RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 PDE3BQ13370 1112 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 SUPT16HQ9Y5B9 1047 aaKnown RBP6.86□□□□□ -1.31
CDH19-201ENST00000262150 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 EIF2S2P20042 333 aaKnown RBP6.86□□□□□ -1.31
CDH19-201ENST00000262150 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 KCNA6P17658 529 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 RRS1Q15050 365 aaKnown RBP6.86□□□□□ -1.31
CDH19-201ENST00000262150 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 C19orf44Q9H6X5 657 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 RIPK4P57078 832 aa6.86□□□□□ -1.31
CDH19-201ENST00000262150 SLC4A10Q6U841 1118 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
CDH19-201ENST00000262150 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 DNMT1P26358 1616 aaKnown RBP6.85□□□□□ -1.31
CDH19-201ENST00000262150 MAGI2Q86UL8 1455 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 APAF1O14727 1248 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 TBX22Q9Y458 520 aa6.85□□□□□ -1.31
CDH19-201ENST00000262150 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
CDH19-201ENST00000262150 TAF7LQ5H9L4 462 aa6.84□□□□□ -1.31
CDH19-201ENST00000262150 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.32
CDH19-201ENST00000262150 NME9Q86XW9 330 aa6.84□□□□□ -1.32
CDH19-201ENST00000262150 RBM42Q9BTD8 480 aaKnown RBP6.84□□□□□ -1.32
CDH19-201ENST00000262150 ADCY10Q96PN6 1610 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 RPRD2Q5VT52 1461 aaKnown RBP6.83□□□□□ -1.32
CDH19-201ENST00000262150 NPHP3Q7Z494 1330 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 ITPRIPQ8IWB1 547 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 MLH3Q9UHC1 1453 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 ACEP12821 1306 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 SULT6B1Q6IMI4 303 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 G3V3G9 751 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 APBB1O00213 710 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 DCAF8Q5TAQ9 597 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 RUNDC1Q96C34 613 aa6.83□□□□□ -1.32
CDH19-201ENST00000262150 MBD5Q9P267 1494 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 TSPYL4Q9UJ04 414 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 SPG7Q9UQ90 795 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 SAMD9LQ8IVG5 1584 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 SCAF11Q99590 1463 aaKnown RBP6.82□□□□□ -1.32
CDH19-201ENST00000262150 PRKAR2BP31323 418 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 GAS2L2Q8NHY3 880 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 NSD3Q9BZ95 1437 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 ADGRL2O95490 1459 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 PPP2R1AP30153 589 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 ZNF530Q6P9A1 599 aaPredicted RBP6.82□□□□□ -1.32
CDH19-201ENST00000262150 ABCC1P33527 1531 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 TMEM2Q9UHN6 1383 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
CDH19-201ENST00000262150 LTKP29376 864 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 CLUAP1Q96AJ1 413 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 MAST1Q9Y2H9 1570 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 CHRNA2Q15822 529 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 ARHGEF5Q12774 1597 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 CABP4P57796 275 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 HDAC5Q9UQL6 1122 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 RCAN3Q9UKA8 241 aa6.81□□□□□ -1.32
CDH19-201ENST00000262150 TCERG1O14776 1098 aaKnown RBP6.8□□□□□ -1.32
CDH19-201ENST00000262150 NPATQ14207 1427 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 NEXNQ0ZGT2 675 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 LRRC59Q96AG4 307 aaKnown RBP6.8□□□□□ -1.32
CDH19-201ENST00000262150 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 PREX2Q70Z35 1606 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
CDH19-201ENST00000262150 ANP32AP39687 249 aaKnown RBP6.79□□□□□ -1.32
CDH19-201ENST00000262150 GNAI1P63096 354 aa6.79□□□□□ -1.32
CDH19-201ENST00000262150 CABLES1Q8TDN4 633 aa6.79□□□□□ -1.32
CDH19-201ENST00000262150 RGS3P49796 1198 aa6.79□□□□□ -1.32
CDH19-201ENST00000262150 USHBP1Q8N6Y0 703 aa6.79□□□□□ -1.32
CDH19-201ENST00000262150 E9PSI1 815 aa6.79□□□□□ -1.32
CDH19-201ENST00000262150 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
CDH19-201ENST00000262150 AIMP1Q12904 312 aaKnown RBP6.79□□□□□ -1.32
CDH19-201ENST00000262150 ARHGEF12Q9NZN5 1544 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 DDX58O95786 925 aaKnown RBP6.78□□□□□ -1.32
CDH19-201ENST00000262150 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 KDM5DQ9BY66 1539 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 PZPP20742 1482 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 HSP90AB1P08238 724 aaKnown RBP6.78□□□□□ -1.32
CDH19-201ENST00000262150 TCP11L2Q8N4U5 519 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 SLAIN2Q9P270 581 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 YTHDC2Q9H6S0 1430 aaKnown RBP6.78□□□□□ -1.32
CDH19-201ENST00000262150 DCAF8L1A6NGE4 600 aa6.78□□□□□ -1.32
CDH19-201ENST00000262150 FRAT2O75474 233 aaPredicted RBP6.78□□□□□ -1.32
CDH19-201ENST00000262150 EXOC5O00471 708 aa6.77□□□□□ -1.33
CDH19-201ENST00000262150 PPIP5K1Q6PFW1 1433 aa6.77□□□□□ -1.33
CDH19-201ENST00000262150 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
CDH19-201ENST00000262150 ORAI2Q96SN7 254 aa6.77□□□□□ -1.33
CDH19-201ENST00000262150 NPHP4O75161 1426 aaPredicted RBP6.77□□□□□ -1.33
CDH19-201ENST00000262150 C9orf78Q9NZ63 289 aaPredicted RBP6.77□□□□□ -1.33
CDH19-201ENST00000262150 FAM177BA6PVY3 158 aa6.77□□□□□ -1.33
CDH19-201ENST00000262150 KCNJ4P48050 445 aa6.77□□□□□ -1.33
CDH19-201ENST00000262150 TTC21BQ7Z4L5 1316 aa6.76□□□□□ -1.33
CDH19-201ENST00000262150 CFAP65Q6ZU64 1925 aaKnown RBP6.76□□□□□ -1.33
CDH19-201ENST00000262150 PRAG1Q86YV5 1406 aa6.76□□□□□ -1.33
CDH19-201ENST00000262150 UGGT1Q9NYU2 1555 aa6.76□□□□□ -1.33
CDH19-201ENST00000262150 SHROOM2Q13796 1616 aa6.76□□□□□ -1.33
CDH19-201ENST00000262150 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
CDH19-201ENST00000262150 HMMRO75330 724 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms