RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.65
TMED3-201ENST00000299705 SAFB2Q14151 953 aaKnown RBP eCLIP25.33■■□□□ 1.65
TMED3-201ENST00000299705 ADGRL3Q9HAR2 1447 aa25.32■■□□□ 1.64
TMED3-201ENST00000299705 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
TMED3-201ENST00000299705 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
TMED3-201ENST00000299705 TESK2Q96S53 571 aa25.3■■□□□ 1.64
TMED3-201ENST00000299705 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
TMED3-201ENST00000299705 NALCNQ8IZF0 1738 aa25.29■■□□□ 1.64
TMED3-201ENST00000299705 CERKQ8TCT0 537 aa25.29■■□□□ 1.64
TMED3-201ENST00000299705 C19orf44Q9H6X5 657 aa25.29■■□□□ 1.64
TMED3-201ENST00000299705 C14orf37Q86TY3 774 aa25.28■■□□□ 1.64
TMED3-201ENST00000299705 MINK1Q8N4C8 1332 aaPredicted RBP25.28■■□□□ 1.64
TMED3-201ENST00000299705 DCCP43146 1447 aa25.26■■□□□ 1.63
TMED3-201ENST00000299705 MSH6P52701 1360 aa25.26■■□□□ 1.63
TMED3-201ENST00000299705 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.63
TMED3-201ENST00000299705 HIRIP3Q9BW71 556 aaPredicted RBP25.25■■□□□ 1.63
TMED3-201ENST00000299705 CDC42BPGQ6DT37 1551 aa25.25■■□□□ 1.63
TMED3-201ENST00000299705 WASLO00401 505 aaPredicted RBP25.22■■□□□ 1.63
TMED3-201ENST00000299705 EVC2Q86UK5 1308 aa25.22■■□□□ 1.63
TMED3-201ENST00000299705 TULP4Q9NRJ4 1543 aa25.21■■□□□ 1.63
TMED3-201ENST00000299705 TMF1P82094 1093 aa25.21■■□□□ 1.63
TMED3-201ENST00000299705 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
TMED3-201ENST00000299705 ATF3P18847 181 aa25.19■■□□□ 1.62
TMED3-201ENST00000299705 CDK19Q9BWU1 502 aa25.19■■□□□ 1.62
TMED3-201ENST00000299705 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
TMED3-201ENST00000299705 PUS7Q96PZ0 661 aaKnown RBP25.17■■□□□ 1.62
TMED3-201ENST00000299705 FBXO41Q8TF61 875 aa25.15■■□□□ 1.62
TMED3-201ENST00000299705 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
TMED3-201ENST00000299705 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
TMED3-201ENST00000299705 ANKARQ7Z5J8 1434 aa25.14■■□□□ 1.61
TMED3-201ENST00000299705 SRPK2P78362 688 aaKnown RBP25.13■■□□□ 1.61
TMED3-201ENST00000299705 MST1RQ04912 1400 aa25.12■■□□□ 1.61
TMED3-201ENST00000299705 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
TMED3-201ENST00000299705 ATAD2Q6PL18 1390 aa25.1■■□□□ 1.61
TMED3-201ENST00000299705 USP32Q8NFA0 1604 aa25.09■■□□□ 1.61
TMED3-201ENST00000299705 C11orf95C9JLR9 678 aaPredicted RBP25.09■■□□□ 1.61
TMED3-201ENST00000299705 NUDT16Q96DE0 195 aaKnown RBP25.09■■□□□ 1.61
TMED3-201ENST00000299705 ATP7BP35670 1465 aa25.09■■□□□ 1.61
TMED3-201ENST00000299705 PRR36Q9H6K5 1346 aa25.09■■□□□ 1.61
TMED3-201ENST00000299705 ILDR1Q86SU0 546 aaPredicted RBP25.09■■□□□ 1.61
TMED3-201ENST00000299705 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
TMED3-201ENST00000299705 C1orf167Q5SNV9 1468 aa25.08■■□□□ 1.61
TMED3-201ENST00000299705 NUTM2FA1L443 756 aa25.08■■□□□ 1.6
TMED3-201ENST00000299705 TOM1O60784 492 aa25.08■■□□□ 1.6
TMED3-201ENST00000299705 CCDC61Q9Y6R9 512 aa25.07■■□□□ 1.6
TMED3-201ENST00000299705 ITSN1Q15811 1721 aa25.05■■□□□ 1.6
TMED3-201ENST00000299705 RGPD8O14715 1765 aaPredicted RBP25.04■■□□□ 1.6
TMED3-201ENST00000299705 KIF7Q2M1P5 1343 aa25.04■■□□□ 1.6
TMED3-201ENST00000299705 TOPAZ1Q8N9V7 1692 aa25.04■■□□□ 1.6
TMED3-201ENST00000299705 CCDC7Q96M83 1385 aa25.02■■□□□ 1.6
TMED3-201ENST00000299705 NINLQ9Y2I6 1382 aa25.02■■□□□ 1.6
TMED3-201ENST00000299705 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
TMED3-201ENST00000299705 WASHC2AQ641Q2 1341 aa25.01■■□□□ 1.59
TMED3-201ENST00000299705 ESCO1Q5FWF5 840 aa25.01■■□□□ 1.59
TMED3-201ENST00000299705 PPIP5K1Q6PFW1 1433 aa25■■□□□ 1.59
TMED3-201ENST00000299705 PLEKHG3A1L390 1219 aa25■■□□□ 1.59
TMED3-201ENST00000299705 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
TMED3-201ENST00000299705 ORAI2Q96SN7 254 aa25■■□□□ 1.59
TMED3-201ENST00000299705 CABP1Q9NZU7 370 aa24.99■■□□□ 1.59
TMED3-201ENST00000299705 PHF8Q9UPP1 1060 aa24.99■■□□□ 1.59
TMED3-201ENST00000299705 KIF1AQ12756 1690 aa24.98■■□□□ 1.59
TMED3-201ENST00000299705 BRINP3Q76B58 766 aa24.97■■□□□ 1.59
TMED3-201ENST00000299705 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
TMED3-201ENST00000299705 MYOM1P52179 1685 aa24.96■■□□□ 1.59
TMED3-201ENST00000299705 TMC1Q8TDI8 760 aa24.96■■□□□ 1.59
TMED3-201ENST00000299705 SLC12A5Q9H2X9 1139 aa24.95■■□□□ 1.58
TMED3-201ENST00000299705 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
TMED3-201ENST00000299705 PMFBP1Q8TBY8 1022 aa24.94■■□□□ 1.58
TMED3-201ENST00000299705 ROBO1Q9Y6N7 1651 aa24.94■■□□□ 1.58
TMED3-201ENST00000299705 ACEP12821 1306 aa24.92■■□□□ 1.58
TMED3-201ENST00000299705 NGDNQ8NEJ9 315 aaKnown RBP24.91■■□□□ 1.58
TMED3-201ENST00000299705 TERF2IPQ9NYB0 399 aa24.91■■□□□ 1.58
TMED3-201ENST00000299705 CPSF1Q10570 1443 aaKnown RBP24.91■■□□□ 1.58
TMED3-201ENST00000299705 CD163L1Q9NR16 1453 aa24.9■■□□□ 1.58
TMED3-201ENST00000299705 PIP4K2BP78356 416 aa24.9■■□□□ 1.58
TMED3-201ENST00000299705 ZNF692Q9BU19 519 aaPredicted RBP24.9■■□□□ 1.58
TMED3-201ENST00000299705 ANKRD36BQ8N2N9 1353 aa24.9■■□□□ 1.58
TMED3-201ENST00000299705 NPHP3Q7Z494 1330 aa24.89■■□□□ 1.57
TMED3-201ENST00000299705 FOXO3O43524 673 aa24.89■■□□□ 1.57
TMED3-201ENST00000299705 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.57
TMED3-201ENST00000299705 AKAP12Q02952 1782 aa24.87■■□□□ 1.57
TMED3-201ENST00000299705 NHSL1Q5SYE7 1610 aa24.87■■□□□ 1.57
TMED3-201ENST00000299705 A0A1W2PP64 1363 aa24.86■■□□□ 1.57
TMED3-201ENST00000299705 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
TMED3-201ENST00000299705 AHDC1Q5TGY3 1603 aaPredicted RBP24.85■■□□□ 1.57
TMED3-201ENST00000299705 BRD4O60885 1362 aaPredicted RBP24.85■■□□□ 1.57
TMED3-201ENST00000299705 PSME1Q06323 249 aa24.84■■□□□ 1.57
TMED3-201ENST00000299705 KTN1Q86UP2 1357 aaKnown RBP24.84■■□□□ 1.57
TMED3-201ENST00000299705 USP6P35125 1406 aa24.83■■□□□ 1.57
TMED3-201ENST00000299705 PANK3Q9H999 370 aa24.83■■□□□ 1.57
TMED3-201ENST00000299705 MON2Q7Z3U7 1717 aa24.83■■□□□ 1.57
TMED3-201ENST00000299705 KRT28Q7Z3Y7 464 aa24.83■■□□□ 1.56
TMED3-201ENST00000299705 PXDNQ92626 1479 aa24.82■■□□□ 1.56
TMED3-201ENST00000299705 SOS2Q07890 1332 aaPredicted RBP24.82■■□□□ 1.56
TMED3-201ENST00000299705 DDX17Q92841 729 aaKnown RBP24.81■■□□□ 1.56
TMED3-201ENST00000299705 SSH2Q76I76 1423 aa24.8■■□□□ 1.56
TMED3-201ENST00000299705 EDC4Q6P2E9 1401 aaKnown RBP24.8■■□□□ 1.56
TMED3-201ENST00000299705 SBNO1A3KN83 1393 aa24.78■■□□□ 1.56
TMED3-201ENST00000299705 CARD14Q9BXL6 1004 aa24.78■■□□□ 1.56
TMED3-201ENST00000299705 NRKQ7Z2Y5 1582 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms