RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 PLEKHH1Q9ULM0 1364 aa26.86■■□□□ 1.89
UPK3B-201ENST00000257632 SIRT1Q96EB6 747 aa26.86■■□□□ 1.89
UPK3B-201ENST00000257632 TRAK1Q9UPV9 953 aa26.86■■□□□ 1.89
UPK3B-201ENST00000257632 DLC1Q96QB1 1528 aa26.85■■□□□ 1.89
UPK3B-201ENST00000257632 POGKQ9P215 609 aa26.84■■□□□ 1.89
UPK3B-201ENST00000257632 MST1RQ04912 1400 aa26.83■■□□□ 1.89
UPK3B-201ENST00000257632 PRAM1Q96QH2 718 aa26.83■■□□□ 1.89
UPK3B-201ENST00000257632 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
UPK3B-201ENST00000257632 CDC42BPGQ6DT37 1551 aa26.81■■□□□ 1.88
UPK3B-201ENST00000257632 NBPF1Q3BBV0 1214 aa26.78■■□□□ 1.88
UPK3B-201ENST00000257632 PHLPP1O60346 1717 aa26.77■■□□□ 1.88
UPK3B-201ENST00000257632 BRINP3Q76B58 766 aa26.77■■□□□ 1.88
UPK3B-201ENST00000257632 C1orf167Q5SNV9 1468 aa26.76■■□□□ 1.87
UPK3B-201ENST00000257632 ARHGEF28Q8N1W1 1705 aaKnown RBP26.76■■□□□ 1.87
UPK3B-201ENST00000257632 TRPM1Q7Z4N2 1603 aa26.75■■□□□ 1.87
UPK3B-201ENST00000257632 CLSPNQ9HAW4 1339 aa26.73■■□□□ 1.87
UPK3B-201ENST00000257632 NUTM2FA1L443 756 aa26.72■■□□□ 1.87
UPK3B-201ENST00000257632 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
UPK3B-201ENST00000257632 FMN2Q9NZ56 1722 aa26.71■■□□□ 1.87
UPK3B-201ENST00000257632 AHDC1Q5TGY3 1603 aaPredicted RBP26.71■■□□□ 1.87
UPK3B-201ENST00000257632 ROCK2O75116 1388 aaKnown RBP26.71■■□□□ 1.87
UPK3B-201ENST00000257632 MINK1Q8N4C8 1332 aaPredicted RBP26.7■■□□□ 1.87
UPK3B-201ENST00000257632 NBPF8Q3BBV2 869 aa26.69■■□□□ 1.86
UPK3B-201ENST00000257632 ORAI2Q96SN7 254 aa26.69■■□□□ 1.86
UPK3B-201ENST00000257632 ESCO1Q5FWF5 840 aa26.68■■□□□ 1.86
UPK3B-201ENST00000257632 HIRIP3Q9BW71 556 aaPredicted RBP26.68■■□□□ 1.86
UPK3B-201ENST00000257632 RGS17Q9UGC6 210 aaPredicted RBP26.68■■□□□ 1.86
UPK3B-201ENST00000257632 ADGRB2O60241 1585 aa26.67■■□□□ 1.86
UPK3B-201ENST00000257632 COL16A1Q07092 1604 aaPredicted RBP26.66■■□□□ 1.86
UPK3B-201ENST00000257632 NHSL1Q5SYE7 1610 aa26.66■■□□□ 1.86
UPK3B-201ENST00000257632 DDX17Q92841 729 aaKnown RBP26.62■■□□□ 1.85
UPK3B-201ENST00000257632 CENPJQ9HC77 1338 aaPredicted RBP26.62■■□□□ 1.85
UPK3B-201ENST00000257632 EIF3AQ14152 1382 aaKnown RBP26.61■■□□□ 1.85
UPK3B-201ENST00000257632 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
UPK3B-201ENST00000257632 JCADQ9P266 1359 aa26.6■■□□□ 1.85
UPK3B-201ENST00000257632 WASLO00401 505 aaPredicted RBP26.6■■□□□ 1.85
UPK3B-201ENST00000257632 RALGAPBQ86X10 1494 aa26.6■■□□□ 1.85
UPK3B-201ENST00000257632 ANKARQ7Z5J8 1434 aa26.58■■□□□ 1.85
UPK3B-201ENST00000257632 KIF1AQ12756 1690 aa26.58■■□□□ 1.85
UPK3B-201ENST00000257632 CARD11Q9BXL7 1154 aa26.58■■□□□ 1.85
UPK3B-201ENST00000257632 GPRASP1Q5JY77 1395 aa26.58■■□□□ 1.84
UPK3B-201ENST00000257632 QRICH2Q9H0J4 1663 aa26.57■■□□□ 1.84
UPK3B-201ENST00000257632 TIMELESSQ9UNS1 1208 aa26.57■■□□□ 1.84
UPK3B-201ENST00000257632 NPHP3Q7Z494 1330 aa26.57■■□□□ 1.84
UPK3B-201ENST00000257632 TULP4Q9NRJ4 1543 aa26.56■■□□□ 1.84
UPK3B-201ENST00000257632 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
UPK3B-201ENST00000257632 FOXO3O43524 673 aa26.55■■□□□ 1.84
UPK3B-201ENST00000257632 POTEAQ6S8J7 498 aa26.55■■□□□ 1.84
UPK3B-201ENST00000257632 USP32Q8NFA0 1604 aa26.54■■□□□ 1.84
UPK3B-201ENST00000257632 PHF8Q9UPP1 1060 aa26.54■■□□□ 1.84
UPK3B-201ENST00000257632 SHPRHQ149N8 1683 aa26.53■■□□□ 1.84
UPK3B-201ENST00000257632 SOS2Q07890 1332 aaPredicted RBP26.52■■□□□ 1.84
UPK3B-201ENST00000257632 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
UPK3B-201ENST00000257632 PRR36Q9H6K5 1346 aa26.5■■□□□ 1.83
UPK3B-201ENST00000257632 XPCQ01831 940 aaPredicted RBP26.5■■□□□ 1.83
UPK3B-201ENST00000257632 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
UPK3B-201ENST00000257632 ITSN1Q15811 1721 aa26.48■■□□□ 1.83
UPK3B-201ENST00000257632 SPATA31A6Q5VVP1 1343 aa26.48■■□□□ 1.83
UPK3B-201ENST00000257632 SRPK2P78362 688 aaKnown RBP26.47■■□□□ 1.83
UPK3B-201ENST00000257632 NUDT16Q96DE0 195 aaKnown RBP26.47■■□□□ 1.83
UPK3B-201ENST00000257632 PXDNQ92626 1479 aa26.47■■□□□ 1.83
UPK3B-201ENST00000257632 ATP7BP35670 1465 aa26.46■■□□□ 1.83
UPK3B-201ENST00000257632 KRT28Q7Z3Y7 464 aa26.45■■□□□ 1.82
UPK3B-201ENST00000257632 PNPLA6Q8IY17 1366 aa26.45■■□□□ 1.82
UPK3B-201ENST00000257632 PSME1Q06323 249 aa26.44■■□□□ 1.82
UPK3B-201ENST00000257632 EVC2Q86UK5 1308 aa26.43■■□□□ 1.82
UPK3B-201ENST00000257632 NUTM2BA6NNL0 878 aaPredicted RBP26.43■■□□□ 1.82
UPK3B-201ENST00000257632 NUTM2EB1AL46 878 aaPredicted RBP26.43■■□□□ 1.82
UPK3B-201ENST00000257632 NUTM2AQ8IVF1 878 aaPredicted RBP26.43■■□□□ 1.82
UPK3B-201ENST00000257632 NGDNQ8NEJ9 315 aaKnown RBP26.42■■□□□ 1.82
UPK3B-201ENST00000257632 CABP2Q9NPB3 220 aa26.42■■□□□ 1.82
UPK3B-201ENST00000257632 LRP6O75581 1613 aa26.42■■□□□ 1.82
UPK3B-201ENST00000257632 MEX3CQ5U5Q3 659 aaKnown RBP26.41■■□□□ 1.82
UPK3B-201ENST00000257632 CCDC61Q9Y6R9 512 aa26.41■■□□□ 1.82
UPK3B-201ENST00000257632 TOPAZ1Q8N9V7 1692 aa26.39■■□□□ 1.82
UPK3B-201ENST00000257632 SBNO2Q9Y2G9 1366 aa26.37■■□□□ 1.81
UPK3B-201ENST00000257632 SPATA31A3Q5VYP0 1347 aa26.37■■□□□ 1.81
UPK3B-201ENST00000257632 TNS3Q68CZ2 1445 aa26.35■■□□□ 1.81
UPK3B-201ENST00000257632 LMOD2Q6P5Q4 547 aa26.35■■□□□ 1.81
UPK3B-201ENST00000257632 PPIP5K1Q6PFW1 1433 aa26.35■■□□□ 1.81
UPK3B-201ENST00000257632 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
UPK3B-201ENST00000257632 COL22A1Q8NFW1 1626 aaPredicted RBP26.34■■□□□ 1.81
UPK3B-201ENST00000257632 USP47Q96K76 1375 aa26.33■■□□□ 1.81
UPK3B-201ENST00000257632 ST20-MTHFSA0A0A6YYL1 179 aa26.32■■□□□ 1.8
UPK3B-201ENST00000257632 PLEKHG3A1L390 1219 aa26.32■■□□□ 1.8
UPK3B-201ENST00000257632 ACEP12821 1306 aa26.32■■□□□ 1.8
UPK3B-201ENST00000257632 PAK3O75914 559 aaPredicted RBP26.3■■□□□ 1.8
UPK3B-201ENST00000257632 TRPM3Q9HCF6 1732 aaPredicted RBP26.3■■□□□ 1.8
UPK3B-201ENST00000257632 POLR3AO14802 1390 aaPredicted RBP26.3■■□□□ 1.8
UPK3B-201ENST00000257632 ARHGEF10O15013 1369 aa26.3■■□□□ 1.8
UPK3B-201ENST00000257632 ADAMTS2O95450 1211 aa26.29■■□□□ 1.8
UPK3B-201ENST00000257632 CABP1Q9NZU7 370 aa26.29■■□□□ 1.8
UPK3B-201ENST00000257632 ATAD2Q6PL18 1390 aa26.29■■□□□ 1.8
UPK3B-201ENST00000257632 SLC24A1O60721 1099 aa26.27■■□□□ 1.8
UPK3B-201ENST00000257632 PLEKHG5O94827 1062 aa26.27■■□□□ 1.8
UPK3B-201ENST00000257632 ZNF772Q68DY9 489 aaPredicted RBP26.27■■□□□ 1.8
UPK3B-201ENST00000257632 HAP1P54257 671 aaPredicted RBP26.26■■□□□ 1.79
UPK3B-201ENST00000257632 C8orf37Q96NL8 207 aa26.25■■□□□ 1.79
UPK3B-201ENST00000257632 TESK2Q96S53 571 aa26.24■■□□□ 1.79
UPK3B-201ENST00000257632 ALS2Q96Q42 1657 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms