RNA–Protein interactions for RNA: ENST00000293760.9

LEMD2-201, Transcript of LEM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD2, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-201ENST00000293760 MFAP1P55081 439 aaKnown RBP24.3■■□□□ 1.48
LEMD2-201ENST00000293760 FTSJ3Q8IY81 847 aaKnown RBP24.3■■□□□ 1.48
LEMD2-201ENST00000293760 ABCC1P33527 1531 aa24.29■■□□□ 1.48
LEMD2-201ENST00000293760 VIRMAQ69YN4 1812 aaKnown RBP24.29■■□□□ 1.48
LEMD2-201ENST00000293760 PTPRTO14522 1441 aa24.28■■□□□ 1.48
LEMD2-201ENST00000293760 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
LEMD2-201ENST00000293760 TBC1D32Q96NH3 1257 aa24.27■■□□□ 1.48
LEMD2-201ENST00000293760 CHD1O14646 1710 aa24.27■■□□□ 1.48
LEMD2-201ENST00000293760 POLR3AO14802 1390 aaPredicted RBP24.27■■□□□ 1.48
LEMD2-201ENST00000293760 STK26Q9P289 416 aa24.27■■□□□ 1.48
LEMD2-201ENST00000293760 ANTXR1Q9H6X2 564 aa24.26■■□□□ 1.47
LEMD2-201ENST00000293760 CABP2Q9NPB3 220 aa24.26■■□□□ 1.47
LEMD2-201ENST00000293760 RWDD1Q9H446 243 aaPredicted RBP24.25■■□□□ 1.47
LEMD2-201ENST00000293760 STAC3Q96MF2 364 aa24.25■■□□□ 1.47
LEMD2-201ENST00000293760 FAM43AQ8N2R8 423 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 NOS1P29475 1434 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 NINLQ9Y2I6 1382 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 NGEFQ8N5V2 710 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 SMC4Q9NTJ3 1288 aa24.24■■□□□ 1.47
LEMD2-201ENST00000293760 ITPRIPQ8IWB1 547 aa24.23■■□□□ 1.47
LEMD2-201ENST00000293760 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
LEMD2-201ENST00000293760 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
LEMD2-201ENST00000293760 RRAGDQ9NQL2 400 aaPredicted RBP24.21■■□□□ 1.47
LEMD2-201ENST00000293760 EXOSC9Q06265 439 aaKnown RBP24.21■■□□□ 1.47
LEMD2-201ENST00000293760 ZFYVE16Q7Z3T8 1539 aa24.2■■□□□ 1.47
LEMD2-201ENST00000293760 MVPQ14764 893 aaKnown RBP24.18■■□□□ 1.46
LEMD2-201ENST00000293760 ZCCHC11Q5TAX3 1644 aaKnown RBP24.18■■□□□ 1.46
LEMD2-201ENST00000293760 DZIP1LQ8IYY4 767 aaKnown RBP24.18■■□□□ 1.46
LEMD2-201ENST00000293760 MAP3K4Q9Y6R4 1608 aa24.18■■□□□ 1.46
LEMD2-201ENST00000293760 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
LEMD2-201ENST00000293760 ZKSCAN2Q63HK3 967 aa24.17■■□□□ 1.46
LEMD2-201ENST00000293760 PANK2Q9BZ23 570 aa24.17■■□□□ 1.46
LEMD2-201ENST00000293760 TET3O43151 1660 aa24.16■■□□□ 1.46
LEMD2-201ENST00000293760 C22orf23Q9BZE7 217 aa24.16■■□□□ 1.46
LEMD2-201ENST00000293760 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
LEMD2-201ENST00000293760 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
LEMD2-201ENST00000293760 FBLN1P23142 703 aa24.15■■□□□ 1.46
LEMD2-201ENST00000293760 SHPRHQ149N8 1683 aa24.15■■□□□ 1.46
LEMD2-201ENST00000293760 L1TD1Q5T7N2 865 aaKnown RBP24.15■■□□□ 1.46
LEMD2-201ENST00000293760 SHROOM2Q13796 1616 aa24.14■■□□□ 1.46
LEMD2-201ENST00000293760 SRPK2P78362 688 aaKnown RBP24.14■■□□□ 1.45
LEMD2-201ENST00000293760 SSH1Q8WYL5 1049 aa24.14■■□□□ 1.45
LEMD2-201ENST00000293760 FOXD4L1Q9NU39 408 aa24.14■■□□□ 1.45
LEMD2-201ENST00000293760 TRIM27P14373 513 aa24.13■■□□□ 1.45
LEMD2-201ENST00000293760 MCM4P33991 863 aa24.13■■□□□ 1.45
LEMD2-201ENST00000293760 FANCAO15360 1455 aa24.13■■□□□ 1.45
LEMD2-201ENST00000293760 PHF23Q9BUL5 403 aaPredicted RBP24.12■■□□□ 1.45
LEMD2-201ENST00000293760 GOLGA6L3A6NEY3 463 aa24.12■■□□□ 1.45
LEMD2-201ENST00000293760 XRCC6P12956 609 aaKnown RBP eCLIP24.12■■□□□ 1.45
LEMD2-201ENST00000293760 NOB1Q9ULX3 412 aaKnown RBP24.12■■□□□ 1.45
LEMD2-201ENST00000293760 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
LEMD2-201ENST00000293760 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
LEMD2-201ENST00000293760 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
LEMD2-201ENST00000293760 LNPKQ9C0E8 428 aa24.1■■□□□ 1.45
LEMD2-201ENST00000293760 KIAA1210Q9ULL0 1709 aa24.1■■□□□ 1.45
LEMD2-201ENST00000293760 RSPH6AQ9H0K4 717 aa24.09■■□□□ 1.45
LEMD2-201ENST00000293760 MROH2AA6NES4 1674 aa24.09■■□□□ 1.45
LEMD2-201ENST00000293760 ELL2O00472 640 aaPredicted RBP24.08■■□□□ 1.45
LEMD2-201ENST00000293760 TMEM57Q8N5G2 664 aa24.08■■□□□ 1.45
LEMD2-201ENST00000293760 MYOM2P54296 1465 aa24.08■■□□□ 1.45
LEMD2-201ENST00000293760 ADGRL1O94910 1474 aa24.08■■□□□ 1.44
LEMD2-201ENST00000293760 KIF1BO60333 1816 aa24.08■■□□□ 1.44
LEMD2-201ENST00000293760 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
LEMD2-201ENST00000293760 C1orf115Q9H7X2 142 aa24.07■■□□□ 1.44
LEMD2-201ENST00000293760 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
LEMD2-201ENST00000293760 MINK1Q8N4C8 1332 aaPredicted RBP24.06■■□□□ 1.44
LEMD2-201ENST00000293760 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
LEMD2-201ENST00000293760 TRAK2O60296 914 aa24.06■■□□□ 1.44
LEMD2-201ENST00000293760 RIPK4P57078 832 aa24.06■■□□□ 1.44
LEMD2-201ENST00000293760 AAMPQ13685 434 aa24.05■■□□□ 1.44
LEMD2-201ENST00000293760 CHMP5Q9NZZ3 219 aa24.05■■□□□ 1.44
LEMD2-201ENST00000293760 TMPOP42166 694 aaKnown RBP24.05■■□□□ 1.44
LEMD2-201ENST00000293760 HSCBQ8IWL3 235 aa24.04■■□□□ 1.44
LEMD2-201ENST00000293760 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
LEMD2-201ENST00000293760 THUMPD2Q9BTF0 503 aaKnown RBP24.03■■□□□ 1.44
LEMD2-201ENST00000293760 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
LEMD2-201ENST00000293760 ATF7IPQ6VMQ6 1270 aa24.02■■□□□ 1.44
LEMD2-201ENST00000293760 TRIM35Q9UPQ4 493 aa24.02■■□□□ 1.44
LEMD2-201ENST00000293760 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.43
LEMD2-201ENST00000293760 QRICH2Q9H0J4 1663 aa24■■□□□ 1.43
LEMD2-201ENST00000293760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24■■□□□ 1.435e-8■□□□□ 9.9
LEMD2-201ENST00000293760 NAP1L5Q96NT1 182 aaPredicted RBP24■■□□□ 1.43
LEMD2-201ENST00000293760 DDX19BQ9UMR2 479 aa24■■□□□ 1.43
LEMD2-201ENST00000293760 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
LEMD2-201ENST00000293760 MROH1Q8NDA8 1641 aa23.98■■□□□ 1.43
LEMD2-201ENST00000293760 HMOX1P09601 288 aa23.97■■□□□ 1.43
LEMD2-201ENST00000293760 HSP90AA1P07900 732 aaKnown RBP23.97■■□□□ 1.43
LEMD2-201ENST00000293760 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
LEMD2-201ENST00000293760 FSD2A1L4K1 749 aa23.96■■□□□ 1.43
LEMD2-201ENST00000293760 EFCAB6Q5THR3 1501 aa23.96■■□□□ 1.43
LEMD2-201ENST00000293760 ANKRD45Q5TZF3 282 aa23.96■■□□□ 1.43
LEMD2-201ENST00000293760 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
LEMD2-201ENST00000293760 CD109Q6YHK3 1445 aa23.95■■□□□ 1.43
LEMD2-201ENST00000293760 HDAC1Q13547 482 aaPredicted RBP23.95■■□□□ 1.43
LEMD2-201ENST00000293760 RAPGEF3O95398 923 aa23.94■■□□□ 1.42
LEMD2-201ENST00000293760 MYO3AQ8NEV4 1616 aa23.94■■□□□ 1.42
LEMD2-201ENST00000293760 IFT172Q9UG01 1749 aa23.94■■□□□ 1.42
LEMD2-201ENST00000293760 HSP90AB1P08238 724 aaKnown RBP23.94■■□□□ 1.42
LEMD2-201ENST00000293760 NPATQ14207 1427 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms