RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
ZNF556-201ENST00000307635 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
ZNF556-201ENST00000307635 NUDT16Q96DE0 195 aaKnown RBP13.12□□□□□ -0.31
ZNF556-201ENST00000307635 GNAI1P63096 354 aa13.12□□□□□ -0.31
ZNF556-201ENST00000307635 RIPK4P57078 832 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
ZNF556-201ENST00000307635 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 TCEAL9Q9UHQ7 104 aa13.11□□□□□ -0.31
ZNF556-201ENST00000307635 NBPF8Q3BBV2 869 aa13.1□□□□□ -0.31
ZNF556-201ENST00000307635 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
ZNF556-201ENST00000307635 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
ZNF556-201ENST00000307635 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
ZNF556-201ENST00000307635 RRP7AQ9Y3A4 280 aaKnown RBP13.1□□□□□ -0.31
ZNF556-201ENST00000307635 RGS3P49796 1198 aa13.1□□□□□ -0.31
ZNF556-201ENST00000307635 ATP10BO94823 1461 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 HMOX1P09601 288 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 HSPA2P54652 639 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
ZNF556-201ENST00000307635 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 MTHFSP49914 203 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
ZNF556-201ENST00000307635 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 EXOC5O00471 708 aa13.09□□□□□ -0.31
ZNF556-201ENST00000307635 MARCH6O60337 910 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 GOLGA6L4A6NEF3 574 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 ZPR1O75312 459 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 NUP160Q12769 1436 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 ATP10AO60312 1499 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
ZNF556-201ENST00000307635 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 RAD21O60216 631 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
ZNF556-201ENST00000307635 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
ZNF556-201ENST00000307635 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 STARD3NLO95772 234 aa13.07□□□□□ -0.32
ZNF556-201ENST00000307635 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
ZNF556-201ENST00000307635 API5Q9BZZ5 524 aaKnown RBP13.07□□□□□ -0.32
ZNF556-201ENST00000307635 E9PSI1 815 aa13.06□□□□□ -0.32
ZNF556-201ENST00000307635 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
ZNF556-201ENST00000307635 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
ZNF556-201ENST00000307635 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
ZNF556-201ENST00000307635 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
ZNF556-201ENST00000307635 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
ZNF556-201ENST00000307635 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
ZNF556-201ENST00000307635 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
ZNF556-201ENST00000307635 IDI1Q13907 227 aa13.05□□□□□ -0.32
ZNF556-201ENST00000307635 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
ZNF556-201ENST00000307635 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
ZNF556-201ENST00000307635 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
ZNF556-201ENST00000307635 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
ZNF556-201ENST00000307635 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
ZNF556-201ENST00000307635 FOXO3O43524 673 aa13.04□□□□□ -0.32
ZNF556-201ENST00000307635 HSP90AB4PQ58FF6 505 aa13.04□□□□□ -0.32
ZNF556-201ENST00000307635 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
ZNF556-201ENST00000307635 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
ZNF556-201ENST00000307635 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
ZNF556-201ENST00000307635 CCDC34Q96HJ3 373 aa13.04□□□□□ -0.32
ZNF556-201ENST00000307635 AK7Q96M32 723 aa13.04□□□□□ -0.32
ZNF556-201ENST00000307635 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
ZNF556-201ENST00000307635 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
ZNF556-201ENST00000307635 POLD1P28340 1107 aa13.03□□□□□ -0.32
ZNF556-201ENST00000307635 IFIT2P09913 472 aaKnown RBP13.02□□□□□ -0.32
ZNF556-201ENST00000307635 ZFYVE16Q7Z3T8 1539 aa13.02□□□□□ -0.33
ZNF556-201ENST00000307635 ZMYM3Q14202 1370 aa13.02□□□□□ -0.33
ZNF556-201ENST00000307635 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
ZNF556-201ENST00000307635 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
ZNF556-201ENST00000307635 ABCC5O15440 1437 aa13.01□□□□□ -0.33
ZNF556-201ENST00000307635 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
ZNF556-201ENST00000307635 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
ZNF556-201ENST00000307635 NEO1Q92859 1461 aa13.01□□□□□ -0.33
ZNF556-201ENST00000307635 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
ZNF556-201ENST00000307635 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 MAP3K1Q13233 1512 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 KIF3AQ9Y496 699 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 NCOA1Q15788 1441 aa13□□□□□ -0.33
ZNF556-201ENST00000307635 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
ZNF556-201ENST00000307635 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
ZNF556-201ENST00000307635 RASSF8Q8NHQ8 419 aa12.99□□□□□ -0.33
ZNF556-201ENST00000307635 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
ZNF556-201ENST00000307635 A0A087WZG4 1122 aa12.98□□□□□ -0.33
ZNF556-201ENST00000307635 APPP05067 770 aa12.98□□□□□ -0.33
ZNF556-201ENST00000307635 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
ZNF556-201ENST00000307635 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
ZNF556-201ENST00000307635 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
ZNF556-201ENST00000307635 CNNM1Q9NRU3 951 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms