3-201ENST00000308127 POLR3AO14802 1390 aaPredicted RBP21.21■□□□□ 0.99
SSH3-201ENST00000308127 GZF1Q9H116 711 aaPredicted RBP21.2■□□□□ 0.98
SSH3-201ENST00000308127 STK26Q9P289 416 aa21.2■□□□□ 0.98
SSH3-201ENST00000308127 FANCAO15360 1455 aa21.2■□□□□ 0.98
SSH3-201ENST00000308127 BECN1Q14457 450 aa21.19■□□□□ 0.98
SSH3-201ENST00000308127 FTSJ3Q8IY81 847 aaKnown RBP21.19■□□□□ 0.98
SSH3-201ENST00000308127 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
SSH3-201ENST00000308127 TBC1D2Q9BYX2 928 aa21.19■□□□□ 0.98
SSH3-201ENST00000308127 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
SSH3-201ENST00000308127 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
SSH3-201ENST00000308127 MAP3K4Q9Y6R4 1608 aa21.17■□□□□ 0.98
SSH3-201ENST00000308127 STAC3Q96MF2 364 aa21.17■□□□□ 0.98
SSH3-201ENST00000308127 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
SSH3-201ENST00000308127 GGNBP2Q9H3C7 697 aa21.17■□□□□ 0.98
SSH3-201ENST00000308127 TET3O43151 1660 aa21.16■□□□□ 0.98
SSH3-201ENST00000308127 UPF2Q9HAU5 1272 aaKnown RBP21.16■□□□□ 0.98
SSH3-201ENST00000308127 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
SSH3-201ENST00000308127 RTEL1-TNFRSF6BF6WH68 1400 aa21.15■□□□□ 0.98
SSH3-201ENST00000308127 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
SSH3-201ENST00000308127 PRKCSHP14314 528 aaPredicted RBP21.15■□□□□ 0.98
SSH3-201ENST00000308127 SMC4Q9NTJ3 1288 aa21.15■□□□□ 0.98
SSH3-201ENST00000308127 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
SSH3-201ENST00000308127 MROH2AA6NES4 1674 aa21.14■□□□□ 0.98
SSH3-201ENST00000308127 ITPRIPQ8IWB1 547 aa21.14■□□□□ 0.97
SSH3-201ENST00000308127 CFAP53Q96M91 514 aa21.14■□□□□ 0.97
SSH3-201ENST00000308127 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
SSH3-201ENST00000308127 FBLN1P23142 703 aa21.13■□□□□ 0.97
SSH3-201ENST00000308127 RWDD1Q9H446 243 aaPredicted RBP21.12■□□□□ 0.97
SSH3-201ENST00000308127 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
SSH3-201ENST00000308127 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
SSH3-201ENST00000308127 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
SSH3-201ENST00000308127 WDR63Q8IWG1 891 aa21.11■□□□□ 0.97
SSH3-201ENST00000308127 SHPRHQ149N8 1683 aa21.11■□□□□ 0.97
SSH3-201ENST00000308127 ZKSCAN2Q63HK3 967 aa21.1■□□□□ 0.97
SSH3-201ENST00000308127 SSH1Q8WYL5 1049 aa21.1■□□□□ 0.97
SSH3-201ENST00000308127 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
SSH3-201ENST00000308127 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
SSH3-201ENST00000308127 TRIM27P14373 513 aa21.09■□□□□ 0.97
SSH3-201ENST00000308127 MYH16Q9H6N6 1097 aa21.09■□□□□ 0.97
SSH3-201ENST00000308127 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
SSH3-201ENST00000308127 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
SSH3-201ENST00000308127 MYOM2P54296 1465 aa21.08■□□□□ 0.97
SSH3-201ENST00000308127 NGEFQ8N5V2 710 aa21.08■□□□□ 0.96
SSH3-201ENST00000308127 MROH1Q8NDA8 1641 aa21.07■□□□□ 0.96
SSH3-201ENST00000308127 KIF1BO60333 1816 aa21.07■□□□□ 0.96
SSH3-201ENST00000308127 NINLQ9Y2I6 1382 aa21.07■□□□□ 0.96
SSH3-201ENST00000308127 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
SSH3-201ENST00000308127 IQSEC2Q5JU85 1478 aa21.06■□□□□ 0.96
SSH3-201ENST00000308127 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
SSH3-201ENST00000308127 PPRC1Q5VV67 1664 aaKnown RBP21.05■□□□□ 0.96
SSH3-201ENST00000308127 ZNF518AQ6AHZ1 1483 aa21.05■□□□□ 0.96
SSH3-201ENST00000308127 C22orf23Q9BZE7 217 aa21.05■□□□□ 0.96
SSH3-201ENST00000308127 MINK1Q8N4C8 1332 aaPredicted RBP21.05■□□□□ 0.96
SSH3-201ENST00000308127 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
SSH3-201ENST00000308127 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
SSH3-201ENST00000308127 PANK2Q9BZ23 570 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 INO80Q9ULG1 1556 aaPredicted RBP21.03■□□□□ 0.96
SSH3-201ENST00000308127 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
SSH3-201ENST00000308127 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 LNPKQ9C0E8 428 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 EFCAB6Q5THR3 1501 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 NPATQ14207 1427 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 TMPOP42166 694 aaKnown RBP21.03■□□□□ 0.96
SSH3-201ENST00000308127 FOXD4L1Q9NU39 408 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 TRIM35Q9UPQ4 493 aa21.03■□□□□ 0.96
SSH3-201ENST00000308127 C1orf115Q9H7X2 142 aa21.02■□□□□ 0.96
SSH3-201ENST00000308127 EVC2Q86UK5 1308 aa21.02■□□□□ 0.96
SSH3-201ENST00000308127 RIPK4P57078 832 aa21.01■□□□□ 0.95
SSH3-201ENST00000308127 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
SSH3-201ENST00000308127 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
SSH3-201ENST00000308127 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
SSH3-201ENST00000308127 RRAGDQ9NQL2 400 aaPredicted RBP21.01■□□□□ 0.95
SSH3-201ENST00000308127 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
SSH3-201ENST00000308127 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
SSH3-201ENST00000308127 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
SSH3-201ENST00000308127 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
SSH3-201ENST00000308127 CCDC27Q2M243 656 aa20.98■□□□□ 0.95
SSH3-201ENST00000308127 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
SSH3-201ENST00000308127 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
SSH3-201ENST00000308127 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
SSH3-201ENST00000308127 MCM4P33991 863 aa20.97■□□□□ 0.95
SSH3-201ENST00000308127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.97■□□□□ 0.95
SSH3-201ENST00000308127 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
SSH3-201ENST00000308127 ASXL2Q76L83 1435 aa20.95■□□□□ 0.95
SSH3-201ENST00000308127 XRCC6P12956 609 aaKnown RBP eCLIP20.95■□□□□ 0.94
SSH3-201ENST00000308127 ADGRB1O14514 1584 aa20.95■□□□□ 0.94
SSH3-201ENST00000308127 IFT172Q9UG01 1749 aa20.95■□□□□ 0.94
SSH3-201ENST00000308127 ADGRB3O60242 1522 aa20.95■□□□□ 0.94
SSH3-201ENST00000308127 ANKRD36BQ8N2N9 1353 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 HMOX1P09601 288 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 TULP4Q9NRJ4 1543 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 FYB1O15117 783 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 DDX19BQ9UMR2 479 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 KIDINS220Q9ULH0 1771 aa20.94■□□□□ 0.94
SSH3-201ENST00000308127 ABCA9Q8IUA7 1624 aa20.93■□□□□ 0.94
SSH3-201ENST00000308127 IDI1Q13907 227 aa20.93■□□□□ 0.94
SSH3-201ENST00000308127 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms