RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
HMGB1P5-201ENST00000255320 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
HMGB1P5-201ENST00000255320 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
HMGB1P5-201ENST00000255320 KMT5BQ4FZB7 885 aa8.33□□□□□ -1.08
HMGB1P5-201ENST00000255320 GRIPAP1Q4V328 841 aa8.33□□□□□ -1.08
HMGB1P5-201ENST00000255320 HMX1Q9NP08 348 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P5-201ENST00000255320 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P5-201ENST00000255320 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
HMGB1P5-201ENST00000255320 GPR37L1O60883 481 aa8.32□□□□□ -1.08
HMGB1P5-201ENST00000255320 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
HMGB1P5-201ENST00000255320 MORN1Q5T089 497 aa8.32□□□□□ -1.08
HMGB1P5-201ENST00000255320 ZNF777Q9ULD5 760 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P5-201ENST00000255320 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
HMGB1P5-201ENST00000255320 ACTN4O43707 911 aaKnown RBP8.31□□□□□ -1.08
HMGB1P5-201ENST00000255320 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
HMGB1P5-201ENST00000255320 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
HMGB1P5-201ENST00000255320 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
HMGB1P5-201ENST00000255320 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
HMGB1P5-201ENST00000255320 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
HMGB1P5-201ENST00000255320 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P5-201ENST00000255320 ABL2P42684 1182 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 BCAMP50895 628 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
HMGB1P5-201ENST00000255320 APLP1P51693 650 aa8.28□□□□□ -1.08
HMGB1P5-201ENST00000255320 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
HMGB1P5-201ENST00000255320 TSC1Q92574 1164 aa8.28□□□□□ -1.08
HMGB1P5-201ENST00000255320 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P5-201ENST00000255320 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
HMGB1P5-201ENST00000255320 IRF5Q13568 498 aa8.27□□□□□ -1.09
HMGB1P5-201ENST00000255320 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
HMGB1P5-201ENST00000255320 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
HMGB1P5-201ENST00000255320 PRR14Q9BWN1 585 aa8.27□□□□□ -1.09
HMGB1P5-201ENST00000255320 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
HMGB1P5-201ENST00000255320 POM121CA8CG34 1229 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 BLOC1S3Q6QNY0 202 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 PRM3Q9NNZ6 103 aa8.26□□□□□ -1.09
HMGB1P5-201ENST00000255320 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P5-201ENST00000255320 Q3C1V9 767 aa8.25□□□□□ -1.09
HMGB1P5-201ENST00000255320 EPS8L1Q8TE68 723 aa8.25□□□□□ -1.09
HMGB1P5-201ENST00000255320 WNT2BQ93097 391 aa8.25□□□□□ -1.09
HMGB1P5-201ENST00000255320 TSR3Q9UJK0 312 aaKnown RBP8.25□□□□□ -1.09
HMGB1P5-201ENST00000255320 GOLGA8CPA6NN73 597 aa8.24□□□□□ -1.09
HMGB1P5-201ENST00000255320 PPP4CP60510 307 aa8.24□□□□□ -1.09
HMGB1P5-201ENST00000255320 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
HMGB1P5-201ENST00000255320 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
HMGB1P5-201ENST00000255320 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
HMGB1P5-201ENST00000255320 SERPINA10Q9UK55 444 aa8.23□□□□□ -1.09
HMGB1P5-201ENST00000255320 GLMNQ92990 594 aa8.22□□□□□ -1.09
HMGB1P5-201ENST00000255320 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P5-201ENST00000255320 STAC3Q96MF2 364 aa8.22□□□□□ -1.09
HMGB1P5-201ENST00000255320 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P5-201ENST00000255320 NR6A1Q15406 480 aa8.21□□□□□ -1.1
HMGB1P5-201ENST00000255320 BRICD5Q6PL45 260 aa8.21□□□□□ -1.1
HMGB1P5-201ENST00000255320 ADAMTS19Q8TE59 1207 aa8.21□□□□□ -1.1
HMGB1P5-201ENST00000255320 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
HMGB1P5-201ENST00000255320 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.1
HMGB1P5-201ENST00000255320 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
HMGB1P5-201ENST00000255320 SCUBE3Q8IX30 993 aa8.2□□□□□ -1.1
HMGB1P5-201ENST00000255320 USB1Q9BQ65 265 aaKnown RBP8.2□□□□□ -1.1
HMGB1P5-201ENST00000255320 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
HMGB1P5-201ENST00000255320 NR1I2O75469 434 aa8.18□□□□□ -1.1
HMGB1P5-201ENST00000255320 WASHC4Q2M389 1173 aa8.18□□□□□ -1.1
HMGB1P5-201ENST00000255320 CALR3Q96L12 384 aaKnown RBP8.18□□□□□ -1.1
HMGB1P5-201ENST00000255320 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P5-201ENST00000255320 F12P00748 615 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P5-201ENST00000255320 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
HMGB1P5-201ENST00000255320 JUNDP17535 347 aa8.16□□□□□ -1.1
HMGB1P5-201ENST00000255320 MSS51Q4VC12 460 aa8.15□□□□□ -1.1
HMGB1P5-201ENST00000255320 POTEMA6NI47 508 aa8.14□□□□□ -1.11
HMGB1P5-201ENST00000255320 PTPRNQ16849 979 aa8.14□□□□□ -1.11
HMGB1P5-201ENST00000255320 KCTD12Q96CX2 325 aaKnown RBP8.14□□□□□ -1.11
HMGB1P5-201ENST00000255320 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
HMGB1P5-201ENST00000255320 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
HMGB1P5-201ENST00000255320 DXOO77932 396 aaKnown RBP8.13□□□□□ -1.11
HMGB1P5-201ENST00000255320 COPS2P61201 443 aa8.13□□□□□ -1.11
HMGB1P5-201ENST00000255320 HDGFL1Q5TGJ6 251 aa8.13□□□□□ -1.11
HMGB1P5-201ENST00000255320 FAM160A2Q8N612 972 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P5-201ENST00000255320 ALG2Q9H553 416 aa8.13□□□□□ -1.11
HMGB1P5-201ENST00000255320 TLL1O43897 1013 aa8.12□□□□□ -1.11
HMGB1P5-201ENST00000255320 MMP16P51512 607 aa8.11□□□□□ -1.11
HMGB1P5-201ENST00000255320 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
HMGB1P5-201ENST00000255320 SPSB2Q99619 263 aa8.11□□□□□ -1.11
HMGB1P5-201ENST00000255320 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
HMGB1P5-201ENST00000255320 NYAP1Q6ZVC0 841 aa8.1□□□□□ -1.11
HMGB1P5-201ENST00000255320 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 ZPR1O75312 459 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 CCNYL3P0C7X3 344 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 SOX11P35716 441 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 PNMA1Q8ND90 353 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 MTRQ99707 1265 aa8.09□□□□□ -1.11
HMGB1P5-201ENST00000255320 ADH1BP00325 375 aa8.08□□□□□ -1.12
HMGB1P5-201ENST00000255320 NR1H3Q13133 447 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms