RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 NSD3Q9BZ95 1437 aa19.06■□□□□ 0.64
CCT3-201ENST00000295688 ZC3H13Q5T200 1668 aaKnown RBP19.06■□□□□ 0.64
CCT3-201ENST00000295688 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
CCT3-201ENST00000295688 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
CCT3-201ENST00000295688 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
CCT3-201ENST00000295688 PUS7Q96PZ0 661 aaKnown RBP19.05■□□□□ 0.64
CCT3-201ENST00000295688 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
CCT3-201ENST00000295688 NOS1P29475 1434 aa19.04■□□□□ 0.64
CCT3-201ENST00000295688 QRICH2Q9H0J4 1663 aa19.04■□□□□ 0.64
CCT3-201ENST00000295688 BECN1Q14457 450 aa19.03■□□□□ 0.64
CCT3-201ENST00000295688 RPGRIP1LQ68CZ1 1315 aa19.03■□□□□ 0.64
CCT3-201ENST00000295688 KIDINS220Q9ULH0 1771 aa19.03■□□□□ 0.64
CCT3-201ENST00000295688 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
CCT3-201ENST00000295688 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
CCT3-201ENST00000295688 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
CCT3-201ENST00000295688 PPLO60437 1756 aa19.02■□□□□ 0.64
CCT3-201ENST00000295688 IQSEC2Q5JU85 1478 aa19.02■□□□□ 0.64
CCT3-201ENST00000295688 RARSP54136 660 aaKnown RBP19.02■□□□□ 0.63
CCT3-201ENST00000295688 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
CCT3-201ENST00000295688 PANK1Q8TE04 598 aa19.01■□□□□ 0.63
CCT3-201ENST00000295688 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
CCT3-201ENST00000295688 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
CCT3-201ENST00000295688 NSD2O96028 1365 aa19■□□□□ 0.63
CCT3-201ENST00000295688 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
CCT3-201ENST00000295688 MYH16Q9H6N6 1097 aa18.99■□□□□ 0.63
CCT3-201ENST00000295688 TRAK1Q9UPV9 953 aa18.99■□□□□ 0.63
CCT3-201ENST00000295688 USP19O94966 1318 aa18.98■□□□□ 0.63
CCT3-201ENST00000295688 UPF2Q9HAU5 1272 aaKnown RBP18.98■□□□□ 0.63
CCT3-201ENST00000295688 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
CCT3-201ENST00000295688 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
CCT3-201ENST00000295688 SLC12A5Q9H2X9 1139 aa18.98■□□□□ 0.63
CCT3-201ENST00000295688 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
CCT3-201ENST00000295688 CT47B1P0C2W7 299 aaPredicted RBP18.96■□□□□ 0.63
CCT3-201ENST00000295688 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
CCT3-201ENST00000295688 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
CCT3-201ENST00000295688 MTHFSP49914 203 aa18.95■□□□□ 0.62
CCT3-201ENST00000295688 CFAP74Q9C0B2 1584 aa18.94■□□□□ 0.62
CCT3-201ENST00000295688 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
CCT3-201ENST00000295688 ASXL2Q76L83 1435 aa18.93■□□□□ 0.62
CCT3-201ENST00000295688 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
CCT3-201ENST00000295688 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
CCT3-201ENST00000295688 NPATQ14207 1427 aa18.93■□□□□ 0.62
CCT3-201ENST00000295688 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
CCT3-201ENST00000295688 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
CCT3-201ENST00000295688 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
CCT3-201ENST00000295688 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
CCT3-201ENST00000295688 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
CCT3-201ENST00000295688 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
CCT3-201ENST00000295688 ADGRB2O60241 1585 aa18.9■□□□□ 0.62
CCT3-201ENST00000295688 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
CCT3-201ENST00000295688 SEC24BO95487 1268 aa18.89■□□□□ 0.62
CCT3-201ENST00000295688 ZKSCAN2Q63HK3 967 aa18.89■□□□□ 0.62
CCT3-201ENST00000295688 GLI2P10070 1586 aa18.89■□□□□ 0.61
CCT3-201ENST00000295688 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
CCT3-201ENST00000295688 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.61
CCT3-201ENST00000295688 RLBP1P12271 317 aa18.88■□□□□ 0.61
CCT3-201ENST00000295688 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
CCT3-201ENST00000295688 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
CCT3-201ENST00000295688 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
CCT3-201ENST00000295688 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
CCT3-201ENST00000295688 U2AF1L5P0DN76 240 aaPredicted RBP18.87■□□□□ 0.61
CCT3-201ENST00000295688 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCT3-201ENST00000295688 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
CCT3-201ENST00000295688 POGZQ7Z3K3 1410 aa18.86■□□□□ 0.61
CCT3-201ENST00000295688 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
CCT3-201ENST00000295688 ABCC3O15438 1527 aa18.85■□□□□ 0.61
CCT3-201ENST00000295688 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
CCT3-201ENST00000295688 FRMPD1Q5SYB0 1578 aa18.85■□□□□ 0.61
CCT3-201ENST00000295688 GGT6Q6P531 493 aa18.85■□□□□ 0.61
CCT3-201ENST00000295688 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
CCT3-201ENST00000295688 CAMSAP1Q5T5Y3 1602 aa18.84■□□□□ 0.61
CCT3-201ENST00000295688 PIK3C2BO00750 1634 aa18.83■□□□□ 0.6
CCT3-201ENST00000295688 IL16Q14005 1332 aa18.83■□□□□ 0.6
CCT3-201ENST00000295688 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCT3-201ENST00000295688 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.6
CCT3-201ENST00000295688 BCL2L13Q9BXK5 485 aa18.83■□□□□ 0.6
CCT3-201ENST00000295688 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
CCT3-201ENST00000295688 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
CCT3-201ENST00000295688 TNNQ9UQP3 1299 aa18.82■□□□□ 0.6
CCT3-201ENST00000295688 HDAC1Q13547 482 aaPredicted RBP18.81■□□□□ 0.6
CCT3-201ENST00000295688 DDX19BQ9UMR2 479 aa18.81■□□□□ 0.6
CCT3-201ENST00000295688 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
CCT3-201ENST00000295688 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
CCT3-201ENST00000295688 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
CCT3-201ENST00000295688 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
CCT3-201ENST00000295688 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
CCT3-201ENST00000295688 MED14O60244 1454 aa18.79■□□□□ 0.6
CCT3-201ENST00000295688 L1TD1Q5T7N2 865 aaKnown RBP18.79■□□□□ 0.6
CCT3-201ENST00000295688 ANKRD26Q9UPS8 1709 aa18.78■□□□□ 0.6
CCT3-201ENST00000295688 TMPOP42166 694 aaKnown RBP18.78■□□□□ 0.6
CCT3-201ENST00000295688 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
CCT3-201ENST00000295688 SLKQ9H2G2 1235 aaPredicted RBP18.78■□□□□ 0.6
CCT3-201ENST00000295688 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
CCT3-201ENST00000295688 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
CCT3-201ENST00000295688 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
CCT3-201ENST00000295688 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
CCT3-201ENST00000295688 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
CCT3-201ENST00000295688 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
CCT3-201ENST00000295688 SIGLEC1Q9BZZ2 1709 aa18.76■□□□□ 0.59
CCT3-201ENST00000295688 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms