RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DLC1Q96QB1 1528 aa23.98■■□□□ 1.43
SDCBP-201ENST00000260130 POGKQ9P215 609 aa23.98■■□□□ 1.43
SDCBP-201ENST00000260130 NALCNQ8IZF0 1738 aa23.97■■□□□ 1.43
SDCBP-201ENST00000260130 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
SDCBP-201ENST00000260130 SAFB2Q14151 953 aaKnown RBP eCLIP23.95■■□□□ 1.42
SDCBP-201ENST00000260130 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
SDCBP-201ENST00000260130 HSPA1LP34931 641 aa23.93■■□□□ 1.42
SDCBP-201ENST00000260130 MST1RQ04912 1400 aa23.92■■□□□ 1.42
SDCBP-201ENST00000260130 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
SDCBP-201ENST00000260130 ROCK2O75116 1388 aaKnown RBP23.9■■□□□ 1.42
SDCBP-201ENST00000260130 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
SDCBP-201ENST00000260130 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
SDCBP-201ENST00000260130 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
SDCBP-201ENST00000260130 C1orf167Q5SNV9 1468 aa23.86■■□□□ 1.41
SDCBP-201ENST00000260130 MINK1Q8N4C8 1332 aaPredicted RBP23.86■■□□□ 1.41
SDCBP-201ENST00000260130 ARHGEF28Q8N1W1 1705 aaKnown RBP23.84■■□□□ 1.41
SDCBP-201ENST00000260130 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
SDCBP-201ENST00000260130 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
SDCBP-201ENST00000260130 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
SDCBP-201ENST00000260130 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
SDCBP-201ENST00000260130 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
SDCBP-201ENST00000260130 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
SDCBP-201ENST00000260130 CENPJQ9HC77 1338 aaPredicted RBP23.81■■□□□ 1.4
SDCBP-201ENST00000260130 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
SDCBP-201ENST00000260130 ADGRB2O60241 1585 aa23.79■■□□□ 1.4
SDCBP-201ENST00000260130 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
SDCBP-201ENST00000260130 FMN2Q9NZ56 1722 aa23.77■■□□□ 1.4
SDCBP-201ENST00000260130 EIF3AQ14152 1382 aaKnown RBP23.76■■□□□ 1.39
SDCBP-201ENST00000260130 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
SDCBP-201ENST00000260130 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
SDCBP-201ENST00000260130 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
SDCBP-201ENST00000260130 ANKARQ7Z5J8 1434 aa23.73■■□□□ 1.39
SDCBP-201ENST00000260130 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
SDCBP-201ENST00000260130 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
SDCBP-201ENST00000260130 FOXO3O43524 673 aa23.69■■□□□ 1.38
SDCBP-201ENST00000260130 PHF8Q9UPP1 1060 aa23.69■■□□□ 1.38
SDCBP-201ENST00000260130 TULP4Q9NRJ4 1543 aa23.69■■□□□ 1.38
SDCBP-201ENST00000260130 COL16A1Q07092 1604 aaPredicted RBP23.69■■□□□ 1.38
SDCBP-201ENST00000260130 NHSL1Q5SYE7 1610 aa23.69■■□□□ 1.38
SDCBP-201ENST00000260130 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
SDCBP-201ENST00000260130 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
SDCBP-201ENST00000260130 QRICH2Q9H0J4 1663 aa23.68■■□□□ 1.38
SDCBP-201ENST00000260130 LRRC59Q96AG4 307 aaKnown RBP23.67■■□□□ 1.38
SDCBP-201ENST00000260130 SOS2Q07890 1332 aaPredicted RBP23.67■■□□□ 1.38
SDCBP-201ENST00000260130 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
SDCBP-201ENST00000260130 JCADQ9P266 1359 aa23.66■■□□□ 1.38
SDCBP-201ENST00000260130 SRPK2P78362 688 aaKnown RBP23.65■■□□□ 1.38
SDCBP-201ENST00000260130 PMFBP1Q8TBY8 1022 aa23.65■■□□□ 1.38
SDCBP-201ENST00000260130 EVC2Q86UK5 1308 aa23.65■■□□□ 1.38
SDCBP-201ENST00000260130 RGPD8O14715 1765 aaPredicted RBP23.65■■□□□ 1.38
SDCBP-201ENST00000260130 ATP7BP35670 1465 aa23.63■■□□□ 1.37
SDCBP-201ENST00000260130 CABP2Q9NPB3 220 aa23.63■■□□□ 1.37
SDCBP-201ENST00000260130 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
SDCBP-201ENST00000260130 SBNO2Q9Y2G9 1366 aa23.63■■□□□ 1.37
SDCBP-201ENST00000260130 KIF1AQ12756 1690 aa23.63■■□□□ 1.37
SDCBP-201ENST00000260130 XPCQ01831 940 aaPredicted RBP23.62■■□□□ 1.37
SDCBP-201ENST00000260130 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
SDCBP-201ENST00000260130 KRT28Q7Z3Y7 464 aa23.61■■□□□ 1.37
SDCBP-201ENST00000260130 USP47Q96K76 1375 aa23.6■■□□□ 1.37
SDCBP-201ENST00000260130 PXDNQ92626 1479 aa23.6■■□□□ 1.37
SDCBP-201ENST00000260130 PSME1Q06323 249 aa23.59■■□□□ 1.37
SDCBP-201ENST00000260130 NGDNQ8NEJ9 315 aaKnown RBP23.58■■□□□ 1.37
SDCBP-201ENST00000260130 TESK2Q96S53 571 aa23.57■■□□□ 1.36
SDCBP-201ENST00000260130 PLEKHG3A1L390 1219 aa23.57■■□□□ 1.36
SDCBP-201ENST00000260130 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
SDCBP-201ENST00000260130 SLC24A1O60721 1099 aa23.56■■□□□ 1.36
SDCBP-201ENST00000260130 PNPLA6Q8IY17 1366 aa23.55■■□□□ 1.36
SDCBP-201ENST00000260130 ITSN1Q15811 1721 aa23.54■■□□□ 1.36
SDCBP-201ENST00000260130 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
SDCBP-201ENST00000260130 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
SDCBP-201ENST00000260130 CABP1Q9NZU7 370 aa23.53■■□□□ 1.36
SDCBP-201ENST00000260130 ACEP12821 1306 aa23.53■■□□□ 1.36
SDCBP-201ENST00000260130 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
SDCBP-201ENST00000260130 TOPAZ1Q8N9V7 1692 aa23.52■■□□□ 1.36
SDCBP-201ENST00000260130 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.35
SDCBP-201ENST00000260130 MED1Q15648 1581 aaPredicted RBP23.51■■□□□ 1.35
SDCBP-201ENST00000260130 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
SDCBP-201ENST00000260130 ATAD2Q6PL18 1390 aa23.51■■□□□ 1.35
SDCBP-201ENST00000260130 NUTM2BA6NNL0 878 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-201ENST00000260130 NUTM2EB1AL46 878 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-201ENST00000260130 NUTM2AQ8IVF1 878 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-201ENST00000260130 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
SDCBP-201ENST00000260130 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.35
SDCBP-201ENST00000260130 TNS3Q68CZ2 1445 aa23.48■■□□□ 1.35
SDCBP-201ENST00000260130 TMF1P82094 1093 aa23.47■■□□□ 1.35
SDCBP-201ENST00000260130 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
SDCBP-201ENST00000260130 LMOD2Q6P5Q4 547 aa23.47■■□□□ 1.35
SDCBP-201ENST00000260130 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.35
SDCBP-201ENST00000260130 LRP6O75581 1613 aa23.45■■□□□ 1.34
SDCBP-201ENST00000260130 ARHGEF10O15013 1369 aa23.44■■□□□ 1.34
SDCBP-201ENST00000260130 HSPA5P11021 654 aaKnown RBP23.43■■□□□ 1.34
SDCBP-201ENST00000260130 MEX3CQ5U5Q3 659 aaKnown RBP23.43■■□□□ 1.34
SDCBP-201ENST00000260130 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
SDCBP-201ENST00000260130 COL22A1Q8NFW1 1626 aaPredicted RBP23.43■■□□□ 1.34
SDCBP-201ENST00000260130 TMC1Q8TDI8 760 aa23.42■■□□□ 1.34
SDCBP-201ENST00000260130 ZNF692Q9BU19 519 aaPredicted RBP23.42■■□□□ 1.34
SDCBP-201ENST00000260130 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
SDCBP-201ENST00000260130 CDCA8Q53HL2 280 aa23.41■■□□□ 1.34
SDCBP-201ENST00000260130 SLC12A5Q9H2X9 1139 aa23.4■■□□□ 1.34
SDCBP-201ENST00000260130 ADAMTS2O95450 1211 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms