RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 USP47Q96K76 1375 aa28.35■■■□□ 2.13
SCAMP3-201ENST00000302631 ADGRB2O60241 1585 aa28.35■■■□□ 2.13
SCAMP3-201ENST00000302631 QRICH2Q9H0J4 1663 aa28.35■■■□□ 2.13
SCAMP3-201ENST00000302631 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
SCAMP3-201ENST00000302631 DCCP43146 1447 aa28.33■■■□□ 2.13
SCAMP3-201ENST00000302631 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
SCAMP3-201ENST00000302631 MSH6P52701 1360 aa28.31■■■□□ 2.12
SCAMP3-201ENST00000302631 CDC42BPGQ6DT37 1551 aa28.31■■■□□ 2.12
SCAMP3-201ENST00000302631 SAFB2Q14151 953 aaKnown RBP eCLIP28.3■■■□□ 2.12
SCAMP3-201ENST00000302631 ST20-MTHFSA0A0A6YYL1 179 aa28.28■■■□□ 2.12
SCAMP3-201ENST00000302631 C14orf37Q86TY3 774 aa28.26■■■□□ 2.12
SCAMP3-201ENST00000302631 TESK2Q96S53 571 aa28.26■■■□□ 2.12
SCAMP3-201ENST00000302631 EIF4G2P78344 907 aaKnown RBP eCLIP28.26■■■□□ 2.112e-10■■■■□ 24.2
SCAMP3-201ENST00000302631 MINK1Q8N4C8 1332 aaPredicted RBP28.25■■■□□ 2.11
SCAMP3-201ENST00000302631 FMN2Q9NZ56 1722 aa28.25■■■□□ 2.11
SCAMP3-201ENST00000302631 CADPS2Q86UW7 1296 aa28.23■■■□□ 2.11
SCAMP3-201ENST00000302631 HSPA5P11021 654 aaKnown RBP28.22■■■□□ 2.11
SCAMP3-201ENST00000302631 WASLO00401 505 aaPredicted RBP28.21■■■□□ 2.11
SCAMP3-201ENST00000302631 HIRIP3Q9BW71 556 aaPredicted RBP28.21■■■□□ 2.11
SCAMP3-201ENST00000302631 TULP4Q9NRJ4 1543 aa28.21■■■□□ 2.11
SCAMP3-201ENST00000302631 SLC24A1O60721 1099 aa28.2■■■□□ 2.11
SCAMP3-201ENST00000302631 ATF3P18847 181 aa28.2■■■□□ 2.11
SCAMP3-201ENST00000302631 MST1RQ04912 1400 aa28.2■■■□□ 2.1
SCAMP3-201ENST00000302631 USP32Q8NFA0 1604 aa28.16■■■□□ 2.1
SCAMP3-201ENST00000302631 CDK19Q9BWU1 502 aa28.16■■■□□ 2.1
SCAMP3-201ENST00000302631 TOM1O60784 492 aa28.15■■■□□ 2.1
SCAMP3-201ENST00000302631 ANKARQ7Z5J8 1434 aa28.15■■■□□ 2.1
SCAMP3-201ENST00000302631 EVC2Q86UK5 1308 aa28.15■■■□□ 2.1
SCAMP3-201ENST00000302631 SLAIN2Q9P270 581 aa28.14■■■□□ 2.1
SCAMP3-201ENST00000302631 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.09
SCAMP3-201ENST00000302631 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.09
SCAMP3-201ENST00000302631 PUS7Q96PZ0 661 aaKnown RBP28.13■■■□□ 2.09
SCAMP3-201ENST00000302631 ATP7BP35670 1465 aa28.11■■■□□ 2.09
SCAMP3-201ENST00000302631 PRR36Q9H6K5 1346 aa28.1■■■□□ 2.09
SCAMP3-201ENST00000302631 UBAP1LF5GYI3 381 aa28.09■■■□□ 2.09
SCAMP3-201ENST00000302631 TMF1P82094 1093 aa28.09■■■□□ 2.09
SCAMP3-201ENST00000302631 DISP3Q9P2K9 1392 aa28.08■■■□□ 2.09
SCAMP3-201ENST00000302631 TOPAZ1Q8N9V7 1692 aa28.07■■■□□ 2.08
SCAMP3-201ENST00000302631 NUDT16Q96DE0 195 aaKnown RBP28.07■■■□□ 2.08
SCAMP3-201ENST00000302631 ITSN1Q15811 1721 aa28.07■■■□□ 2.08
SCAMP3-201ENST00000302631 CABP2Q9NPB3 220 aa28.06■■■□□ 2.08
SCAMP3-201ENST00000302631 SRPK2P78362 688 aaKnown RBP28.05■■■□□ 2.08
SCAMP3-201ENST00000302631 NUTM2FA1L443 756 aa28.04■■■□□ 2.08
SCAMP3-201ENST00000302631 ROBO1Q9Y6N7 1651 aa28.03■■■□□ 2.08
SCAMP3-201ENST00000302631 CCDC61Q9Y6R9 512 aa28.03■■■□□ 2.08
SCAMP3-201ENST00000302631 ATAD2Q6PL18 1390 aa28.03■■■□□ 2.08
SCAMP3-201ENST00000302631 BRINP3Q76B58 766 aa28.01■■■□□ 2.08
SCAMP3-201ENST00000302631 ORAI2Q96SN7 254 aa28.01■■■□□ 2.08
SCAMP3-201ENST00000302631 KIF1AQ12756 1690 aa28.01■■■□□ 2.07
SCAMP3-201ENST00000302631 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
SCAMP3-201ENST00000302631 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
SCAMP3-201ENST00000302631 C11orf95C9JLR9 678 aaPredicted RBP27.99■■■□□ 2.07
SCAMP3-201ENST00000302631 ESCO1Q5FWF5 840 aa27.99■■■□□ 2.07
SCAMP3-201ENST00000302631 NHSL1Q5SYE7 1610 aa27.97■■■□□ 2.07
SCAMP3-201ENST00000302631 PHF8Q9UPP1 1060 aa27.96■■■□□ 2.07
SCAMP3-201ENST00000302631 FBXO41Q8TF61 875 aa27.95■■■□□ 2.07
SCAMP3-201ENST00000302631 PPIP5K1Q6PFW1 1433 aa27.95■■■□□ 2.06
SCAMP3-201ENST00000302631 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
SCAMP3-201ENST00000302631 POLR3AO14802 1390 aaPredicted RBP27.93■■■□□ 2.06
SCAMP3-201ENST00000302631 AHDC1Q5TGY3 1603 aaPredicted RBP27.93■■■□□ 2.06
SCAMP3-201ENST00000302631 NINLQ9Y2I6 1382 aa27.93■■■□□ 2.06
SCAMP3-201ENST00000302631 CABP1Q9NZU7 370 aa27.92■■■□□ 2.06
SCAMP3-201ENST00000302631 MYOM1P52179 1685 aa27.92■■■□□ 2.06
SCAMP3-201ENST00000302631 PMFBP1Q8TBY8 1022 aa27.9■■■□□ 2.06
SCAMP3-201ENST00000302631 KIF7Q2M1P5 1343 aa27.9■■■□□ 2.06
SCAMP3-201ENST00000302631 AKAP12Q02952 1782 aa27.89■■■□□ 2.06
SCAMP3-201ENST00000302631 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
SCAMP3-201ENST00000302631 ACEP12821 1306 aa27.88■■■□□ 2.05
SCAMP3-201ENST00000302631 CPSF1Q10570 1443 aaKnown RBP27.88■■■□□ 2.05
SCAMP3-201ENST00000302631 SLC12A5Q9H2X9 1139 aa27.87■■■□□ 2.05
SCAMP3-201ENST00000302631 NPHP3Q7Z494 1330 aa27.87■■■□□ 2.05
SCAMP3-201ENST00000302631 CCDC7Q96M83 1385 aa27.87■■■□□ 2.05
SCAMP3-201ENST00000302631 FOXO3O43524 673 aa27.86■■■□□ 2.05
SCAMP3-201ENST00000302631 WASHC2AQ641Q2 1341 aa27.86■■■□□ 2.05
SCAMP3-201ENST00000302631 SCAF1Q9H7N4 1312 aaKnown RBP27.86■■■□□ 2.05
SCAMP3-201ENST00000302631 PXDNQ92626 1479 aa27.86■■■□□ 2.05
SCAMP3-201ENST00000302631 SOS2Q07890 1332 aaPredicted RBP27.85■■■□□ 2.05
SCAMP3-201ENST00000302631 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
SCAMP3-201ENST00000302631 NGDNQ8NEJ9 315 aaKnown RBP27.84■■■□□ 2.05
SCAMP3-201ENST00000302631 MON2Q7Z3U7 1717 aa27.83■■■□□ 2.05
SCAMP3-201ENST00000302631 COL16A1Q07092 1604 aaPredicted RBP27.83■■■□□ 2.05
SCAMP3-201ENST00000302631 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
SCAMP3-201ENST00000302631 DDX17Q92841 729 aaKnown RBP27.83■■■□□ 2.05
SCAMP3-201ENST00000302631 ZNF692Q9BU19 519 aaPredicted RBP27.83■■■□□ 2.05
SCAMP3-201ENST00000302631 TRPM3Q9HCF6 1732 aaPredicted RBP27.82■■■□□ 2.04
SCAMP3-201ENST00000302631 BRD4O60885 1362 aaPredicted RBP27.81■■■□□ 2.04
SCAMP3-201ENST00000302631 SSH2Q76I76 1423 aa27.8■■■□□ 2.04
SCAMP3-201ENST00000302631 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
SCAMP3-201ENST00000302631 USP6P35125 1406 aa27.8■■■□□ 2.04
SCAMP3-201ENST00000302631 ANKRD36BQ8N2N9 1353 aa27.79■■■□□ 2.04
SCAMP3-201ENST00000302631 A0A1W2PP64 1363 aa27.79■■■□□ 2.04
SCAMP3-201ENST00000302631 PSME1Q06323 249 aa27.78■■■□□ 2.04
SCAMP3-201ENST00000302631 TERF2IPQ9NYB0 399 aa27.78■■■□□ 2.04
SCAMP3-201ENST00000302631 SBNO1A3KN83 1393 aa27.78■■■□□ 2.04
SCAMP3-201ENST00000302631 NRKQ7Z2Y5 1582 aa27.77■■■□□ 2.04
SCAMP3-201ENST00000302631 HSPA1LP34931 641 aa27.75■■■□□ 2.03
SCAMP3-201ENST00000302631 HDGFL2Q7Z4V5 671 aaPredicted RBP27.75■■■□□ 2.03
SCAMP3-201ENST00000302631 POLR3GLQ9BT43 218 aa27.75■■■□□ 2.03
SCAMP3-201ENST00000302631 KTN1Q86UP2 1357 aaKnown RBP27.74■■■□□ 2.03
SCAMP3-201ENST00000302631 ALS2Q96Q42 1657 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms