RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
C3orf49-201ENST00000295896 MRPL50Q8N5N7 158 aaKnown RBP14.1□□□□□ -0.15
C3orf49-201ENST00000295896 ABL2P42684 1182 aa14.09□□□□□ -0.15
C3orf49-201ENST00000295896 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
C3orf49-201ENST00000295896 NDUFB9Q9Y6M9 179 aa14.09□□□□□ -0.15
C3orf49-201ENST00000295896 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.16
C3orf49-201ENST00000295896 C6orf229H3BNL8 230 aa14.07□□□□□ -0.16
C3orf49-201ENST00000295896 LRCH3Q96II8 777 aa14.06□□□□□ -0.16
C3orf49-201ENST00000295896 HS3ST6Q96QI5 342 aa14.06□□□□□ -0.16
C3orf49-201ENST00000295896 PRR14Q9BWN1 585 aa14.06□□□□□ -0.16
C3orf49-201ENST00000295896 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
C3orf49-201ENST00000295896 CTDSPL2Q05D32 466 aa14.04□□□□□ -0.16
C3orf49-201ENST00000295896 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
C3orf49-201ENST00000295896 ADGRD1Q6QNK2 874 aa14.03□□□□□ -0.16
C3orf49-201ENST00000295896 TSC1Q92574 1164 aa14.03□□□□□ -0.16
C3orf49-201ENST00000295896 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
C3orf49-201ENST00000295896 CFAP99D6REC4 459 aa14.02□□□□□ -0.17
C3orf49-201ENST00000295896 ACTN4O43707 911 aaKnown RBP14.02□□□□□ -0.17
C3orf49-201ENST00000295896 Q3C1V9 767 aa14.01□□□□□ -0.17
C3orf49-201ENST00000295896 MORN1Q5T089 497 aa13.99□□□□□ -0.17
C3orf49-201ENST00000295896 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
C3orf49-201ENST00000295896 FAM163AQ96GL9 167 aaPredicted RBP13.99□□□□□ -0.17
C3orf49-201ENST00000295896 HMX1Q9NP08 348 aaPredicted RBP13.99□□□□□ -0.17
C3orf49-201ENST00000295896 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
C3orf49-201ENST00000295896 ANKK1Q8NFD2 765 aa13.98□□□□□ -0.17
C3orf49-201ENST00000295896 PRR7Q8TB68 274 aa13.98□□□□□ -0.17
C3orf49-201ENST00000295896 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
C3orf49-201ENST00000295896 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
C3orf49-201ENST00000295896 POTEB3A0JP26 581 aa13.97□□□□□ -0.17
C3orf49-201ENST00000295896 HRO43593 1189 aa13.97□□□□□ -0.17
C3orf49-201ENST00000295896 POTEBQ6S5H4 581 aa13.97□□□□□ -0.17
C3orf49-201ENST00000295896 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
C3orf49-201ENST00000295896 LRRN4Q8WUT4 740 aa13.96□□□□□ -0.17
C3orf49-201ENST00000295896 GOLGA8CPA6NN73 597 aa13.95□□□□□ -0.18
C3orf49-201ENST00000295896 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
C3orf49-201ENST00000295896 GLMNQ92990 594 aa13.95□□□□□ -0.18
C3orf49-201ENST00000295896 POM121CA8CG34 1229 aa13.94□□□□□ -0.18
C3orf49-201ENST00000295896 IRF5Q13568 498 aa13.94□□□□□ -0.18
C3orf49-201ENST00000295896 SYMPKQ92797 1274 aaKnown RBP13.94□□□□□ -0.18
C3orf49-201ENST00000295896 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
C3orf49-201ENST00000295896 PUS10Q3MIT2 529 aaKnown RBP13.92□□□□□ -0.18
C3orf49-201ENST00000295896 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
C3orf49-201ENST00000295896 PPP4CP60510 307 aa13.91□□□□□ -0.18
C3orf49-201ENST00000295896 GPR37L1O60883 481 aa13.9□□□□□ -0.18
C3orf49-201ENST00000295896 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
C3orf49-201ENST00000295896 HPS5Q9UPZ3 1129 aa13.9□□□□□ -0.18
C3orf49-201ENST00000295896 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
C3orf49-201ENST00000295896 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
C3orf49-201ENST00000295896 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
C3orf49-201ENST00000295896 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
C3orf49-201ENST00000295896 USB1Q9BQ65 265 aaKnown RBP13.86□□□□□ -0.19
C3orf49-201ENST00000295896 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
C3orf49-201ENST00000295896 NR1I2O75469 434 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
C3orf49-201ENST00000295896 NR6A1Q15406 480 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 LYPD8Q6UX82 237 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 EPS8L1Q8TE68 723 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 WNT2BQ93097 391 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 PCDHB3Q9Y5E6 796 aa13.85□□□□□ -0.19
C3orf49-201ENST00000295896 SOX11P35716 441 aa13.84□□□□□ -0.19
C3orf49-201ENST00000295896 BCAMP50895 628 aa13.84□□□□□ -0.19
C3orf49-201ENST00000295896 APLP1P51693 650 aa13.84□□□□□ -0.19
C3orf49-201ENST00000295896 HDGFL1Q5TGJ6 251 aa13.84□□□□□ -0.19
C3orf49-201ENST00000295896 RNF19BQ6ZMZ0 732 aa13.84□□□□□ -0.19
C3orf49-201ENST00000295896 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.2
C3orf49-201ENST00000295896 VAC14Q08AM6 782 aa13.83□□□□□ -0.2
C3orf49-201ENST00000295896 BRICD5Q6PL45 260 aa13.83□□□□□ -0.2
C3orf49-201ENST00000295896 BLOC1S3Q6QNY0 202 aa13.83□□□□□ -0.2
C3orf49-201ENST00000295896 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
C3orf49-201ENST00000295896 SCUBE3Q8IX30 993 aa13.81□□□□□ -0.2
C3orf49-201ENST00000295896 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
C3orf49-201ENST00000295896 THAP11Q96EK4 314 aa13.79□□□□□ -0.2
C3orf49-201ENST00000295896 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
C3orf49-201ENST00000295896 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
C3orf49-201ENST00000295896 ALG2Q9H553 416 aa13.78□□□□□ -0.2
C3orf49-201ENST00000295896 JUNDP17535 347 aa13.77□□□□□ -0.21
C3orf49-201ENST00000295896 TRAIPQ9BWF2 469 aa13.77□□□□□ -0.21
C3orf49-201ENST00000295896 PTPRNQ16849 979 aa13.76□□□□□ -0.21
C3orf49-201ENST00000295896 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
C3orf49-201ENST00000295896 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
C3orf49-201ENST00000295896 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
C3orf49-201ENST00000295896 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
C3orf49-201ENST00000295896 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
C3orf49-201ENST00000295896 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
C3orf49-201ENST00000295896 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
C3orf49-201ENST00000295896 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
C3orf49-201ENST00000295896 PDE4CQ08493 712 aa13.72□□□□□ -0.21
C3orf49-201ENST00000295896 NR1H3Q13133 447 aa13.72□□□□□ -0.21
C3orf49-201ENST00000295896 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
C3orf49-201ENST00000295896 PPP1R12CQ9BZL4 782 aa13.72□□□□□ -0.21
C3orf49-201ENST00000295896 FKBPLQ9UIM3 349 aa13.72□□□□□ -0.21
C3orf49-201ENST00000295896 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
C3orf49-201ENST00000295896 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
C3orf49-201ENST00000295896 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
C3orf49-201ENST00000295896 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
C3orf49-201ENST00000295896 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
C3orf49-201ENST00000295896 DXOO77932 396 aaKnown RBP13.68□□□□□ -0.22
C3orf49-201ENST00000295896 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
C3orf49-201ENST00000295896 SPSB2Q99619 263 aa13.68□□□□□ -0.22
C3orf49-201ENST00000295896 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms