RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.21
ITGB5-201ENST00000296181 CHMP3Q9Y3E7 222 aa22.64■■□□□ 1.21
ITGB5-201ENST00000296181 RBM10P98175 930 aaKnown RBP22.63■■□□□ 1.21
ITGB5-201ENST00000296181 NRDCO43847 1150 aa22.63■■□□□ 1.21
ITGB5-201ENST00000296181 CDC45O75419 566 aa22.63■■□□□ 1.21
ITGB5-201ENST00000296181 ATF7IPQ6VMQ6 1270 aa22.63■■□□□ 1.21
ITGB5-201ENST00000296181 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.63■■□□□ 1.21
ITGB5-201ENST00000296181 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
ITGB5-201ENST00000296181 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
ITGB5-201ENST00000296181 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
ITGB5-201ENST00000296181 PRPF40AO75400 957 aaKnown RBP22.61■■□□□ 1.21
ITGB5-201ENST00000296181 INTS3Q68E01 1043 aaKnown RBP22.61■■□□□ 1.21
ITGB5-201ENST00000296181 MPNDQ8N594 471 aa22.61■■□□□ 1.21
ITGB5-201ENST00000296181 SCAPERQ9BY12 1400 aa22.6■■□□□ 1.21
ITGB5-201ENST00000296181 C8orf34Q49A92 452 aa22.6■■□□□ 1.21
ITGB5-201ENST00000296181 WDR63Q8IWG1 891 aa22.59■■□□□ 1.21
ITGB5-201ENST00000296181 PRKAR2BP31323 418 aa22.58■■□□□ 1.21
ITGB5-201ENST00000296181 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
ITGB5-201ENST00000296181 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.21
ITGB5-201ENST00000296181 COG3Q96JB2 828 aa22.58■■□□□ 1.21
ITGB5-201ENST00000296181 GRIN2AQ12879 1464 aa22.58■■□□□ 1.21
ITGB5-201ENST00000296181 GNAI1P63096 354 aa22.58■■□□□ 1.2
ITGB5-201ENST00000296181 DHX29Q7Z478 1369 aaKnown RBP22.57■■□□□ 1.2
ITGB5-201ENST00000296181 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
ITGB5-201ENST00000296181 LRPPRCP42704 1394 aaKnown RBP22.56■■□□□ 1.2
ITGB5-201ENST00000296181 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
ITGB5-201ENST00000296181 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
ITGB5-201ENST00000296181 NEK4P51957 841 aa22.55■■□□□ 1.2
ITGB5-201ENST00000296181 AMPHP49418 695 aa22.55■■□□□ 1.2
ITGB5-201ENST00000296181 CHD1LQ86WJ1 897 aa22.54■■□□□ 1.2
ITGB5-201ENST00000296181 K7ELQ4 463 aaPredicted RBP22.53■■□□□ 1.2
ITGB5-201ENST00000296181 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
ITGB5-201ENST00000296181 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.52■■□□□ 1.19
ITGB5-201ENST00000296181 SSH1Q8WYL5 1049 aa22.52■■□□□ 1.19
ITGB5-201ENST00000296181 SEC24BO95487 1268 aa22.51■■□□□ 1.19
ITGB5-201ENST00000296181 CSPP1Q1MSJ5 1256 aa22.51■■□□□ 1.19
ITGB5-201ENST00000296181 PCDHB15Q9Y5E8 787 aa22.51■■□□□ 1.19
ITGB5-201ENST00000296181 NINLQ9Y2I6 1382 aa22.51■■□□□ 1.19
ITGB5-201ENST00000296181 CCDC173Q0VFZ6 552 aa22.5■■□□□ 1.19
ITGB5-201ENST00000296181 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
ITGB5-201ENST00000296181 NGDNQ8NEJ9 315 aaKnown RBP22.5■■□□□ 1.19
ITGB5-201ENST00000296181 PANK2Q9BZ23 570 aa22.5■■□□□ 1.19
ITGB5-201ENST00000296181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
ITGB5-201ENST00000296181 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
ITGB5-201ENST00000296181 PKNOX2Q96KN3 472 aa22.5■■□□□ 1.19
ITGB5-201ENST00000296181 RAPGEF3O95398 923 aa22.5■■□□□ 1.19
ITGB5-201ENST00000296181 HSP90B1P14625 803 aaKnown RBP22.5■■□□□ 1.19
ITGB5-201ENST00000296181 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
ITGB5-201ENST00000296181 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
ITGB5-201ENST00000296181 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
ITGB5-201ENST00000296181 RABEP1Q15276 862 aa22.48■■□□□ 1.19
ITGB5-201ENST00000296181 GCC1Q96CN9 775 aa22.48■■□□□ 1.19
ITGB5-201ENST00000296181 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
ITGB5-201ENST00000296181 TBC1D32Q96NH3 1257 aa22.48■■□□□ 1.19
ITGB5-201ENST00000296181 ATP6V1DQ9Y5K8 247 aa22.48■■□□□ 1.19
ITGB5-201ENST00000296181 VPS37CA5D8V6 355 aaPredicted RBP22.48■■□□□ 1.19
ITGB5-201ENST00000296181 THUMPD2Q9BTF0 503 aaKnown RBP22.47■■□□□ 1.19
ITGB5-201ENST00000296181 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
ITGB5-201ENST00000296181 TPM2P07951 284 aa22.46■■□□□ 1.19
ITGB5-201ENST00000296181 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
ITGB5-201ENST00000296181 ZNF592Q92610 1267 aa22.46■■□□□ 1.19
ITGB5-201ENST00000296181 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
ITGB5-201ENST00000296181 XRCC6P12956 609 aaKnown RBP eCLIP22.45■■□□□ 1.19
ITGB5-201ENST00000296181 ISY1Q9ULR0 285 aaKnown RBP22.45■■□□□ 1.19
ITGB5-201ENST00000296181 CCDC141Q6ZP82 1450 aa22.45■■□□□ 1.18
ITGB5-201ENST00000296181 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
ITGB5-201ENST00000296181 GPATCH3Q96I76 525 aa22.45■■□□□ 1.18
ITGB5-201ENST00000296181 DIAPH3Q9NSV4 1193 aa22.45■■□□□ 1.18
ITGB5-201ENST00000296181 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
ITGB5-201ENST00000296181 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
ITGB5-201ENST00000296181 TNPO1Q92973 898 aaKnown RBP22.44■■□□□ 1.18
ITGB5-201ENST00000296181 PER1O15534 1290 aaPredicted RBP22.44■■□□□ 1.18
ITGB5-201ENST00000296181 NSD3Q9BZ95 1437 aa22.44■■□□□ 1.18
ITGB5-201ENST00000296181 PLEKHH1Q9ULM0 1364 aa22.43■■□□□ 1.18
ITGB5-201ENST00000296181 CIZ1Q9ULV3 898 aaPredicted RBP22.43■■□□□ 1.18
ITGB5-201ENST00000296181 NUP153P49790 1475 aaKnown RBP22.43■■□□□ 1.18
ITGB5-201ENST00000296181 SPINK5Q9NQ38 1064 aaPredicted RBP22.43■■□□□ 1.18
ITGB5-201ENST00000296181 FAM69CQ0P6D2 419 aa22.43■■□□□ 1.18
ITGB5-201ENST00000296181 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
ITGB5-201ENST00000296181 TRIM27P14373 513 aa22.42■■□□□ 1.18
ITGB5-201ENST00000296181 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
ITGB5-201ENST00000296181 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
ITGB5-201ENST00000296181 CCDC39Q9UFE4 941 aa22.42■■□□□ 1.18
ITGB5-201ENST00000296181 SSFA2P28290 1259 aa22.41■■□□□ 1.18
ITGB5-201ENST00000296181 GNL2Q13823 731 aaKnown RBP22.41■■□□□ 1.18
ITGB5-201ENST00000296181 TSPYL4Q9UJ04 414 aa22.41■■□□□ 1.18
ITGB5-201ENST00000296181 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
ITGB5-201ENST00000296181 CT47B1P0C2W7 299 aaPredicted RBP22.41■■□□□ 1.18
ITGB5-201ENST00000296181 RRP9O43818 475 aaKnown RBP22.4■■□□□ 1.18
ITGB5-201ENST00000296181 TESK2Q96S53 571 aa22.39■■□□□ 1.18
ITGB5-201ENST00000296181 MBD3O95983 291 aa22.39■■□□□ 1.17
ITGB5-201ENST00000296181 CABP1Q9NZU7 370 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 BECN2A8MW95 431 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 GOLGA6L19H0YKK7 550 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 H3BQV1 296 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 IFFO2Q5TF58 517 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 ZSCAN30Q86W11 494 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
ITGB5-201ENST00000296181 RLBP1P12271 317 aa22.37■■□□□ 1.17
ITGB5-201ENST00000296181 FIBPO43427 364 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms