RNA–Protein interactions for RNA: ENST00000258104.7

DYSF-201, Transcript of dysferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DYSF, Length 6,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-201ENST00000258104 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 MPNDQ8N594 471 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 NUCB2P80303 420 aa18.12■□□□□ 0.49
DYSF-201ENST00000258104 CARMIL2Q6F5E8 1435 aa18.12■□□□□ 0.49
DYSF-201ENST00000258104 CDR1P51861 262 aa18.12■□□□□ 0.49
DYSF-201ENST00000258104 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
DYSF-201ENST00000258104 CWC22Q9HCG8 908 aaKnown RBP18.11■□□□□ 0.49
DYSF-201ENST00000258104 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
DYSF-201ENST00000258104 BRPF3Q9ULD4 1205 aa18.11■□□□□ 0.49
DYSF-201ENST00000258104 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.49
DYSF-201ENST00000258104 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
DYSF-201ENST00000258104 KLHL34Q8N239 644 aa18.1■□□□□ 0.49
DYSF-201ENST00000258104 ATP2B1P20020 1258 aa18.1■□□□□ 0.49
DYSF-201ENST00000258104 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
DYSF-201ENST00000258104 OFD1O75665 1012 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 CCDC144AA2RUR9 1427 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 USP47Q96K76 1375 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
DYSF-201ENST00000258104 SDF4Q9BRK5 362 aa18.08■□□□□ 0.49
DYSF-201ENST00000258104 RALYLQ86SE5 291 aaKnown RBP18.08■□□□□ 0.48
DYSF-201ENST00000258104 RDXP35241 583 aaKnown RBP18.07■□□□□ 0.48
DYSF-201ENST00000258104 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
DYSF-201ENST00000258104 NAT10Q9H0A0 1025 aaKnown RBP18.06■□□□□ 0.48
DYSF-201ENST00000258104 TRAK2O60296 914 aa18.06■□□□□ 0.48
DYSF-201ENST00000258104 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
DYSF-201ENST00000258104 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
DYSF-201ENST00000258104 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
DYSF-201ENST00000258104 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
DYSF-201ENST00000258104 API5Q9BZZ5 524 aaKnown RBP18.06■□□□□ 0.48
DYSF-201ENST00000258104 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 TSPYL1Q9H0U9 437 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 FAM177BA6PVY3 158 aa18.05■□□□□ 0.48
DYSF-201ENST00000258104 AXDND1Q5T1B0 1012 aaPredicted RBP18.05■□□□□ 0.48
DYSF-201ENST00000258104 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
DYSF-201ENST00000258104 ERC2O15083 957 aa18.04■□□□□ 0.48
DYSF-201ENST00000258104 DNAJC2Q99543 621 aaKnown RBP18.04■□□□□ 0.48
DYSF-201ENST00000258104 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
DYSF-201ENST00000258104 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
DYSF-201ENST00000258104 MRE11P49959 708 aa18.04■□□□□ 0.48
DYSF-201ENST00000258104 CWC15Q9P013 229 aaKnown RBP18.03■□□□□ 0.48
DYSF-201ENST00000258104 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
DYSF-201ENST00000258104 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
DYSF-201ENST00000258104 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
DYSF-201ENST00000258104 BRMS1Q9HCU9 246 aa18.03■□□□□ 0.48
DYSF-201ENST00000258104 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
DYSF-201ENST00000258104 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
DYSF-201ENST00000258104 CDC45O75419 566 aa18.02■□□□□ 0.48
DYSF-201ENST00000258104 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
DYSF-201ENST00000258104 DCTN1Q14203 1278 aa18.02■□□□□ 0.47
DYSF-201ENST00000258104 FAM177A1Q8N128 213 aaPredicted RBP18.01■□□□□ 0.47
DYSF-201ENST00000258104 PSME1Q06323 249 aa18.01■□□□□ 0.47
DYSF-201ENST00000258104 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
DYSF-201ENST00000258104 TMEM132AQ24JP5 1023 aa18.01■□□□□ 0.47
DYSF-201ENST00000258104 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
DYSF-201ENST00000258104 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
DYSF-201ENST00000258104 STK3Q13188 491 aa18■□□□□ 0.47
DYSF-201ENST00000258104 FIBPO43427 364 aa18■□□□□ 0.47
DYSF-201ENST00000258104 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
DYSF-201ENST00000258104 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
DYSF-201ENST00000258104 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
DYSF-201ENST00000258104 LEKR1Q6ZMV7 388 aa17.99■□□□□ 0.47
DYSF-201ENST00000258104 NEFHP12036 1026 aa17.99■□□□□ 0.47
DYSF-201ENST00000258104 ANKRD62A6NC57 917 aa17.99■□□□□ 0.47
DYSF-201ENST00000258104 UBTFL1P0CB47 393 aaPredicted RBP17.99■□□□□ 0.47
DYSF-201ENST00000258104 ERCC4Q92889 916 aaPredicted RBP17.98■□□□□ 0.47
DYSF-201ENST00000258104 MEX3CQ5U5Q3 659 aaKnown RBP17.98■□□□□ 0.47
DYSF-201ENST00000258104 MAGEC2Q9UBF1 373 aaPredicted RBP17.98■□□□□ 0.47
DYSF-201ENST00000258104 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
DYSF-201ENST00000258104 FAM193AP78312 1265 aa17.97■□□□□ 0.47
DYSF-201ENST00000258104 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
DYSF-201ENST00000258104 NEK4P51957 841 aa17.97■□□□□ 0.47
DYSF-201ENST00000258104 KINO60870 393 aaKnown RBP17.96■□□□□ 0.47
DYSF-201ENST00000258104 PSMA5P28066 241 aa17.96■□□□□ 0.47
DYSF-201ENST00000258104 CDK5RAP3Q96JB5 506 aa17.96■□□□□ 0.47
DYSF-201ENST00000258104 XBP1P17861 261 aa17.96■□□□□ 0.47
DYSF-201ENST00000258104 CENPHQ9H3R5 247 aa17.96■□□□□ 0.47
DYSF-201ENST00000258104 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.46
DYSF-201ENST00000258104 SMARCE1Q969G3 411 aa17.95■□□□□ 0.46
DYSF-201ENST00000258104 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
DYSF-201ENST00000258104 PKNOX2Q96KN3 472 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 CCDC66A2RUB6 948 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 SERPINC1P01008 464 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 MYO6Q9UM54 1294 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 FILIP1LQ4L180 1135 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 PAF1Q8N7H5 531 aa17.94■□□□□ 0.46
DYSF-201ENST00000258104 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
DYSF-201ENST00000258104 HSP90AB4PQ58FF6 505 aa17.93■□□□□ 0.46
DYSF-201ENST00000258104 LETM1O95202 739 aaPredicted RBP17.93■□□□□ 0.46
DYSF-201ENST00000258104 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
DYSF-201ENST00000258104 GNAI1P63096 354 aa17.93■□□□□ 0.46
DYSF-201ENST00000258104 ENOX2Q16206 610 aaKnown RBP17.93■□□□□ 0.46
DYSF-201ENST00000258104 VGFO15240 615 aaPredicted RBP17.92■□□□□ 0.46
DYSF-201ENST00000258104 KRT18P05783 430 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms