RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-201ENST00000285124 IFT172Q9UG01 1749 aa13.28□□□□□ -0.28
PPP4R1-201ENST00000285124 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
PPP4R1-201ENST00000285124 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-201ENST00000285124 ABCC11Q96J66 1382 aa13.27□□□□□ -0.28
PPP4R1-201ENST00000285124 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
PPP4R1-201ENST00000285124 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-201ENST00000285124 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-201ENST00000285124 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
PPP4R1-201ENST00000285124 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
PPP4R1-201ENST00000285124 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-201ENST00000285124 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
PPP4R1-201ENST00000285124 ADAMTSL3P82987 1691 aa13.25□□□□□ -0.29
PPP4R1-201ENST00000285124 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 RALBP1Q15311 655 aa13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
PPP4R1-201ENST00000285124 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
PPP4R1-201ENST00000285124 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-201ENST00000285124 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-201ENST00000285124 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-201ENST00000285124 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-201ENST00000285124 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
PPP4R1-201ENST00000285124 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
PPP4R1-201ENST00000285124 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
PPP4R1-201ENST00000285124 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
PPP4R1-201ENST00000285124 PPP2R1AP30153 589 aa13.21□□□□□ -0.29
PPP4R1-201ENST00000285124 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.29
PPP4R1-201ENST00000285124 NLRP13Q86W25 1043 aa13.21□□□□□ -0.3
PPP4R1-201ENST00000285124 KIAA1210Q9ULL0 1709 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 LAMC1P11047 1609 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 NME9Q86XW9 330 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
PPP4R1-201ENST00000285124 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
PPP4R1-201ENST00000285124 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 FYB1O15117 783 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 ACEP12821 1306 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 SLIT1O75093 1534 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 MTHFSP49914 203 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 CCDC146Q8IYE0 955 aa13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-201ENST00000285124 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
PPP4R1-201ENST00000285124 FOXO3O43524 673 aa13.16□□□□□ -0.3
PPP4R1-201ENST00000285124 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
PPP4R1-201ENST00000285124 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPP4R1-201ENST00000285124 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-201ENST00000285124 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
PPP4R1-201ENST00000285124 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-201ENST00000285124 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
PPP4R1-201ENST00000285124 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-201ENST00000285124 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
PPP4R1-201ENST00000285124 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.31
PPP4R1-201ENST00000285124 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
PPP4R1-201ENST00000285124 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-201ENST00000285124 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
PPP4R1-201ENST00000285124 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-201ENST00000285124 KDM5AP29375 1690 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-201ENST00000285124 MED14O60244 1454 aa13.13□□□□□ -0.31
PPP4R1-201ENST00000285124 PSME1Q06323 249 aa13.12□□□□□ -0.31
PPP4R1-201ENST00000285124 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
PPP4R1-201ENST00000285124 ATF3P18847 181 aa13.12□□□□□ -0.31
PPP4R1-201ENST00000285124 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
PPP4R1-201ENST00000285124 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-201ENST00000285124 COG3Q96JB2 828 aa13.11□□□□□ -0.31
PPP4R1-201ENST00000285124 NLRP6P59044 892 aa13.1□□□□□ -0.31
PPP4R1-201ENST00000285124 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
PPP4R1-201ENST00000285124 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
PPP4R1-201ENST00000285124 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-201ENST00000285124 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 TECPR2O15040 1411 aa13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
PPP4R1-201ENST00000285124 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
PPP4R1-201ENST00000285124 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
PPP4R1-201ENST00000285124 DLC1Q96QB1 1528 aa13.07□□□□□ -0.32
PPP4R1-201ENST00000285124 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
PPP4R1-201ENST00000285124 SETD1AO15047 1707 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-201ENST00000285124 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 APAF1O14727 1248 aa13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms