RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 UGGT1Q9NYU2 1555 aa10.79□□□□□ -0.68
GTF3C3-201ENST00000263956 XPCQ01831 940 aaPredicted RBP10.79□□□□□ -0.68
GTF3C3-201ENST00000263956 TOM1O60784 492 aa10.79□□□□□ -0.68
GTF3C3-201ENST00000263956 IQGAP3Q86VI3 1631 aa10.78□□□□□ -0.68
GTF3C3-201ENST00000263956 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
GTF3C3-201ENST00000263956 UNC13BO14795 1591 aa10.77□□□□□ -0.68
GTF3C3-201ENST00000263956 ZMYM4Q5VZL5 1548 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 ABCA6Q8N139 1617 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 MTHFSP49914 203 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 NINLQ9Y2I6 1382 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.69
GTF3C3-201ENST00000263956 SPATA31E1Q6ZUB1 1445 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 C11orf95C9JLR9 678 aaPredicted RBP10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 CCDC146Q8IYE0 955 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 PUS7Q96PZ0 661 aaKnown RBP10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 ARXQ96QS3 562 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 PLA2R1Q13018 1463 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
GTF3C3-201ENST00000263956 KRT28Q7Z3Y7 464 aa10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 LMTK2Q8IWU2 1503 aa10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 KCNH5Q8NCM2 988 aa10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
GTF3C3-201ENST00000263956 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 NUTM2BA6NNL0 878 aaPredicted RBP10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 NUTM2EB1AL46 878 aaPredicted RBP10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 NUTM2AQ8IVF1 878 aaPredicted RBP10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 PRDM11Q9NQV5 511 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 ACEP12821 1306 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
GTF3C3-201ENST00000263956 A2ML1A8K2U0 1454 aa10.73□□□□□ -0.69
GTF3C3-201ENST00000263956 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
GTF3C3-201ENST00000263956 MYH16Q9H6N6 1097 aa10.73□□□□□ -0.69
GTF3C3-201ENST00000263956 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
GTF3C3-201ENST00000263956 TESK2Q96S53 571 aa10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 BRD4O60885 1362 aaPredicted RBP10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 FKBP8Q14318 412 aa10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 NME9Q86XW9 330 aa10.72□□□□□ -0.69
GTF3C3-201ENST00000263956 ZC3H6P61129 1189 aaKnown RBP10.71□□□□□ -0.69
GTF3C3-201ENST00000263956 MYOM2P54296 1465 aa10.71□□□□□ -0.7
GTF3C3-201ENST00000263956 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 SMG6Q86US8 1419 aaKnown RBP10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 RRP7AQ9Y3A4 280 aaKnown RBP10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 RNF17Q9BXT8 1623 aaKnown RBP10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 HMOX1P09601 288 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
GTF3C3-201ENST00000263956 MS4A1P11836 297 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 TEFQ10587 303 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 FTSJ3Q8IY81 847 aaKnown RBP10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 METP08581 1390 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 TTC21AQ8NDW8 1320 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 ZFYVE9O95405 1425 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 APAF1O14727 1248 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 RRS1Q15050 365 aaKnown RBP10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
GTF3C3-201ENST00000263956 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 PTPRMP28827 1452 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 KIF1BO60333 1816 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 ANKRD36BQ8N2N9 1353 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 NSD2O96028 1365 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
GTF3C3-201ENST00000263956 USP35Q9P2H5 1018 aa10.67□□□□□ -0.7
GTF3C3-201ENST00000263956 CEP152O94986 1710 aa10.67□□□□□ -0.7
GTF3C3-201ENST00000263956 CAMSAP1Q5T5Y3 1602 aa10.67□□□□□ -0.7
GTF3C3-201ENST00000263956 PIK3C2GO75747 1445 aa10.67□□□□□ -0.7
GTF3C3-201ENST00000263956 RIPK4P57078 832 aa10.67□□□□□ -0.7
GTF3C3-201ENST00000263956 PLEKHO1Q53GL0 409 aaPredicted RBP10.66□□□□□ -0.7
GTF3C3-201ENST00000263956 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
GTF3C3-201ENST00000263956 CLTCL1P53675 1640 aa10.66□□□□□ -0.7
GTF3C3-201ENST00000263956 CHMP4BQ9H444 224 aaKnown RBP10.66□□□□□ -0.7
GTF3C3-201ENST00000263956 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
GTF3C3-201ENST00000263956 ADGRB3O60242 1522 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 SLAIN2Q9P270 581 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 PPRC1Q5VV67 1664 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 RICTORQ6R327 1708 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 CCDC136Q96JN2 1154 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 SUPT16HQ9Y5B9 1047 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-201ENST00000263956 SPHKAPQ2M3C7 1700 aa10.65□□□□□ -0.71
GTF3C3-201ENST00000263956 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
GTF3C3-201ENST00000263956 E9PCH4 1651 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms