RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 C1orf167Q5SNV9 1468 aa12.13□□□□□ -0.47
ERCC8-201ENST00000265038 DLC1Q96QB1 1528 aa12.12□□□□□ -0.47
ERCC8-201ENST00000265038 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
ERCC8-201ENST00000265038 ORAI2Q96SN7 254 aa12.12□□□□□ -0.47
ERCC8-201ENST00000265038 NALCNQ8IZF0 1738 aa12.12□□□□□ -0.47
ERCC8-201ENST00000265038 ROBO1Q9Y6N7 1651 aa12.12□□□□□ -0.47
ERCC8-201ENST00000265038 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
ERCC8-201ENST00000265038 TONSLQ96HA7 1378 aa12.1□□□□□ -0.47
ERCC8-201ENST00000265038 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
ERCC8-201ENST00000265038 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
ERCC8-201ENST00000265038 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
ERCC8-201ENST00000265038 ESCO1Q5FWF5 840 aa12.08□□□□□ -0.48
ERCC8-201ENST00000265038 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-201ENST00000265038 CDC42BPGQ6DT37 1551 aa12.08□□□□□ -0.48
ERCC8-201ENST00000265038 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
ERCC8-201ENST00000265038 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
ERCC8-201ENST00000265038 WASLO00401 505 aaPredicted RBP12.06□□□□□ -0.48
ERCC8-201ENST00000265038 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
ERCC8-201ENST00000265038 KIAA1210Q9ULL0 1709 aa12.05□□□□□ -0.48
ERCC8-201ENST00000265038 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
ERCC8-201ENST00000265038 JCADQ9P266 1359 aa12.04□□□□□ -0.48
ERCC8-201ENST00000265038 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
ERCC8-201ENST00000265038 FOXO3O43524 673 aa12.04□□□□□ -0.48
ERCC8-201ENST00000265038 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
ERCC8-201ENST00000265038 COL16A1Q07092 1604 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-201ENST00000265038 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
ERCC8-201ENST00000265038 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
ERCC8-201ENST00000265038 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
ERCC8-201ENST00000265038 LRRC59Q96AG4 307 aaKnown RBP12.03□□□□□ -0.48
ERCC8-201ENST00000265038 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
ERCC8-201ENST00000265038 PHLPP1O60346 1717 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 CARD11Q9BXL7 1154 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 ADGRB2O60241 1585 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.49
ERCC8-201ENST00000265038 TRPM1Q7Z4N2 1603 aa12.01□□□□□ -0.49
ERCC8-201ENST00000265038 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
ERCC8-201ENST00000265038 PMFBP1Q8TBY8 1022 aa12.01□□□□□ -0.49
ERCC8-201ENST00000265038 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
ERCC8-201ENST00000265038 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
ERCC8-201ENST00000265038 NUDT16Q96DE0 195 aaKnown RBP12□□□□□ -0.49
ERCC8-201ENST00000265038 MED1Q15648 1581 aaPredicted RBP12□□□□□ -0.49
ERCC8-201ENST00000265038 SPATA31A6Q5VVP1 1343 aa12□□□□□ -0.49
ERCC8-201ENST00000265038 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
ERCC8-201ENST00000265038 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
ERCC8-201ENST00000265038 PNPLA6Q8IY17 1366 aa11.99□□□□□ -0.49
ERCC8-201ENST00000265038 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
ERCC8-201ENST00000265038 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
ERCC8-201ENST00000265038 PXDNQ92626 1479 aa11.98□□□□□ -0.49
ERCC8-201ENST00000265038 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
ERCC8-201ENST00000265038 NUTM2BA6NNL0 878 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-201ENST00000265038 NUTM2EB1AL46 878 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-201ENST00000265038 NUTM2AQ8IVF1 878 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-201ENST00000265038 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
ERCC8-201ENST00000265038 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
ERCC8-201ENST00000265038 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
ERCC8-201ENST00000265038 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
ERCC8-201ENST00000265038 PSME1Q06323 249 aa11.96□□□□□ -0.49
ERCC8-201ENST00000265038 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
ERCC8-201ENST00000265038 ATP7BP35670 1465 aa11.96□□□□□ -0.49
ERCC8-201ENST00000265038 LRP6O75581 1613 aa11.96□□□□□ -0.49
ERCC8-201ENST00000265038 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.49
ERCC8-201ENST00000265038 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
ERCC8-201ENST00000265038 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
ERCC8-201ENST00000265038 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
ERCC8-201ENST00000265038 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
ERCC8-201ENST00000265038 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
ERCC8-201ENST00000265038 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
ERCC8-201ENST00000265038 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
ERCC8-201ENST00000265038 KIF1AQ12756 1690 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 SHPRHQ149N8 1683 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 ACEP12821 1306 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 TESK2Q96S53 571 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
ERCC8-201ENST00000265038 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
ERCC8-201ENST00000265038 TNS3Q68CZ2 1445 aa11.91□□□□□ -0.5
ERCC8-201ENST00000265038 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
ERCC8-201ENST00000265038 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-201ENST00000265038 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
ERCC8-201ENST00000265038 QRICH2Q9H0J4 1663 aa11.9□□□□□ -0.5
ERCC8-201ENST00000265038 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
ERCC8-201ENST00000265038 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
ERCC8-201ENST00000265038 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
ERCC8-201ENST00000265038 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
ERCC8-201ENST00000265038 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
ERCC8-201ENST00000265038 USP47Q96K76 1375 aa11.89□□□□□ -0.51
ERCC8-201ENST00000265038 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
ERCC8-201ENST00000265038 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
ERCC8-201ENST00000265038 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
ERCC8-201ENST00000265038 AFF2P51816 1311 aa11.87□□□□□ -0.51
ERCC8-201ENST00000265038 NGLY1Q96IV0 654 aa11.87□□□□□ -0.51
ERCC8-201ENST00000265038 PUS7Q96PZ0 661 aaKnown RBP11.87□□□□□ -0.51
ERCC8-201ENST00000265038 COL22A1Q8NFW1 1626 aaPredicted RBP11.87□□□□□ -0.51
ERCC8-201ENST00000265038 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
ERCC8-201ENST00000265038 TOPAZ1Q8N9V7 1692 aa11.86□□□□□ -0.51
ERCC8-201ENST00000265038 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
ERCC8-201ENST00000265038 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms