RNA–Protein interactions for RNA: ENST00000271277.10

CTTNBP2NL-201, Transcript of CTTNBP2 N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2NL, Length 5,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-201ENST00000271277 NFAT5O94916 1531 aa9.06□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 PKD1L3Q7Z443 1732 aa9.06□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 LMTK3Q96Q04 1460 aa9.06□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 GOLGB1Q14789 3259 aaKnown RBP9.05□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 PLEKHH1Q9ULM0 1364 aa9.05□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 CICQ96RK0 1608 aaPredicted RBP9.04□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 UTRNP46939 3433 aa9.04□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 C5P01031 1676 aa9.03□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 KIF1AQ12756 1690 aa9.03□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 A0A1B0GUL6 1792 aa9.02□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 CDK12Q9NYV4 1490 aaPredicted RBP9.01□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 BRD4O60885 1362 aaPredicted RBP9.01□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 TOGARAM1Q9Y4F4 1720 aa9.01□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 KANK1Q14678 1352 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 ZBED9Q6R2W3 1325 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 SCN11AQ9UI33 1791 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 SLC4A1APQ9BWU0 796 aaKnown RBP9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 CACNA1FO60840 1977 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 APLP2Q06481 763 aa9□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 C14orf93Q9H972 538 aaKnown RBP8.99□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 RREB1Q92766 1687 aa8.98□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 ROCK2O75116 1388 aaKnown RBP8.98□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 SLIT3O75094 1523 aa8.97□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 WASHC2CQ9Y4E1 1318 aa8.97□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 EFCAB2Q5VUJ9 269 aa8.96□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 OSCARQ8IYS5 282 aa8.96□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 DMRT2Q9Y5R5 561 aa8.96□□□□□ -0.97
CTTNBP2NL-201ENST00000271277 TJP1Q07157 1748 aa8.96□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PLCH1Q4KWH8 1693 aa8.96□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 ABCC6O95255 1503 aa8.96□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 FAM135BQ49AJ0 1406 aa8.95□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PPIP5K1Q6PFW1 1433 aa8.95□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PTCH1Q13635 1447 aa8.95□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 METP08581 1390 aa8.94□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 SPAG9O60271 1321 aaKnown RBP8.94□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 RGS12O14924 1447 aa8.94□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 FBLN2P98095 1184 aa8.93□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PUS7Q96PZ0 661 aaKnown RBP8.93□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 PLEKHF1Q96S99 279 aa8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 ZNF646O15015 1829 aaPredicted RBP8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 LAMB4A4D0S4 1761 aa8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 NRAPQ86VF7 1730 aa8.9□□□□□ -0.98
CTTNBP2NL-201ENST00000271277 MSH5O43196 834 aa8.89□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 A0A1W2PP64 1363 aa8.89□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 COL16A1Q07092 1604 aaPredicted RBP8.89□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 ROBO1Q9Y6N7 1651 aa8.87□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 IDI1Q13907 227 aa8.86□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 ROBO2Q9HCK4 1378 aa8.85□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 ZNF831Q5JPB2 1677 aa8.85□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 NCBP3Q53F19 620 aaKnown RBP8.84□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 RPGRIP1LQ68CZ1 1315 aa8.84□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
CTTNBP2NL-201ENST00000271277 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
CTTNBP2NL-201ENST00000271277 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
CTTNBP2NL-201ENST00000271277 ITGB4P16144 1822 aa8.82□□□□□ -1
CTTNBP2NL-201ENST00000271277 PLEKHG1Q9ULL1 1385 aa8.82□□□□□ -1
CTTNBP2NL-201ENST00000271277 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
CTTNBP2NL-201ENST00000271277 PCNTO95613 3336 aa8.82□□□□□ -1
CTTNBP2NL-201ENST00000271277 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
CTTNBP2NL-201ENST00000271277 ZMYM3Q14202 1370 aa8.81□□□□□ -1
CTTNBP2NL-201ENST00000271277 ZNF777Q9ULD5 760 aaPredicted RBP8.81□□□□□ -1
CTTNBP2NL-201ENST00000271277 MRC1P22897 1456 aa8.81□□□□□ -1
CTTNBP2NL-201ENST00000271277 PIK3R4Q99570 1358 aa8.81□□□□□ -1
CTTNBP2NL-201ENST00000271277 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
CTTNBP2NL-201ENST00000271277 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 COL5A3P25940 1745 aaPredicted RBP8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 USP19O94966 1318 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 TMEM2Q9UHN6 1383 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 TSPY4P0CV99 314 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 TSPY10P0CW01 314 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 PPP2R1AP30153 589 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 ANKRD36CQ5JPF3 1778 aa8.8□□□□□ -1
CTTNBP2NL-201ENST00000271277 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
CTTNBP2NL-201ENST00000271277 SIRT1Q96EB6 747 aa8.79□□□□□ -1
CTTNBP2NL-201ENST00000271277 NSD3Q9BZ95 1437 aa8.78□□□□□ -1
CTTNBP2NL-201ENST00000271277 AATKQ6ZMQ8 1374 aa8.78□□□□□ -1
CTTNBP2NL-201ENST00000271277 MYH15Q9Y2K3 1946 aa8.78□□□□□ -1
CTTNBP2NL-201ENST00000271277 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
CTTNBP2NL-201ENST00000271277 LAMA4Q16363 1823 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms