RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GBP2P32456 591 aaPredicted RBP14.51□□□□□ -0.09
PCF11-201ENST00000298281 MATR3P43243 847 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCF11-201ENST00000298281 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
PCF11-201ENST00000298281 TSPYL1Q9H0U9 437 aa14.51□□□□□ -0.09
PCF11-201ENST00000298281 IFIT2P09913 472 aaKnown RBP14.5□□□□□ -0.09
PCF11-201ENST00000298281 BICD2Q8TD16 824 aa14.5□□□□□ -0.09
PCF11-201ENST00000298281 AAMPQ13685 434 aa14.5□□□□□ -0.09
PCF11-201ENST00000298281 SAFBQ15424 915 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCF11-201ENST00000298281 DYDC1Q8WWB3 177 aa14.5□□□□□ -0.09
PCF11-201ENST00000298281 ERLIN2O94905 339 aa14.5□□□□□ -0.09
PCF11-201ENST00000298281 BRMS1Q9HCU9 246 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 PANK3Q9H999 370 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 RAPGEF2Q9Y4G8 1499 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 MNS1Q8NEH6 495 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
PCF11-201ENST00000298281 KDM4AO75164 1064 aa14.48□□□□□ -0.09
PCF11-201ENST00000298281 CDK5RAP3Q96JB5 506 aa14.48□□□□□ -0.09
PCF11-201ENST00000298281 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
PCF11-201ENST00000298281 PSMD1Q99460 953 aa14.47□□□□□ -0.09
PCF11-201ENST00000298281 ANO2Q9NQ90 1003 aa14.47□□□□□ -0.09
PCF11-201ENST00000298281 G3BP1Q13283 466 aaKnown RBP eCLIP14.47□□□□□ -0.09
PCF11-201ENST00000298281 SASS6Q6UVJ0 657 aa14.47□□□□□ -0.09
PCF11-201ENST00000298281 DDX23Q9BUQ8 820 aaKnown RBP14.47□□□□□ -0.09
PCF11-201ENST00000298281 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
PCF11-201ENST00000298281 SF3B2Q13435 895 aaKnown RBP14.47□□□□□ -0.09
PCF11-201ENST00000298281 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
PCF11-201ENST00000298281 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 ATP2B2Q01814 1243 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 ZBED9Q6R2W3 1325 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 ERC2O15083 957 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 OLFM4Q6UX06 510 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 CHMP5Q9NZZ3 219 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 NUCB2P80303 420 aa14.46□□□□□ -0.09
PCF11-201ENST00000298281 DESP17661 470 aa14.45□□□□□ -0.1
PCF11-201ENST00000298281 PDE4AP27815 886 aa14.45□□□□□ -0.1
PCF11-201ENST00000298281 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
PCF11-201ENST00000298281 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
PCF11-201ENST00000298281 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
PCF11-201ENST00000298281 WASHC2AQ641Q2 1341 aa14.45□□□□□ -0.1
PCF11-201ENST00000298281 TAX1BP1Q86VP1 789 aa14.45□□□□□ -0.1
PCF11-201ENST00000298281 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
PCF11-201ENST00000298281 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
PCF11-201ENST00000298281 RRP1P56182 461 aaKnown RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 GOLGA6L10A6NI86 522 aa14.44□□□□□ -0.1
PCF11-201ENST00000298281 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 TRIM21P19474 475 aaKnown RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 CBX1P83916 185 aa14.44□□□□□ -0.1
PCF11-201ENST00000298281 GSE1Q14687 1217 aa14.44□□□□□ -0.1
PCF11-201ENST00000298281 INTS3Q68E01 1043 aaKnown RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 AXDND1Q5T1B0 1012 aaPredicted RBP14.44□□□□□ -0.1
PCF11-201ENST00000298281 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
PCF11-201ENST00000298281 PLIN1O60240 522 aa14.43□□□□□ -0.1
PCF11-201ENST00000298281 MAGEC2Q9UBF1 373 aaPredicted RBP14.43□□□□□ -0.1
PCF11-201ENST00000298281 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
PCF11-201ENST00000298281 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
PCF11-201ENST00000298281 CCDC73Q6ZRK6 1079 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
PCF11-201ENST00000298281 IFT57Q9NWB7 429 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 XBP1P17861 261 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 DZIP1LQ8IYY4 767 aaKnown RBP14.42□□□□□ -0.1
PCF11-201ENST00000298281 CENPHQ9H3R5 247 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
PCF11-201ENST00000298281 INCENPQ9NQS7 918 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
PCF11-201ENST00000298281 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
PCF11-201ENST00000298281 RALYLQ86SE5 291 aaKnown RBP14.41□□□□□ -0.1
PCF11-201ENST00000298281 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 NAT10Q9H0A0 1025 aaKnown RBP14.41□□□□□ -0.1
PCF11-201ENST00000298281 PSME1Q06323 249 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 ERCC4Q92889 916 aaPredicted RBP14.41□□□□□ -0.1
PCF11-201ENST00000298281 GOLGA6L7A0A1B0GV03 622 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 ANAPC15P60006 121 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 GNAI1P63096 354 aa14.41□□□□□ -0.1
PCF11-201ENST00000298281 GOLGA6L10A0A0M3HER8 536 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 USP47Q96K76 1375 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 CCDC112Q8NEF3 446 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 BCL2L13Q9BXK5 485 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
PCF11-201ENST00000298281 HOMER2Q9NSB8 354 aa14.4□□□□□ -0.1
PCF11-201ENST00000298281 PAXIP1Q6ZW49 1069 aaPredicted RBP14.4□□□□□ -0.1
PCF11-201ENST00000298281 MIA2Q96PC5 1412 aa14.39□□□□□ -0.11
PCF11-201ENST00000298281 PRKRIP1Q9H875 184 aaPredicted RBP14.39□□□□□ -0.11
PCF11-201ENST00000298281 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
PCF11-201ENST00000298281 FHOD3Q2V2M9 1422 aa14.39□□□□□ -0.11
PCF11-201ENST00000298281 STAMBPO95630 424 aa14.38□□□□□ -0.11
PCF11-201ENST00000298281 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
PCF11-201ENST00000298281 RIPK4P57078 832 aa14.38□□□□□ -0.11
PCF11-201ENST00000298281 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.38□□□□□ -0.11
PCF11-201ENST00000298281 RUNDC1Q96C34 613 aa14.38□□□□□ -0.11
PCF11-201ENST00000298281 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms