RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 POLR3AO14802 1390 aaPredicted RBP22.8■■□□□ 1.24
LRFN3-201ENST00000246529 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
LRFN3-201ENST00000246529 ARHGEF28Q8N1W1 1705 aaKnown RBP22.77■■□□□ 1.24
LRFN3-201ENST00000246529 CGNL1Q0VF96 1302 aa22.76■■□□□ 1.23
LRFN3-201ENST00000246529 TCERG1O14776 1098 aaKnown RBP22.75■■□□□ 1.23
LRFN3-201ENST00000246529 MTHFSP49914 203 aa22.75■■□□□ 1.23
LRFN3-201ENST00000246529 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
LRFN3-201ENST00000246529 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
LRFN3-201ENST00000246529 BCAR3O75815 825 aa22.74■■□□□ 1.23
LRFN3-201ENST00000246529 E9PSI1 815 aa22.73■■□□□ 1.23
LRFN3-201ENST00000246529 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
LRFN3-201ENST00000246529 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
LRFN3-201ENST00000246529 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
LRFN3-201ENST00000246529 ANKRD36BQ8N2N9 1353 aa22.72■■□□□ 1.23
LRFN3-201ENST00000246529 PAK3O75914 559 aaPredicted RBP22.72■■□□□ 1.23
LRFN3-201ENST00000246529 SRPK2P78362 688 aaKnown RBP22.72■■□□□ 1.23
LRFN3-201ENST00000246529 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
LRFN3-201ENST00000246529 SHPRHQ149N8 1683 aa22.71■■□□□ 1.23
LRFN3-201ENST00000246529 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
LRFN3-201ENST00000246529 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
LRFN3-201ENST00000246529 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
LRFN3-201ENST00000246529 PDE4AP27815 886 aa22.7■■□□□ 1.22
LRFN3-201ENST00000246529 ANP32AP39687 249 aaKnown RBP22.7■■□□□ 1.22
LRFN3-201ENST00000246529 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.22
LRFN3-201ENST00000246529 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
LRFN3-201ENST00000246529 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
LRFN3-201ENST00000246529 PUS7Q96PZ0 661 aaKnown RBP22.69■■□□□ 1.22
LRFN3-201ENST00000246529 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
LRFN3-201ENST00000246529 TCP11L2Q8N4U5 519 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 RUNDC1Q96C34 613 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 KDM2BQ8NHM5 1336 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 RIMBP3CA6NJZ7 1639 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 RIMBP3BA6NNM3 1639 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 RIMBP3Q9UFD9 1639 aa22.67■■□□□ 1.22
LRFN3-201ENST00000246529 POGKQ9P215 609 aa22.66■■□□□ 1.22
LRFN3-201ENST00000246529 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
LRFN3-201ENST00000246529 PTPRMP28827 1452 aa22.66■■□□□ 1.22
LRFN3-201ENST00000246529 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
LRFN3-201ENST00000246529 MLECQ14165 292 aa22.65■■□□□ 1.22
LRFN3-201ENST00000246529 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
LRFN3-201ENST00000246529 BACH2Q9BYV9 841 aa22.65■■□□□ 1.22
LRFN3-201ENST00000246529 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
LRFN3-201ENST00000246529 GGNBP2Q9H3C7 697 aa22.65■■□□□ 1.22
LRFN3-201ENST00000246529 MS4A1P11836 297 aa22.64■■□□□ 1.22
LRFN3-201ENST00000246529 YTHDC2Q9H6S0 1430 aaKnown RBP22.64■■□□□ 1.21
LRFN3-201ENST00000246529 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
LRFN3-201ENST00000246529 IQSEC2Q5JU85 1478 aa22.62■■□□□ 1.21
LRFN3-201ENST00000246529 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
LRFN3-201ENST00000246529 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
LRFN3-201ENST00000246529 NSD2O96028 1365 aa22.61■■□□□ 1.21
LRFN3-201ENST00000246529 CENPQQ7L2Z9 268 aaPredicted RBP22.6■■□□□ 1.21
LRFN3-201ENST00000246529 ABCC11Q96J66 1382 aa22.6■■□□□ 1.21
LRFN3-201ENST00000246529 ALKQ9UM73 1620 aa22.58■■□□□ 1.21
LRFN3-201ENST00000246529 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.2
LRFN3-201ENST00000246529 CDK19Q9BWU1 502 aa22.57■■□□□ 1.2
LRFN3-201ENST00000246529 FYB1O15117 783 aa22.56■■□□□ 1.2
LRFN3-201ENST00000246529 CD163L1Q9NR16 1453 aa22.56■■□□□ 1.2
LRFN3-201ENST00000246529 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
LRFN3-201ENST00000246529 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
LRFN3-201ENST00000246529 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
LRFN3-201ENST00000246529 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
LRFN3-201ENST00000246529 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
LRFN3-201ENST00000246529 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
LRFN3-201ENST00000246529 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
LRFN3-201ENST00000246529 U2SURPO15042 1029 aaKnown RBP22.55■■□□□ 1.2
LRFN3-201ENST00000246529 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
LRFN3-201ENST00000246529 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
LRFN3-201ENST00000246529 CABP1Q9NZU7 370 aa22.55■■□□□ 1.2
LRFN3-201ENST00000246529 BCL2L13Q9BXK5 485 aa22.53■■□□□ 1.2
LRFN3-201ENST00000246529 COG6Q9Y2V7 657 aa22.53■■□□□ 1.2
LRFN3-201ENST00000246529 WDR63Q8IWG1 891 aa22.53■■□□□ 1.2
LRFN3-201ENST00000246529 A2ML1A8K2U0 1454 aa22.52■■□□□ 1.2
LRFN3-201ENST00000246529 RARSP54136 660 aaKnown RBP22.52■■□□□ 1.2
LRFN3-201ENST00000246529 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
LRFN3-201ENST00000246529 AGLP35573 1532 aa22.51■■□□□ 1.19
LRFN3-201ENST00000246529 NBR1Q14596 966 aa22.51■■□□□ 1.19
LRFN3-201ENST00000246529 ARHGEF40Q8TER5 1519 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 RGS3P49796 1198 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 RIMS2Q9UQ26 1411 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 NLRP1Q9C000 1473 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 IGHDP01880 384 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 CCDC27Q2M243 656 aa22.5■■□□□ 1.19
LRFN3-201ENST00000246529 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
LRFN3-201ENST00000246529 REREQ9P2R6 1566 aa22.48■■□□□ 1.19
LRFN3-201ENST00000246529 FBLN1P23142 703 aa22.48■■□□□ 1.19
LRFN3-201ENST00000246529 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
LRFN3-201ENST00000246529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
LRFN3-201ENST00000246529 PLEKHF1Q96S99 279 aa22.47■■□□□ 1.19
LRFN3-201ENST00000246529 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
LRFN3-201ENST00000246529 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
LRFN3-201ENST00000246529 TSR2Q969E8 191 aaKnown RBP22.46■■□□□ 1.19
LRFN3-201ENST00000246529 RLBP1P12271 317 aa22.46■■□□□ 1.19
LRFN3-201ENST00000246529 CLUAP1Q96AJ1 413 aa22.44■■□□□ 1.18
LRFN3-201ENST00000246529 MYH16Q9H6N6 1097 aa22.43■■□□□ 1.18
LRFN3-201ENST00000246529 TMPOP42166 694 aaKnown RBP22.43■■□□□ 1.18
LRFN3-201ENST00000246529 ADGRB2O60241 1585 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms