RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 ROCK2O75116 1388 aaKnown RBP26.72■■□□□ 1.87
CYSTM1-201ENST00000261811 WAPLQ7Z5K2 1190 aa26.72■■□□□ 1.87
CYSTM1-201ENST00000261811 NBPF1Q3BBV0 1214 aa26.71■■□□□ 1.87
CYSTM1-201ENST00000261811 PRAM1Q96QH2 718 aa26.71■■□□□ 1.87
CYSTM1-201ENST00000261811 SLAIN2Q9P270 581 aa26.69■■□□□ 1.86
CYSTM1-201ENST00000261811 CDC42BPGQ6DT37 1551 aa26.68■■□□□ 1.86
CYSTM1-201ENST00000261811 NBPF8Q3BBV2 869 aa26.67■■□□□ 1.86
CYSTM1-201ENST00000261811 ROBO1Q9Y6N7 1651 aa26.65■■□□□ 1.86
CYSTM1-201ENST00000261811 PLEKHH1Q9ULM0 1364 aa26.65■■□□□ 1.86
CYSTM1-201ENST00000261811 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
CYSTM1-201ENST00000261811 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
CYSTM1-201ENST00000261811 EIF3AQ14152 1382 aaKnown RBP26.63■■□□□ 1.85
CYSTM1-201ENST00000261811 CARD11Q9BXL7 1154 aa26.62■■□□□ 1.85
CYSTM1-201ENST00000261811 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
CYSTM1-201ENST00000261811 GPRASP1Q5JY77 1395 aa26.61■■□□□ 1.85
CYSTM1-201ENST00000261811 QRICH2Q9H0J4 1663 aa26.6■■□□□ 1.85
CYSTM1-201ENST00000261811 ADGRB2O60241 1585 aa26.6■■□□□ 1.85
CYSTM1-201ENST00000261811 MST1RQ04912 1400 aa26.6■■□□□ 1.85
CYSTM1-201ENST00000261811 CENPJQ9HC77 1338 aaPredicted RBP26.57■■□□□ 1.84
CYSTM1-201ENST00000261811 MINK1Q8N4C8 1332 aaPredicted RBP26.57■■□□□ 1.84
CYSTM1-201ENST00000261811 RGPD8O14715 1765 aaPredicted RBP26.56■■□□□ 1.84
CYSTM1-201ENST00000261811 PHLPP1O60346 1717 aa26.54■■□□□ 1.84
CYSTM1-201ENST00000261811 C1orf167Q5SNV9 1468 aa26.54■■□□□ 1.84
CYSTM1-201ENST00000261811 HIRIP3Q9BW71 556 aaPredicted RBP26.52■■□□□ 1.84
CYSTM1-201ENST00000261811 ITSN1Q15811 1721 aa26.51■■□□□ 1.83
CYSTM1-201ENST00000261811 WASLO00401 505 aaPredicted RBP26.5■■□□□ 1.83
CYSTM1-201ENST00000261811 BRINP3Q76B58 766 aa26.5■■□□□ 1.83
CYSTM1-201ENST00000261811 KIF1AQ12756 1690 aa26.49■■□□□ 1.83
CYSTM1-201ENST00000261811 NUTM2FA1L443 756 aa26.48■■□□□ 1.83
CYSTM1-201ENST00000261811 HSPA1LP34931 641 aa26.48■■□□□ 1.83
CYSTM1-201ENST00000261811 ESCO1Q5FWF5 840 aa26.48■■□□□ 1.83
CYSTM1-201ENST00000261811 NHSL1Q5SYE7 1610 aa26.48■■□□□ 1.83
CYSTM1-201ENST00000261811 ANKARQ7Z5J8 1434 aa26.47■■□□□ 1.83
CYSTM1-201ENST00000261811 AHDC1Q5TGY3 1603 aaPredicted RBP26.46■■□□□ 1.83
CYSTM1-201ENST00000261811 TULP4Q9NRJ4 1543 aa26.46■■□□□ 1.83
CYSTM1-201ENST00000261811 SLC24A1O60721 1099 aa26.45■■□□□ 1.83
CYSTM1-201ENST00000261811 ORAI2Q96SN7 254 aa26.43■■□□□ 1.82
CYSTM1-201ENST00000261811 CDK19Q9BWU1 502 aa26.43■■□□□ 1.82
CYSTM1-201ENST00000261811 EVC2Q86UK5 1308 aa26.43■■□□□ 1.82
CYSTM1-201ENST00000261811 USP32Q8NFA0 1604 aa26.42■■□□□ 1.82
CYSTM1-201ENST00000261811 SRPK2P78362 688 aaKnown RBP26.4■■□□□ 1.82
CYSTM1-201ENST00000261811 SBNO2Q9Y2G9 1366 aa26.4■■□□□ 1.82
CYSTM1-201ENST00000261811 NPHP3Q7Z494 1330 aa26.39■■□□□ 1.82
CYSTM1-201ENST00000261811 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.81
CYSTM1-201ENST00000261811 USP47Q96K76 1375 aa26.38■■□□□ 1.81
CYSTM1-201ENST00000261811 COL16A1Q07092 1604 aaPredicted RBP26.38■■□□□ 1.81
CYSTM1-201ENST00000261811 NUDT16Q96DE0 195 aaKnown RBP26.37■■□□□ 1.81
CYSTM1-201ENST00000261811 ST20-MTHFSA0A0A6YYL1 179 aa26.35■■□□□ 1.81
CYSTM1-201ENST00000261811 TOPAZ1Q8N9V7 1692 aa26.34■■□□□ 1.81
CYSTM1-201ENST00000261811 FOXO3O43524 673 aa26.34■■□□□ 1.81
CYSTM1-201ENST00000261811 LRRC59Q96AG4 307 aaKnown RBP26.34■■□□□ 1.81
CYSTM1-201ENST00000261811 CCDC61Q9Y6R9 512 aa26.34■■□□□ 1.81
CYSTM1-201ENST00000261811 ATP7BP35670 1465 aa26.33■■□□□ 1.81
CYSTM1-201ENST00000261811 SHPRHQ149N8 1683 aa26.31■■□□□ 1.8
CYSTM1-201ENST00000261811 PSME1Q06323 249 aa26.31■■□□□ 1.8
CYSTM1-201ENST00000261811 CABP2Q9NPB3 220 aa26.31■■□□□ 1.8
CYSTM1-201ENST00000261811 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
CYSTM1-201ENST00000261811 JCADQ9P266 1359 aa26.3■■□□□ 1.8
CYSTM1-201ENST00000261811 NGDNQ8NEJ9 315 aaKnown RBP26.3■■□□□ 1.8
CYSTM1-201ENST00000261811 PMFBP1Q8TBY8 1022 aa26.3■■□□□ 1.8
CYSTM1-201ENST00000261811 EIF4G2P78344 907 aaKnown RBP eCLIP26.29■■□□□ 1.8
CYSTM1-201ENST00000261811 DDX17Q92841 729 aaKnown RBP26.29■■□□□ 1.8
CYSTM1-201ENST00000261811 SOS2Q07890 1332 aaPredicted RBP26.29■■□□□ 1.8
CYSTM1-201ENST00000261811 ATAD2Q6PL18 1390 aa26.28■■□□□ 1.8
CYSTM1-201ENST00000261811 TMF1P82094 1093 aa26.27■■□□□ 1.8
CYSTM1-201ENST00000261811 KRT28Q7Z3Y7 464 aa26.26■■□□□ 1.79
CYSTM1-201ENST00000261811 PPIP5K1Q6PFW1 1433 aa26.26■■□□□ 1.79
CYSTM1-201ENST00000261811 PXDNQ92626 1479 aa26.25■■□□□ 1.79
CYSTM1-201ENST00000261811 CDCA8Q53HL2 280 aa26.25■■□□□ 1.79
CYSTM1-201ENST00000261811 PUS7Q96PZ0 661 aaKnown RBP26.25■■□□□ 1.79
CYSTM1-201ENST00000261811 TESK2Q96S53 571 aa26.24■■□□□ 1.79
CYSTM1-201ENST00000261811 PLEKHG3A1L390 1219 aa26.23■■□□□ 1.79
CYSTM1-201ENST00000261811 XPCQ01831 940 aaPredicted RBP26.22■■□□□ 1.79
CYSTM1-201ENST00000261811 SPATA31A6Q5VVP1 1343 aa26.21■■□□□ 1.79
CYSTM1-201ENST00000261811 POLR3AO14802 1390 aaPredicted RBP26.2■■□□□ 1.78
CYSTM1-201ENST00000261811 ACEP12821 1306 aa26.2■■□□□ 1.78
CYSTM1-201ENST00000261811 CABP1Q9NZU7 370 aa26.19■■□□□ 1.78
CYSTM1-201ENST00000261811 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
CYSTM1-201ENST00000261811 AKAP12Q02952 1782 aa26.18■■□□□ 1.78
CYSTM1-201ENST00000261811 TRPM3Q9HCF6 1732 aaPredicted RBP26.18■■□□□ 1.78
CYSTM1-201ENST00000261811 COL22A1Q8NFW1 1626 aaPredicted RBP26.17■■□□□ 1.78
CYSTM1-201ENST00000261811 HSPA5P11021 654 aaKnown RBP26.16■■□□□ 1.78
CYSTM1-201ENST00000261811 SPATA31A3Q5VYP0 1347 aa26.16■■□□□ 1.78
CYSTM1-201ENST00000261811 TNS3Q68CZ2 1445 aa26.16■■□□□ 1.78
CYSTM1-201ENST00000261811 ZNF692Q9BU19 519 aaPredicted RBP26.15■■□□□ 1.78
CYSTM1-201ENST00000261811 ARHGEF10O15013 1369 aa26.15■■□□□ 1.78
CYSTM1-201ENST00000261811 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
CYSTM1-201ENST00000261811 PAK3O75914 559 aaPredicted RBP26.14■■□□□ 1.78
CYSTM1-201ENST00000261811 LMOD2Q6P5Q4 547 aa26.14■■□□□ 1.78
CYSTM1-201ENST00000261811 TMC1Q8TDI8 760 aa26.14■■□□□ 1.78
CYSTM1-201ENST00000261811 BRD4O60885 1362 aaPredicted RBP26.14■■□□□ 1.78
CYSTM1-201ENST00000261811 NINLQ9Y2I6 1382 aa26.14■■□□□ 1.78
CYSTM1-201ENST00000261811 ALS2Q96Q42 1657 aa26.13■■□□□ 1.77
CYSTM1-201ENST00000261811 MED1Q15648 1581 aaPredicted RBP26.13■■□□□ 1.77
CYSTM1-201ENST00000261811 DISP3Q9P2K9 1392 aa26.13■■□□□ 1.77
CYSTM1-201ENST00000261811 ZEB1P37275 1124 aaPredicted RBP26.13■■□□□ 1.77
CYSTM1-201ENST00000261811 HDGFL2Q7Z4V5 671 aaPredicted RBP26.11■■□□□ 1.77
CYSTM1-201ENST00000261811 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
CYSTM1-201ENST00000261811 MEX3CQ5U5Q3 659 aaKnown RBP26.1■■□□□ 1.77
CYSTM1-201ENST00000261811 MON2Q7Z3U7 1717 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms