RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 ARAP1Q96P48 1450 aa17.96■□□□□ 0.47
KCNMA1-202ENST00000286628 RAD21O60216 631 aa17.96■□□□□ 0.47
KCNMA1-202ENST00000286628 TPM1P09493 284 aa17.96■□□□□ 0.47
KCNMA1-202ENST00000286628 NEUROD6Q96NK8 337 aa17.95■□□□□ 0.46
KCNMA1-202ENST00000286628 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
KCNMA1-202ENST00000286628 GOLGA6L1Q8N7Z2 621 aa17.95■□□□□ 0.46
KCNMA1-202ENST00000286628 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
KCNMA1-202ENST00000286628 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 GNAI3P08754 354 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 TPM2P07951 284 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 GSE1Q14687 1217 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 ERICH2A1L162 156 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 SMC3Q9UQE7 1217 aa17.94■□□□□ 0.46
KCNMA1-202ENST00000286628 PDE4CQ08493 712 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 SLC52A1Q9NWF4 448 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 ESCO1Q5FWF5 840 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 NUCB2P80303 420 aa17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 CTDP1Q9Y5B0 961 aaPredicted RBP17.93■□□□□ 0.46
KCNMA1-202ENST00000286628 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 BICD2Q8TD16 824 aa17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 CCDC47Q96A33 483 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 C22orf23Q9BZE7 217 aa17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 VPS37CA5D8V6 355 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 RBM33Q96EV2 1170 aaKnown RBP17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
KCNMA1-202ENST00000286628 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
KCNMA1-202ENST00000286628 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
KCNMA1-202ENST00000286628 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
KCNMA1-202ENST00000286628 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
KCNMA1-202ENST00000286628 CDC45O75419 566 aa17.9■□□□□ 0.46
KCNMA1-202ENST00000286628 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
KCNMA1-202ENST00000286628 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
KCNMA1-202ENST00000286628 KIAA1107Q9UPP5 1409 aa17.9■□□□□ 0.46
KCNMA1-202ENST00000286628 FBXW7Q969H0 707 aa17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 HOOK1Q9UJC3 728 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 ANKRD20A12PQ8NF67 263 aa17.89■□□□□ 0.45
KCNMA1-202ENST00000286628 SURF6O75683 361 aaKnown RBP17.88■□□□□ 0.45
KCNMA1-202ENST00000286628 SAFBQ15424 915 aaKnown RBP eCLIP17.88■□□□□ 0.45
KCNMA1-202ENST00000286628 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
KCNMA1-202ENST00000286628 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
KCNMA1-202ENST00000286628 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
KCNMA1-202ENST00000286628 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-202ENST00000286628 IPO7O95373 1038 aaKnown RBP17.86■□□□□ 0.45
KCNMA1-202ENST00000286628 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
KCNMA1-202ENST00000286628 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
KCNMA1-202ENST00000286628 CABP1Q9NZU7 370 aa17.86■□□□□ 0.45
KCNMA1-202ENST00000286628 NESP48681 1621 aa17.85■□□□□ 0.45
KCNMA1-202ENST00000286628 NINLQ9Y2I6 1382 aa17.85■□□□□ 0.45
KCNMA1-202ENST00000286628 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
KCNMA1-202ENST00000286628 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-202ENST00000286628 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 EHBP1L1Q8N3D4 1523 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 PDE3AQ14432 1141 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 CCDC73Q6ZRK6 1079 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 TATP17735 454 aaPredicted RBP17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 CCAR2Q8N163 923 aaKnown RBP17.84■□□□□ 0.45
KCNMA1-202ENST00000286628 PSMA5P28066 241 aa17.83■□□□□ 0.45
KCNMA1-202ENST00000286628 CCDC27Q2M243 656 aa17.83■□□□□ 0.45
KCNMA1-202ENST00000286628 PCMTD1Q96MG8 357 aaPredicted RBP17.83■□□□□ 0.45
KCNMA1-202ENST00000286628 SMG6Q86US8 1419 aaKnown RBP17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 PRM3Q9NNZ6 103 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 TBC1D2BQ9UPU7 963 aa17.82■□□□□ 0.44
KCNMA1-202ENST00000286628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.81■□□□□ 0.44
KCNMA1-202ENST00000286628 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
KCNMA1-202ENST00000286628 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
KCNMA1-202ENST00000286628 GNAI2P04899 355 aa17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 STRN4Q9NRL3 753 aa17.8■□□□□ 0.44
KCNMA1-202ENST00000286628 PNISRQ8TF01 805 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 FYB1O15117 783 aa17.79■□□□□ 0.44
KCNMA1-202ENST00000286628 FOSBP53539 338 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms