RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
VPS25-201ENST00000253794 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
VPS25-201ENST00000253794 POGKQ9P215 609 aa19.95■□□□□ 0.78
VPS25-201ENST00000253794 C19orf44Q9H6X5 657 aa19.94■□□□□ 0.78
VPS25-201ENST00000253794 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
VPS25-201ENST00000253794 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
VPS25-201ENST00000253794 MSH6P52701 1360 aa19.92■□□□□ 0.78
VPS25-201ENST00000253794 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
VPS25-201ENST00000253794 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
VPS25-201ENST00000253794 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
VPS25-201ENST00000253794 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
VPS25-201ENST00000253794 TESK2Q96S53 571 aa19.9■□□□□ 0.78
VPS25-201ENST00000253794 TULP4Q9NRJ4 1543 aa19.87■□□□□ 0.77
VPS25-201ENST00000253794 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
VPS25-201ENST00000253794 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
VPS25-201ENST00000253794 FMN2Q9NZ56 1722 aa19.86■□□□□ 0.77
VPS25-201ENST00000253794 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
VPS25-201ENST00000253794 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
VPS25-201ENST00000253794 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
VPS25-201ENST00000253794 WASLO00401 505 aaPredicted RBP19.85■□□□□ 0.77
VPS25-201ENST00000253794 MST1RQ04912 1400 aa19.84■□□□□ 0.77
VPS25-201ENST00000253794 ANKARQ7Z5J8 1434 aa19.84■□□□□ 0.77
VPS25-201ENST00000253794 ATF3P18847 181 aa19.83■□□□□ 0.77
VPS25-201ENST00000253794 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
VPS25-201ENST00000253794 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
VPS25-201ENST00000253794 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
VPS25-201ENST00000253794 ATP7BP35670 1465 aa19.8■□□□□ 0.76
VPS25-201ENST00000253794 CDK19Q9BWU1 502 aa19.8■□□□□ 0.76
VPS25-201ENST00000253794 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
VPS25-201ENST00000253794 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
VPS25-201ENST00000253794 TMF1P82094 1093 aa19.78■□□□□ 0.76
VPS25-201ENST00000253794 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
VPS25-201ENST00000253794 TOM1O60784 492 aa19.77■□□□□ 0.76
VPS25-201ENST00000253794 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
VPS25-201ENST00000253794 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
VPS25-201ENST00000253794 TOPAZ1Q8N9V7 1692 aa19.76■□□□□ 0.75
VPS25-201ENST00000253794 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
VPS25-201ENST00000253794 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
VPS25-201ENST00000253794 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
VPS25-201ENST00000253794 ITSN1Q15811 1721 aa19.73■□□□□ 0.75
VPS25-201ENST00000253794 UBAP1LF5GYI3 381 aa19.73■□□□□ 0.75
VPS25-201ENST00000253794 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
VPS25-201ENST00000253794 CABP2Q9NPB3 220 aa19.72■□□□□ 0.75
VPS25-201ENST00000253794 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
VPS25-201ENST00000253794 KIF1AQ12756 1690 aa19.71■□□□□ 0.75
VPS25-201ENST00000253794 NINLQ9Y2I6 1382 aa19.71■□□□□ 0.75
VPS25-201ENST00000253794 PLEKHG3A1L390 1219 aa19.7■□□□□ 0.74
VPS25-201ENST00000253794 BRINP3Q76B58 766 aa19.7■□□□□ 0.74
VPS25-201ENST00000253794 ROBO1Q9Y6N7 1651 aa19.68■□□□□ 0.74
VPS25-201ENST00000253794 RGPD8O14715 1765 aaPredicted RBP19.68■□□□□ 0.74
VPS25-201ENST00000253794 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
VPS25-201ENST00000253794 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
VPS25-201ENST00000253794 POLR3AO14802 1390 aaPredicted RBP19.68■□□□□ 0.74
VPS25-201ENST00000253794 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
VPS25-201ENST00000253794 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
VPS25-201ENST00000253794 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
VPS25-201ENST00000253794 AHDC1Q5TGY3 1603 aaPredicted RBP19.66■□□□□ 0.74
VPS25-201ENST00000253794 ESCO1Q5FWF5 840 aa19.66■□□□□ 0.74
VPS25-201ENST00000253794 PHF8Q9UPP1 1060 aa19.66■□□□□ 0.74
VPS25-201ENST00000253794 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
VPS25-201ENST00000253794 MYOM1P52179 1685 aa19.65■□□□□ 0.74
VPS25-201ENST00000253794 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
VPS25-201ENST00000253794 CPSF1Q10570 1443 aaKnown RBP19.64■□□□□ 0.73
VPS25-201ENST00000253794 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
VPS25-201ENST00000253794 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
VPS25-201ENST00000253794 CABP1Q9NZU7 370 aa19.63■□□□□ 0.73
VPS25-201ENST00000253794 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
VPS25-201ENST00000253794 FBXO41Q8TF61 875 aa19.62■□□□□ 0.73
VPS25-201ENST00000253794 PXDNQ92626 1479 aa19.61■□□□□ 0.73
VPS25-201ENST00000253794 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
VPS25-201ENST00000253794 ACEP12821 1306 aa19.61■□□□□ 0.73
VPS25-201ENST00000253794 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
VPS25-201ENST00000253794 ANKRD36BQ8N2N9 1353 aa19.59■□□□□ 0.73
VPS25-201ENST00000253794 SOS2Q07890 1332 aaPredicted RBP19.59■□□□□ 0.73
VPS25-201ENST00000253794 PMFBP1Q8TBY8 1022 aa19.59■□□□□ 0.73
VPS25-201ENST00000253794 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
VPS25-201ENST00000253794 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
VPS25-201ENST00000253794 AKAP12Q02952 1782 aa19.59■□□□□ 0.73
VPS25-201ENST00000253794 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
VPS25-201ENST00000253794 USP6P35125 1406 aa19.58■□□□□ 0.72
VPS25-201ENST00000253794 MON2Q7Z3U7 1717 aa19.57■□□□□ 0.72
VPS25-201ENST00000253794 FOXO3O43524 673 aa19.57■□□□□ 0.72
VPS25-201ENST00000253794 NGDNQ8NEJ9 315 aaKnown RBP19.57■□□□□ 0.72
VPS25-201ENST00000253794 TERF2IPQ9NYB0 399 aa19.57■□□□□ 0.72
VPS25-201ENST00000253794 COL16A1Q07092 1604 aaPredicted RBP19.57■□□□□ 0.72
VPS25-201ENST00000253794 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
VPS25-201ENST00000253794 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
VPS25-201ENST00000253794 NRKQ7Z2Y5 1582 aa19.56■□□□□ 0.72
VPS25-201ENST00000253794 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
VPS25-201ENST00000253794 SBNO1A3KN83 1393 aa19.56■□□□□ 0.72
VPS25-201ENST00000253794 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
VPS25-201ENST00000253794 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
VPS25-201ENST00000253794 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
VPS25-201ENST00000253794 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
VPS25-201ENST00000253794 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
VPS25-201ENST00000253794 PSME1Q06323 249 aa19.53■□□□□ 0.72
VPS25-201ENST00000253794 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
VPS25-201ENST00000253794 KTN1Q86UP2 1357 aaKnown RBP19.53■□□□□ 0.72
VPS25-201ENST00000253794 DDX17Q92841 729 aaKnown RBP19.52■□□□□ 0.72
VPS25-201ENST00000253794 TNS3Q68CZ2 1445 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms