RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 NKTRP30414 1462 aaKnown RBP17.62■□□□□ 0.41
LIMD2-201ENST00000259006 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
LIMD2-201ENST00000259006 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
LIMD2-201ENST00000259006 ERBB4Q15303 1308 aa17.62■□□□□ 0.41
LIMD2-201ENST00000259006 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
LIMD2-201ENST00000259006 FANCAO15360 1455 aa17.61■□□□□ 0.41
LIMD2-201ENST00000259006 CARD14Q9BXL6 1004 aa17.61■□□□□ 0.41
LIMD2-201ENST00000259006 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
LIMD2-201ENST00000259006 CROCC2H7BZ55 1655 aa17.6■□□□□ 0.41
LIMD2-201ENST00000259006 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
LIMD2-201ENST00000259006 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
LIMD2-201ENST00000259006 CD109Q6YHK3 1445 aa17.59■□□□□ 0.41
LIMD2-201ENST00000259006 PREX2Q70Z35 1606 aa17.59■□□□□ 0.41
LIMD2-201ENST00000259006 EIF3AQ14152 1382 aaKnown RBP17.59■□□□□ 0.41
LIMD2-201ENST00000259006 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
LIMD2-201ENST00000259006 GGT6Q6P531 493 aa17.59■□□□□ 0.41
LIMD2-201ENST00000259006 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
LIMD2-201ENST00000259006 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
LIMD2-201ENST00000259006 MYO5CQ9NQX4 1742 aa17.57■□□□□ 0.4
LIMD2-201ENST00000259006 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
LIMD2-201ENST00000259006 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
LIMD2-201ENST00000259006 ANTXR1Q9H6X2 564 aa17.56■□□□□ 0.4
LIMD2-201ENST00000259006 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
LIMD2-201ENST00000259006 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 FTSJ3Q8IY81 847 aaKnown RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
LIMD2-201ENST00000259006 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-201ENST00000259006 MCM4P33991 863 aa17.54■□□□□ 0.4
LIMD2-201ENST00000259006 SMAP1Q8IYB5 467 aaPredicted RBP17.54■□□□□ 0.4
LIMD2-201ENST00000259006 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
LIMD2-201ENST00000259006 TRAK2O60296 914 aa17.54■□□□□ 0.4
LIMD2-201ENST00000259006 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
LIMD2-201ENST00000259006 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
LIMD2-201ENST00000259006 PRDM15P57071 1507 aaPredicted RBP17.53■□□□□ 0.4
LIMD2-201ENST00000259006 MYH16Q9H6N6 1097 aa17.53■□□□□ 0.4
LIMD2-201ENST00000259006 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
LIMD2-201ENST00000259006 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
LIMD2-201ENST00000259006 SHANK2Q9UPX8 1470 aa17.52■□□□□ 0.4
LIMD2-201ENST00000259006 SAFB2Q14151 953 aaKnown RBP eCLIP17.52■□□□□ 0.39
LIMD2-201ENST00000259006 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
LIMD2-201ENST00000259006 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
LIMD2-201ENST00000259006 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
LIMD2-201ENST00000259006 RIPK4P57078 832 aa17.5■□□□□ 0.39
LIMD2-201ENST00000259006 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
LIMD2-201ENST00000259006 MTHFSP49914 203 aa17.5■□□□□ 0.39
LIMD2-201ENST00000259006 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
LIMD2-201ENST00000259006 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
LIMD2-201ENST00000259006 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
LIMD2-201ENST00000259006 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
LIMD2-201ENST00000259006 TMEM51Q9NW97 253 aa17.48■□□□□ 0.39
LIMD2-201ENST00000259006 INSRP06213 1382 aa17.48■□□□□ 0.39
LIMD2-201ENST00000259006 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
LIMD2-201ENST00000259006 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
LIMD2-201ENST00000259006 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
LIMD2-201ENST00000259006 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
LIMD2-201ENST00000259006 MLECQ14165 292 aa17.47■□□□□ 0.39
LIMD2-201ENST00000259006 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
LIMD2-201ENST00000259006 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
LIMD2-201ENST00000259006 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
LIMD2-201ENST00000259006 RUNDC1Q96C34 613 aa17.46■□□□□ 0.39
LIMD2-201ENST00000259006 ARHGEF5Q12774 1597 aa17.46■□□□□ 0.39
LIMD2-201ENST00000259006 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
LIMD2-201ENST00000259006 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
LIMD2-201ENST00000259006 CHMP5Q9NZZ3 219 aa17.45■□□□□ 0.38
LIMD2-201ENST00000259006 ABCC1P33527 1531 aa17.45■□□□□ 0.38
LIMD2-201ENST00000259006 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
LIMD2-201ENST00000259006 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
LIMD2-201ENST00000259006 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
LIMD2-201ENST00000259006 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
LIMD2-201ENST00000259006 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
LIMD2-201ENST00000259006 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
LIMD2-201ENST00000259006 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
LIMD2-201ENST00000259006 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
LIMD2-201ENST00000259006 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 ZBTB22O15209 634 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
LIMD2-201ENST00000259006 DMTNQ08495 405 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
LIMD2-201ENST00000259006 SCAF11Q99590 1463 aaKnown RBP17.41■□□□□ 0.38
LIMD2-201ENST00000259006 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
LIMD2-201ENST00000259006 MRE11P49959 708 aa17.4■□□□□ 0.38
LIMD2-201ENST00000259006 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
LIMD2-201ENST00000259006 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.37
LIMD2-201ENST00000259006 TRIM27P14373 513 aa17.39■□□□□ 0.37
LIMD2-201ENST00000259006 GAS2L3Q86XJ1 694 aa17.39■□□□□ 0.37
LIMD2-201ENST00000259006 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
LIMD2-201ENST00000259006 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.37
LIMD2-201ENST00000259006 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
LIMD2-201ENST00000259006 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
LIMD2-201ENST00000259006 ABCA9Q8IUA7 1624 aa17.38■□□□□ 0.37
LIMD2-201ENST00000259006 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
LIMD2-201ENST00000259006 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
LIMD2-201ENST00000259006 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
LIMD2-201ENST00000259006 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms