RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 AHDC1Q5TGY3 1603 aaPredicted RBP18.58■□□□□ 0.56
CDK7-201ENST00000256443 C1orf167Q5SNV9 1468 aa18.56■□□□□ 0.56
CDK7-201ENST00000256443 BRINP3Q76B58 766 aa18.56■□□□□ 0.56
CDK7-201ENST00000256443 ARHGEF28Q8N1W1 1705 aaKnown RBP18.56■□□□□ 0.56
CDK7-201ENST00000256443 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
CDK7-201ENST00000256443 POGKQ9P215 609 aa18.56■□□□□ 0.56
CDK7-201ENST00000256443 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
CDK7-201ENST00000256443 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
CDK7-201ENST00000256443 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
CDK7-201ENST00000256443 NHSL1Q5SYE7 1610 aa18.54■□□□□ 0.56
CDK7-201ENST00000256443 COL16A1Q07092 1604 aaPredicted RBP18.53■□□□□ 0.56
CDK7-201ENST00000256443 TRPM1Q7Z4N2 1603 aa18.53■□□□□ 0.56
CDK7-201ENST00000256443 ADGRB2O60241 1585 aa18.53■□□□□ 0.56
CDK7-201ENST00000256443 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
CDK7-201ENST00000256443 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDK7-201ENST00000256443 NBPF1Q3BBV0 1214 aa18.49■□□□□ 0.55
CDK7-201ENST00000256443 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
CDK7-201ENST00000256443 JCADQ9P266 1359 aa18.48■□□□□ 0.55
CDK7-201ENST00000256443 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
CDK7-201ENST00000256443 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
CDK7-201ENST00000256443 ORAI2Q96SN7 254 aa18.47■□□□□ 0.55
CDK7-201ENST00000256443 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
CDK7-201ENST00000256443 SHPRHQ149N8 1683 aa18.46■□□□□ 0.55
CDK7-201ENST00000256443 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
CDK7-201ENST00000256443 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
CDK7-201ENST00000256443 RGPD8O14715 1765 aaPredicted RBP18.45■□□□□ 0.54
CDK7-201ENST00000256443 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
CDK7-201ENST00000256443 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
CDK7-201ENST00000256443 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
CDK7-201ENST00000256443 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
CDK7-201ENST00000256443 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
CDK7-201ENST00000256443 GPRASP1Q5JY77 1395 aa18.43■□□□□ 0.54
CDK7-201ENST00000256443 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
CDK7-201ENST00000256443 NBPF8Q3BBV2 869 aa18.42■□□□□ 0.54
CDK7-201ENST00000256443 TIMELESSQ9UNS1 1208 aa18.42■□□□□ 0.54
CDK7-201ENST00000256443 RALGAPBQ86X10 1494 aa18.42■□□□□ 0.54
CDK7-201ENST00000256443 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
CDK7-201ENST00000256443 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
CDK7-201ENST00000256443 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
CDK7-201ENST00000256443 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
CDK7-201ENST00000256443 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
CDK7-201ENST00000256443 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
CDK7-201ENST00000256443 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
CDK7-201ENST00000256443 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
CDK7-201ENST00000256443 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
CDK7-201ENST00000256443 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
CDK7-201ENST00000256443 PHF8Q9UPP1 1060 aa18.38■□□□□ 0.53
CDK7-201ENST00000256443 PXDNQ92626 1479 aa18.38■□□□□ 0.53
CDK7-201ENST00000256443 FOXO3O43524 673 aa18.37■□□□□ 0.53
CDK7-201ENST00000256443 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
CDK7-201ENST00000256443 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
CDK7-201ENST00000256443 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
CDK7-201ENST00000256443 ATP7BP35670 1465 aa18.35■□□□□ 0.53
CDK7-201ENST00000256443 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
CDK7-201ENST00000256443 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
CDK7-201ENST00000256443 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.52
CDK7-201ENST00000256443 TOPAZ1Q8N9V7 1692 aa18.33■□□□□ 0.52
CDK7-201ENST00000256443 PSME1Q06323 249 aa18.32■□□□□ 0.52
CDK7-201ENST00000256443 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
CDK7-201ENST00000256443 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
CDK7-201ENST00000256443 LRP6O75581 1613 aa18.31■□□□□ 0.52
CDK7-201ENST00000256443 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
CDK7-201ENST00000256443 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
CDK7-201ENST00000256443 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
CDK7-201ENST00000256443 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
CDK7-201ENST00000256443 EVC2Q86UK5 1308 aa18.3■□□□□ 0.52
CDK7-201ENST00000256443 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
CDK7-201ENST00000256443 SPATA31A3Q5VYP0 1347 aa18.29■□□□□ 0.52
CDK7-201ENST00000256443 SBNO1A3KN83 1393 aa18.29■□□□□ 0.52
CDK7-201ENST00000256443 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
CDK7-201ENST00000256443 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
CDK7-201ENST00000256443 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
CDK7-201ENST00000256443 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.52
CDK7-201ENST00000256443 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.52
CDK7-201ENST00000256443 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.52
CDK7-201ENST00000256443 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
CDK7-201ENST00000256443 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
CDK7-201ENST00000256443 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
CDK7-201ENST00000256443 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
CDK7-201ENST00000256443 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
CDK7-201ENST00000256443 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
CDK7-201ENST00000256443 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
CDK7-201ENST00000256443 ALS2Q96Q42 1657 aa18.23■□□□□ 0.51
CDK7-201ENST00000256443 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
CDK7-201ENST00000256443 ATAD2Q6PL18 1390 aa18.21■□□□□ 0.51
CDK7-201ENST00000256443 ACEP12821 1306 aa18.21■□□□□ 0.51
CDK7-201ENST00000256443 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
CDK7-201ENST00000256443 ZNF772Q68DY9 489 aaPredicted RBP18.2■□□□□ 0.5
CDK7-201ENST00000256443 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
CDK7-201ENST00000256443 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
CDK7-201ENST00000256443 USP47Q96K76 1375 aa18.19■□□□□ 0.5
CDK7-201ENST00000256443 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
CDK7-201ENST00000256443 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
CDK7-201ENST00000256443 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
CDK7-201ENST00000256443 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
CDK7-201ENST00000256443 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
CDK7-201ENST00000256443 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
CDK7-201ENST00000256443 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
CDK7-201ENST00000256443 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
CDK7-201ENST00000256443 AFF2P51816 1311 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms