RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 API5Q9BZZ5 524 aaKnown RBP15.9■□□□□ 0.14
PRDM16-201ENST00000270722 TXLNAP40222 546 aa15.9■□□□□ 0.14
PRDM16-201ENST00000270722 GOLGA6L10A0A0M3HER8 536 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 SYCP1Q15431 976 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 TMEM132AQ24JP5 1023 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.13
PRDM16-201ENST00000270722 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
PRDM16-201ENST00000270722 RILPL2Q969X0 211 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
PRDM16-201ENST00000270722 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 SPATA24Q86W54 205 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 GNL3LQ9NVN8 582 aaKnown RBP15.88■□□□□ 0.13
PRDM16-201ENST00000270722 ZFYVE27Q5T4F4 411 aa15.88■□□□□ 0.13
PRDM16-201ENST00000270722 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
PRDM16-201ENST00000270722 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
PRDM16-201ENST00000270722 CCDC73Q6ZRK6 1079 aa15.87■□□□□ 0.13
PRDM16-201ENST00000270722 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
PRDM16-201ENST00000270722 E9PSI1 815 aa15.87■□□□□ 0.13
PRDM16-201ENST00000270722 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
PRDM16-201ENST00000270722 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
PRDM16-201ENST00000270722 IKQ13123 557 aaPredicted RBP15.86■□□□□ 0.13
PRDM16-201ENST00000270722 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
PRDM16-201ENST00000270722 NAP1L1P55209 391 aaKnown RBP15.85■□□□□ 0.13
PRDM16-201ENST00000270722 CTR9Q6PD62 1173 aa15.85■□□□□ 0.13
PRDM16-201ENST00000270722 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
PRDM16-201ENST00000270722 OLFM4Q6UX06 510 aa15.85■□□□□ 0.13
PRDM16-201ENST00000270722 MPHOSPH9Q99550 1183 aa15.85■□□□□ 0.13
PRDM16-201ENST00000270722 HOMER1Q86YM7 354 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 SUDS3Q9H7L9 328 aaPredicted RBP15.84■□□□□ 0.13
PRDM16-201ENST00000270722 ERLIN2O94905 339 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
PRDM16-201ENST00000270722 SOGA1O94964 1423 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 SIN3AQ96ST3 1273 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 NINLQ9Y2I6 1382 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
PRDM16-201ENST00000270722 PSMA5P28066 241 aa15.83■□□□□ 0.12
PRDM16-201ENST00000270722 CCP110O43303 1012 aa15.83■□□□□ 0.12
PRDM16-201ENST00000270722 HIP1O00291 1037 aa15.83■□□□□ 0.12
PRDM16-201ENST00000270722 CENPQQ7L2Z9 268 aaPredicted RBP15.83■□□□□ 0.12
PRDM16-201ENST00000270722 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
PRDM16-201ENST00000270722 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
PRDM16-201ENST00000270722 PDCP20941 246 aa15.82■□□□□ 0.12
PRDM16-201ENST00000270722 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
PRDM16-201ENST00000270722 CPSF2Q9P2I0 782 aaKnown RBP15.82■□□□□ 0.12
PRDM16-201ENST00000270722 GPRASP1Q5JY77 1395 aa15.82■□□□□ 0.12
PRDM16-201ENST00000270722 AEBP1Q8IUX7 1158 aa15.82■□□□□ 0.12
PRDM16-201ENST00000270722 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
PRDM16-201ENST00000270722 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
PRDM16-201ENST00000270722 BICD2Q8TD16 824 aa15.81■□□□□ 0.12
PRDM16-201ENST00000270722 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
PRDM16-201ENST00000270722 DDX49Q9Y6V7 483 aaKnown RBP15.81■□□□□ 0.12
PRDM16-201ENST00000270722 LIG1P18858 919 aa15.8■□□□□ 0.12
PRDM16-201ENST00000270722 WDR66Q8TBY9 1149 aa15.8■□□□□ 0.12
PRDM16-201ENST00000270722 MRVI1Q9Y6F6 885 aa15.8■□□□□ 0.12
PRDM16-201ENST00000270722 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
PRDM16-201ENST00000270722 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 MPHOSPH10O00566 681 aaKnown RBP15.79■□□□□ 0.12
PRDM16-201ENST00000270722 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 KIAA1328Q86T90 577 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 JMYQ8N9B5 988 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
PRDM16-201ENST00000270722 NOL8Q76FK4 1167 aaKnown RBP15.78■□□□□ 0.12
PRDM16-201ENST00000270722 ANO2Q9NQ90 1003 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 FBXO3Q9UK99 471 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.12
PRDM16-201ENST00000270722 NUCB2P80303 420 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 POLR3GO15318 223 aaPredicted RBP15.78■□□□□ 0.12
PRDM16-201ENST00000270722 GTF2A1P52655 376 aaPredicted RBP15.78■□□□□ 0.12
PRDM16-201ENST00000270722 GPATCH11Q8N954 259 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
PRDM16-201ENST00000270722 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
PRDM16-201ENST00000270722 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
PRDM16-201ENST00000270722 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRDM16-201ENST00000270722 EIF3JO75822 258 aaKnown RBP15.77■□□□□ 0.11
PRDM16-201ENST00000270722 STIM1Q13586 685 aa15.77■□□□□ 0.11
PRDM16-201ENST00000270722 GNAI1P63096 354 aa15.77■□□□□ 0.11
PRDM16-201ENST00000270722 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.11
PRDM16-201ENST00000270722 INTS3Q68E01 1043 aaKnown RBP15.76■□□□□ 0.11
PRDM16-201ENST00000270722 FAM114A1Q8IWE2 563 aa15.76■□□□□ 0.11
PRDM16-201ENST00000270722 CFAP57Q96MR6 1250 aa15.76■□□□□ 0.11
PRDM16-201ENST00000270722 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
PRDM16-201ENST00000270722 MAGEC2Q9UBF1 373 aaPredicted RBP15.76■□□□□ 0.11
PRDM16-201ENST00000270722 SEPT6Q14141 434 aa15.76■□□□□ 0.11
PRDM16-201ENST00000270722 SEPT14Q6ZU15 432 aa15.76■□□□□ 0.11
PRDM16-201ENST00000270722 TDO2P48775 406 aa15.75■□□□□ 0.11
PRDM16-201ENST00000270722 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
PRDM16-201ENST00000270722 FEZ1Q99689 392 aa15.75■□□□□ 0.11
PRDM16-201ENST00000270722 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
PRDM16-201ENST00000270722 DIAPH1O60610 1272 aaKnown RBP15.75■□□□□ 0.11
PRDM16-201ENST00000270722 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
PRDM16-201ENST00000270722 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
PRDM16-201ENST00000270722 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRDM16-201ENST00000270722 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms