RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FOXD4L3Q6VB84 417 aaPredicted RBP18.07■□□□□ 0.48
CDT1-201ENST00000301019 RBM27Q9P2N5 1060 aaKnown RBP18.07■□□□□ 0.48
CDT1-201ENST00000301019 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
CDT1-201ENST00000301019 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
CDT1-201ENST00000301019 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
CDT1-201ENST00000301019 CCDC173Q0VFZ6 552 aa18.06■□□□□ 0.48
CDT1-201ENST00000301019 MCTP1Q6DN14 999 aa18.06■□□□□ 0.48
CDT1-201ENST00000301019 C17orf53Q8N3J3 647 aaPredicted RBP18.06■□□□□ 0.48
CDT1-201ENST00000301019 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
CDT1-201ENST00000301019 ARHGEF5Q12774 1597 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
CDT1-201ENST00000301019 RSPH4AQ5TD94 716 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
CDT1-201ENST00000301019 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 GBP4Q96PP9 640 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
CDT1-201ENST00000301019 ADGRL2O95490 1459 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 CCDC141Q6ZP82 1450 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 PLEKHH2Q8IVE3 1493 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
CDT1-201ENST00000301019 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
CDT1-201ENST00000301019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDT1-201ENST00000301019 ARAP3Q8WWN8 1544 aa18.03■□□□□ 0.48
CDT1-201ENST00000301019 PPP4R3BQ5MIZ7 849 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 RBSNQ9H1K0 784 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
CDT1-201ENST00000301019 SMAP1Q8IYB5 467 aaPredicted RBP18■□□□□ 0.47
CDT1-201ENST00000301019 CGNQ9P2M7 1197 aaKnown RBP18■□□□□ 0.47
CDT1-201ENST00000301019 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
CDT1-201ENST00000301019 DISP3Q9P2K9 1392 aa18■□□□□ 0.47
CDT1-201ENST00000301019 CGNL1Q0VF96 1302 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 FANCAO15360 1455 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
CDT1-201ENST00000301019 PLCB2Q00722 1185 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 E9PSI1 815 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
CDT1-201ENST00000301019 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
CDT1-201ENST00000301019 PDIA4P13667 645 aaKnown RBP17.98■□□□□ 0.47
CDT1-201ENST00000301019 ABCC1P33527 1531 aa17.98■□□□□ 0.47
CDT1-201ENST00000301019 PKP1Q13835 747 aa17.97■□□□□ 0.47
CDT1-201ENST00000301019 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.97■□□□□ 0.47
CDT1-201ENST00000301019 PAXIP1Q6ZW49 1069 aaPredicted RBP17.96■□□□□ 0.47
CDT1-201ENST00000301019 NUP155O75694 1391 aa17.96■□□□□ 0.47
CDT1-201ENST00000301019 CD109Q6YHK3 1445 aa17.96■□□□□ 0.47
CDT1-201ENST00000301019 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
CDT1-201ENST00000301019 ATP2B3Q16720 1220 aa17.96■□□□□ 0.47
CDT1-201ENST00000301019 GOLGA6L22H0YM25 854 aa17.95■□□□□ 0.46
CDT1-201ENST00000301019 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
CDT1-201ENST00000301019 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
CDT1-201ENST00000301019 PRPF40AO75400 957 aaKnown RBP17.94■□□□□ 0.46
CDT1-201ENST00000301019 DMTNQ08495 405 aa17.94■□□□□ 0.46
CDT1-201ENST00000301019 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
CDT1-201ENST00000301019 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
CDT1-201ENST00000301019 MAP7D2Q96T17 732 aa17.94■□□□□ 0.46
CDT1-201ENST00000301019 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
CDT1-201ENST00000301019 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
CDT1-201ENST00000301019 SYCE3A1L190 88 aa17.93■□□□□ 0.46
CDT1-201ENST00000301019 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
CDT1-201ENST00000301019 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
CDT1-201ENST00000301019 TRERF1Q96PN7 1200 aa17.93■□□□□ 0.46
CDT1-201ENST00000301019 PPP1R9BQ96SB3 815 aa17.93■□□□□ 0.46
CDT1-201ENST00000301019 CCDC94Q9BW85 323 aaPredicted RBP17.92■□□□□ 0.46
CDT1-201ENST00000301019 MAST1Q9Y2H9 1570 aa17.92■□□□□ 0.46
CDT1-201ENST00000301019 ZSCAN23Q3MJ62 389 aa17.92■□□□□ 0.46
CDT1-201ENST00000301019 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
CDT1-201ENST00000301019 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
CDT1-201ENST00000301019 SCAPERQ9BY12 1400 aa17.91■□□□□ 0.46
CDT1-201ENST00000301019 RAB3GAP1Q15042 981 aa17.9■□□□□ 0.46
CDT1-201ENST00000301019 CERS3Q8IU89 383 aa17.9■□□□□ 0.46
CDT1-201ENST00000301019 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
CDT1-201ENST00000301019 NOL7Q9UMY1 257 aaKnown RBP17.9■□□□□ 0.46
CDT1-201ENST00000301019 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
CDT1-201ENST00000301019 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.46
CDT1-201ENST00000301019 ZNF771Q7L3S4 317 aaPredicted RBP17.89■□□□□ 0.46
CDT1-201ENST00000301019 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
CDT1-201ENST00000301019 KDM5CP41229 1560 aa17.89■□□□□ 0.45
CDT1-201ENST00000301019 TMF1P82094 1093 aa17.89■□□□□ 0.45
CDT1-201ENST00000301019 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
CDT1-201ENST00000301019 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
CDT1-201ENST00000301019 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
CDT1-201ENST00000301019 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
CDT1-201ENST00000301019 SKOR2Q2VWA4 1001 aaPredicted RBP17.88■□□□□ 0.45
CDT1-201ENST00000301019 U2AF2P26368 475 aaKnown RBP eCLIP17.88■□□□□ 0.45
CDT1-201ENST00000301019 SASS6Q6UVJ0 657 aa17.88■□□□□ 0.45
CDT1-201ENST00000301019 NSFL1CQ9UNZ2 370 aaKnown RBP17.88■□□□□ 0.45
CDT1-201ENST00000301019 ZKSCAN5Q9Y2L8 839 aa17.88■□□□□ 0.45
CDT1-201ENST00000301019 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
CDT1-201ENST00000301019 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
CDT1-201ENST00000301019 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
CDT1-201ENST00000301019 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms