RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 JAKMIP3Q5VZ66 844 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 NOC2LQ9Y3T9 749 aaKnown RBP8.94□□□□□ -0.98
TSC1-201ENST00000298552 CSB-PGBD3P0DP91 1061 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
TSC1-201ENST00000298552 ROCK1Q13464 1354 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 KIF3CO14782 793 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 TMEM87AQ8NBN3 555 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 USH1CQ9Y6N9 552 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 DHX16O60231 1041 aaKnown RBP8.94□□□□□ -0.98
TSC1-201ENST00000298552 SMC6Q96SB8 1091 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 TRIM35Q9UPQ4 493 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 CGNL1Q0VF96 1302 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 ATP6V1E1P36543 226 aa8.94□□□□□ -0.98
TSC1-201ENST00000298552 CCDC96Q2M329 555 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 RAB3IL1Q8TBN0 382 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 CCDC39Q9UFE4 941 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 MKRN1Q9UHC7 482 aaKnown RBP8.93□□□□□ -0.98
TSC1-201ENST00000298552 DNAAF4Q8WXU2 420 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 TIGD1Q96MW7 591 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 SASS6Q6UVJ0 657 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 LUZP1Q86V48 1076 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
TSC1-201ENST00000298552 CCDC27Q2M243 656 aa8.92□□□□□ -0.98
TSC1-201ENST00000298552 ITPRIPQ8IWB1 547 aa8.92□□□□□ -0.98
TSC1-201ENST00000298552 NOL3O60936 208 aaKnown RBP8.92□□□□□ -0.98
TSC1-201ENST00000298552 PIBF1Q8WXW3 757 aa8.92□□□□□ -0.98
TSC1-201ENST00000298552 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
TSC1-201ENST00000298552 REC8O95072 547 aa8.92□□□□□ -0.98
TSC1-201ENST00000298552 RBM33Q96EV2 1170 aaKnown RBP8.92□□□□□ -0.98
TSC1-201ENST00000298552 CCDC73Q6ZRK6 1079 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 DNAJC2Q99543 621 aaKnown RBP8.91□□□□□ -0.98
TSC1-201ENST00000298552 POLE3Q9NRF9 147 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 GCOM1H8Y6P7 765 aaPredicted RBP8.91□□□□□ -0.98
TSC1-201ENST00000298552 MYZAPP0CAP1 466 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 SART3Q15020 963 aaKnown RBP8.91□□□□□ -0.98
TSC1-201ENST00000298552 CCDC14Q49A88 953 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 MICALCLQ6ZW33 695 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 TSNARE1Q96NA8 513 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 TRIM5Q9C035 493 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 TIMELESSQ9UNS1 1208 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 WDR66Q8TBY9 1149 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 PPFIBP2Q8ND30 876 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 SMC2O95347 1197 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 ZNF592Q92610 1267 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 ARID3AQ99856 593 aa8.91□□□□□ -0.98
TSC1-201ENST00000298552 TMCO3Q6UWJ1 677 aa8.9□□□□□ -0.98
TSC1-201ENST00000298552 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.98
TSC1-201ENST00000298552 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.99
TSC1-201ENST00000298552 PLEKHD1A6NEE1 506 aa8.9□□□□□ -0.99
TSC1-201ENST00000298552 MAP2K1Q02750 393 aaPredicted RBP8.89□□□□□ -0.99
TSC1-201ENST00000298552 CCDC150Q8NCX0 1101 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 CBX1P83916 185 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 CCDC181Q5TID7 509 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 GOLGA1Q92805 767 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 TTC12Q9H892 705 aaPredicted RBP8.89□□□□□ -0.99
TSC1-201ENST00000298552 TAOK3Q9H2K8 898 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 SUDS3Q9H7L9 328 aaPredicted RBP8.89□□□□□ -0.99
TSC1-201ENST00000298552 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
TSC1-201ENST00000298552 KIF5CO60282 957 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 MCTP1Q6DN14 999 aa8.89□□□□□ -0.99
TSC1-201ENST00000298552 ZNF330Q9Y3S2 320 aaPredicted RBP8.89□□□□□ -0.99
TSC1-201ENST00000298552 STMN1P16949 149 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 CENPHQ9H3R5 247 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 PPFIA2O75334 1257 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 KIF5AQ12840 1032 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 GBP3Q9H0R5 595 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 COMMD10Q9Y6G5 202 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 WDR63Q8IWG1 891 aa8.88□□□□□ -0.99
TSC1-201ENST00000298552 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
TSC1-201ENST00000298552 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 SEPT8Q92599 483 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 WASHC2CQ9Y4E1 1318 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 TERF1P54274 439 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 PPP4R3AQ6IN85 833 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 RAD21O60216 631 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 KIF4AO95239 1232 aa8.87□□□□□ -0.99
TSC1-201ENST00000298552 NAP1L3Q99457 506 aaPredicted RBP8.87□□□□□ -0.99
TSC1-201ENST00000298552 MICAL3Q7RTP6 2002 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 MAP4K4O95819 1239 aaPredicted RBP8.86□□□□□ -0.99
TSC1-201ENST00000298552 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
TSC1-201ENST00000298552 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
TSC1-201ENST00000298552 ANAPC4Q9UJX5 808 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 CLIP1P30622 1438 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 CEP162Q5TB80 1403 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 NFXL1Q6ZNB6 911 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 CHMP2AO43633 222 aa8.86□□□□□ -0.99
TSC1-201ENST00000298552 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
TSC1-201ENST00000298552 DZIP1Q86YF9 867 aaKnown RBP8.85□□□□□ -0.99
TSC1-201ENST00000298552 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
TSC1-201ENST00000298552 SH3BGRP55822 239 aaPredicted RBP8.85□□□□□ -0.99
TSC1-201ENST00000298552 PDCP20941 246 aa8.85□□□□□ -0.99
TSC1-201ENST00000298552 SPECC1LQ69YQ0 1117 aa8.85□□□□□ -0.99
TSC1-201ENST00000298552 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
TSC1-201ENST00000298552 CCDC89Q8N998 374 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms