RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 NALCNQ8IZF0 1738 aa38.16■■■■□ 3.7
HDAC3-201ENST00000305264 XIRP1Q702N8 1843 aaKnown RBP38.16■■■■□ 3.7
HDAC3-201ENST00000305264 TESK2Q96S53 571 aa38.15■■■■□ 3.7
HDAC3-201ENST00000305264 TMEM94Q12767 1356 aa38.14■■■■□ 3.7
HDAC3-201ENST00000305264 MINK1Q8N4C8 1332 aaPredicted RBP38.13■■■■□ 3.69
HDAC3-201ENST00000305264 SBNO2Q9Y2G9 1366 aa38.13■■■■□ 3.69
HDAC3-201ENST00000305264 ADGRB2O60241 1585 aa38.09■■■■□ 3.69
HDAC3-201ENST00000305264 ADGRL3Q9HAR2 1447 aa38.08■■■■□ 3.69
HDAC3-201ENST00000305264 TULP4Q9NRJ4 1543 aa38.07■■■■□ 3.68
HDAC3-201ENST00000305264 NCOA3Q9Y6Q9 1424 aa38.03■■■■□ 3.68
HDAC3-201ENST00000305264 DISP3Q9P2K9 1392 aa38.02■■■■□ 3.68
HDAC3-201ENST00000305264 C14orf37Q86TY3 774 aa38.02■■■■□ 3.68
HDAC3-201ENST00000305264 CDC42BPGQ6DT37 1551 aa38■■■■□ 3.67
HDAC3-201ENST00000305264 C11orf95C9JLR9 678 aaPredicted RBP37.95■■■■□ 3.67
HDAC3-201ENST00000305264 TMF1P82094 1093 aa37.95■■■■□ 3.67
HDAC3-201ENST00000305264 EVC2Q86UK5 1308 aa37.95■■■■□ 3.67
HDAC3-201ENST00000305264 FMN2Q9NZ56 1722 aa37.93■■■■□ 3.66
HDAC3-201ENST00000305264 WASLO00401 505 aaPredicted RBP37.93■■■■□ 3.66
HDAC3-201ENST00000305264 C19orf44Q9H6X5 657 aa37.92■■■■□ 3.66
HDAC3-201ENST00000305264 MSH6P52701 1360 aa37.92■■■■□ 3.66
HDAC3-201ENST00000305264 CDK19Q9BWU1 502 aa37.91■■■■□ 3.66
HDAC3-201ENST00000305264 SLC24A1O60721 1099 aa37.91■■■■□ 3.66
HDAC3-201ENST00000305264 DCCP43146 1447 aa37.89■■■■□ 3.66
HDAC3-201ENST00000305264 CABP2Q9NPB3 220 aa37.88■■■■□ 3.65
HDAC3-201ENST00000305264 SRPK2P78362 688 aaKnown RBP37.87■■■■□ 3.65
HDAC3-201ENST00000305264 USP32Q8NFA0 1604 aa37.87■■■■□ 3.65
HDAC3-201ENST00000305264 KIF7Q2M1P5 1343 aa37.85■■■■□ 3.65
HDAC3-201ENST00000305264 NUTM2FA1L443 756 aa37.84■■■■□ 3.65
HDAC3-201ENST00000305264 ATP7BP35670 1465 aa37.83■■■■□ 3.65
HDAC3-201ENST00000305264 WASHC2AQ641Q2 1341 aa37.83■■■■□ 3.65
HDAC3-201ENST00000305264 ZNF316A6NFI3 1004 aaPredicted RBP37.83■■■■□ 3.65
HDAC3-201ENST00000305264 RGPD8O14715 1765 aaPredicted RBP37.83■■■■□ 3.65
HDAC3-201ENST00000305264 CCDC7Q96M83 1385 aa37.81■■■■□ 3.64
HDAC3-201ENST00000305264 PRR36Q9H6K5 1346 aa37.81■■■■□ 3.64
HDAC3-201ENST00000305264 ATF3P18847 181 aa37.8■■■■□ 3.64
HDAC3-201ENST00000305264 POLR3GLQ9BT43 218 aa37.8■■■■□ 3.64
HDAC3-201ENST00000305264 CDCA8Q53HL2 280 aa37.79■■■■□ 3.64
HDAC3-201ENST00000305264 TOPAZ1Q8N9V7 1692 aa37.78■■■■□ 3.64
HDAC3-201ENST00000305264 MYOM1P52179 1685 aa37.78■■■■□ 3.64
HDAC3-201ENST00000305264 CADPS2Q86UW7 1296 aa37.78■■■■□ 3.64
HDAC3-201ENST00000305264 MST1RQ04912 1400 aa37.78■■■■□ 3.64
HDAC3-201ENST00000305264 ANKARQ7Z5J8 1434 aa37.77■■■■□ 3.64
HDAC3-201ENST00000305264 ATAD2Q6PL18 1390 aa37.75■■■■□ 3.63
HDAC3-201ENST00000305264 NUDT16Q96DE0 195 aaKnown RBP37.75■■■■□ 3.63
HDAC3-201ENST00000305264 PUS7Q96PZ0 661 aaKnown RBP37.75■■■■□ 3.63
HDAC3-201ENST00000305264 ITSN1Q15811 1721 aa37.74■■■■□ 3.63
HDAC3-201ENST00000305264 IQSEC2Q5JU85 1478 aa37.73■■■■□ 3.63
HDAC3-201ENST00000305264 C1orf167Q5SNV9 1468 aa37.72■■■■□ 3.63
HDAC3-201ENST00000305264 CERKQ8TCT0 537 aa37.72■■■■□ 3.63
HDAC3-201ENST00000305264 PPIP5K1Q6PFW1 1433 aa37.68■■■■□ 3.62
HDAC3-201ENST00000305264 CCDC61Q9Y6R9 512 aa37.67■■■■□ 3.62
HDAC3-201ENST00000305264 TMC1Q8TDI8 760 aa37.64■■■■□ 3.62
HDAC3-201ENST00000305264 CABP1Q9NZU7 370 aa37.63■■■■□ 3.61
HDAC3-201ENST00000305264 SLAIN2Q9P270 581 aa37.63■■■■□ 3.61
HDAC3-201ENST00000305264 SLC12A5Q9H2X9 1139 aa37.62■■■■□ 3.61
HDAC3-201ENST00000305264 ORAI2Q96SN7 254 aa37.62■■■■□ 3.61
HDAC3-201ENST00000305264 NINLQ9Y2I6 1382 aa37.61■■■■□ 3.61
HDAC3-201ENST00000305264 ESCO1Q5FWF5 840 aa37.6■■■■□ 3.61
HDAC3-201ENST00000305264 PMFBP1Q8TBY8 1022 aa37.58■■■■□ 3.61
HDAC3-201ENST00000305264 CD163L1Q9NR16 1453 aa37.58■■■■□ 3.61
HDAC3-201ENST00000305264 KIF1AQ12756 1690 aa37.57■■■■□ 3.61
HDAC3-201ENST00000305264 PLEKHG3A1L390 1219 aa37.55■■■■□ 3.6
HDAC3-201ENST00000305264 PHF8Q9UPP1 1060 aa37.55■■■■□ 3.6
HDAC3-201ENST00000305264 AKAP12Q02952 1782 aa37.54■■■■□ 3.6
HDAC3-201ENST00000305264 BRINP3Q76B58 766 aa37.53■■■■□ 3.6
HDAC3-201ENST00000305264 ROBO1Q9Y6N7 1651 aa37.52■■■■□ 3.6
HDAC3-201ENST00000305264 UBAP1LF5GYI3 381 aa37.52■■■■□ 3.6
HDAC3-201ENST00000305264 TOM1O60784 492 aa37.52■■■■□ 3.6
HDAC3-201ENST00000305264 A0A1W2PP64 1363 aa37.52■■■■□ 3.6
HDAC3-201ENST00000305264 ACEP12821 1306 aa37.51■■■■□ 3.6
HDAC3-201ENST00000305264 POLR3AO14802 1390 aaPredicted RBP37.5■■■■□ 3.59
HDAC3-201ENST00000305264 ANKRD36BQ8N2N9 1353 aa37.5■■■■□ 3.59
HDAC3-201ENST00000305264 DDX10Q13206 875 aaKnown RBP37.49■■■■□ 3.59
HDAC3-201ENST00000305264 CPSF1Q10570 1443 aaKnown RBP37.49■■■■□ 3.59
HDAC3-201ENST00000305264 MON2Q7Z3U7 1717 aa37.48■■■■□ 3.59
HDAC3-201ENST00000305264 NGDNQ8NEJ9 315 aaKnown RBP37.47■■■■□ 3.59
HDAC3-201ENST00000305264 PANK3Q9H999 370 aa37.47■■■■□ 3.59
HDAC3-201ENST00000305264 TERF2IPQ9NYB0 399 aa37.46■■■■□ 3.59
HDAC3-201ENST00000305264 FOXO3O43524 673 aa37.43■■■■□ 3.58
HDAC3-201ENST00000305264 HDGFL2Q7Z4V5 671 aaPredicted RBP37.43■■■■□ 3.58
HDAC3-201ENST00000305264 PIP4K2BP78356 416 aa37.42■■■■□ 3.58
HDAC3-201ENST00000305264 NRKQ7Z2Y5 1582 aa37.42■■■■□ 3.58
HDAC3-201ENST00000305264 DDX17Q92841 729 aaKnown RBP37.42■■■■□ 3.58
HDAC3-201ENST00000305264 NHSL1Q5SYE7 1610 aa37.42■■■■□ 3.58
HDAC3-201ENST00000305264 KTN1Q86UP2 1357 aaKnown RBP37.41■■■■□ 3.58
HDAC3-201ENST00000305264 USP6P35125 1406 aa37.41■■■■□ 3.58
HDAC3-201ENST00000305264 CARD14Q9BXL6 1004 aa37.4■■■■□ 3.58
HDAC3-201ENST00000305264 SCAF1Q9H7N4 1312 aaKnown RBP37.38■■■■□ 3.58
HDAC3-201ENST00000305264 NSD3Q9BZ95 1437 aa37.37■■■■□ 3.57
HDAC3-201ENST00000305264 XPCQ01831 940 aaPredicted RBP37.37■■■■□ 3.57
HDAC3-201ENST00000305264 ZNF692Q9BU19 519 aaPredicted RBP37.37■■■■□ 3.57
HDAC3-201ENST00000305264 NPHP3Q7Z494 1330 aa37.35■■■■□ 3.57
HDAC3-201ENST00000305264 PXDNQ92626 1479 aa37.34■■■■□ 3.57
HDAC3-201ENST00000305264 TRPM3Q9HCF6 1732 aaPredicted RBP37.34■■■■□ 3.57
HDAC3-201ENST00000305264 PSME1Q06323 249 aa37.34■■■■□ 3.57
HDAC3-201ENST00000305264 EDC4Q6P2E9 1401 aaKnown RBP37.34■■■■□ 3.57
HDAC3-201ENST00000305264 SSH2Q76I76 1423 aa37.33■■■■□ 3.57
HDAC3-201ENST00000305264 AHDC1Q5TGY3 1603 aaPredicted RBP37.33■■■■□ 3.57
HDAC3-201ENST00000305264 PER1O15534 1290 aaPredicted RBP37.31■■■■□ 3.56
HDAC3-201ENST00000305264 KRT28Q7Z3Y7 464 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms