RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 POGKQ9P215 609 aa28.37■■■□□ 2.13
SNRPA-201ENST00000243563 TULP4Q9NRJ4 1543 aa28.36■■■□□ 2.13
SNRPA-201ENST00000243563 LRRC7Q96NW7 1537 aa28.35■■■□□ 2.13
SNRPA-201ENST00000243563 MINK1Q8N4C8 1332 aaPredicted RBP28.34■■■□□ 2.13
SNRPA-201ENST00000243563 ADGRB2O60241 1585 aa28.33■■■□□ 2.13
SNRPA-201ENST00000243563 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
SNRPA-201ENST00000243563 DISP3Q9P2K9 1392 aa28.32■■■□□ 2.12
SNRPA-201ENST00000243563 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
SNRPA-201ENST00000243563 TMEM94Q12767 1356 aa28.31■■■□□ 2.12
SNRPA-201ENST00000243563 SBNO2Q9Y2G9 1366 aa28.31■■■□□ 2.12
SNRPA-201ENST00000243563 ADGRL3Q9HAR2 1447 aa28.27■■■□□ 2.12
SNRPA-201ENST00000243563 FMN2Q9NZ56 1722 aa28.24■■■□□ 2.11
SNRPA-201ENST00000243563 CDC42BPGQ6DT37 1551 aa28.23■■■□□ 2.11
SNRPA-201ENST00000243563 RGPD8O14715 1765 aaPredicted RBP28.23■■■□□ 2.11
SNRPA-201ENST00000243563 USP32Q8NFA0 1604 aa28.23■■■□□ 2.11
SNRPA-201ENST00000243563 MYOM1P52179 1685 aa28.2■■■□□ 2.11
SNRPA-201ENST00000243563 WASHC2AQ641Q2 1341 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 ZNF316A6NFI3 1004 aaPredicted RBP28.18■■■□□ 2.1
SNRPA-201ENST00000243563 NCOA3Q9Y6Q9 1424 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 WASLO00401 505 aaPredicted RBP28.18■■■□□ 2.1
SNRPA-201ENST00000243563 TMF1P82094 1093 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 C14orf37Q86TY3 774 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 CDK19Q9BWU1 502 aa28.18■■■□□ 2.1
SNRPA-201ENST00000243563 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
SNRPA-201ENST00000243563 EVC2Q86UK5 1308 aa28.16■■■□□ 2.1
SNRPA-201ENST00000243563 CCDC7Q96M83 1385 aa28.16■■■□□ 2.1
SNRPA-201ENST00000243563 TOPAZ1Q8N9V7 1692 aa28.15■■■□□ 2.1
SNRPA-201ENST00000243563 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
SNRPA-201ENST00000243563 ATP7BP35670 1465 aa28.13■■■□□ 2.09
SNRPA-201ENST00000243563 NUTM2FA1L443 756 aa28.13■■■□□ 2.09
SNRPA-201ENST00000243563 SRPK2P78362 688 aaKnown RBP28.11■■■□□ 2.09
SNRPA-201ENST00000243563 POLR3GLQ9BT43 218 aa28.11■■■□□ 2.09
SNRPA-201ENST00000243563 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
SNRPA-201ENST00000243563 MSH6P52701 1360 aa28.1■■■□□ 2.09
SNRPA-201ENST00000243563 DCCP43146 1447 aa28.09■■■□□ 2.09
SNRPA-201ENST00000243563 ITSN1Q15811 1721 aa28.07■■■□□ 2.08
SNRPA-201ENST00000243563 MST1RQ04912 1400 aa28.07■■■□□ 2.08
SNRPA-201ENST00000243563 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
SNRPA-201ENST00000243563 SLC24A1O60721 1099 aa28.04■■■□□ 2.08
SNRPA-201ENST00000243563 ANKARQ7Z5J8 1434 aa28.03■■■□□ 2.08
SNRPA-201ENST00000243563 C1orf167Q5SNV9 1468 aa28.02■■■□□ 2.08
SNRPA-201ENST00000243563 ATF3P18847 181 aa28.01■■■□□ 2.07
SNRPA-201ENST00000243563 PUS7Q96PZ0 661 aaKnown RBP28.01■■■□□ 2.07
SNRPA-201ENST00000243563 PPIP5K1Q6PFW1 1433 aa28■■■□□ 2.07
SNRPA-201ENST00000243563 ATAD2Q6PL18 1390 aa28■■■□□ 2.07
SNRPA-201ENST00000243563 CDCA8Q53HL2 280 aa28■■■□□ 2.07
SNRPA-201ENST00000243563 CD163L1Q9NR16 1453 aa27.99■■■□□ 2.07
SNRPA-201ENST00000243563 AKAP12Q02952 1782 aa27.99■■■□□ 2.07
SNRPA-201ENST00000243563 SLC12A5Q9H2X9 1139 aa27.99■■■□□ 2.07
SNRPA-201ENST00000243563 CADPS2Q86UW7 1296 aa27.98■■■□□ 2.07
SNRPA-201ENST00000243563 ORAI2Q96SN7 254 aa27.96■■■□□ 2.07
SNRPA-201ENST00000243563 CABP1Q9NZU7 370 aa27.96■■■□□ 2.07
SNRPA-201ENST00000243563 CERKQ8TCT0 537 aa27.96■■■□□ 2.07
SNRPA-201ENST00000243563 TMC1Q8TDI8 760 aa27.96■■■□□ 2.07
SNRPA-201ENST00000243563 CCDC61Q9Y6R9 512 aa27.95■■■□□ 2.06
SNRPA-201ENST00000243563 IQSEC2Q5JU85 1478 aa27.94■■■□□ 2.06
SNRPA-201ENST00000243563 DDX10Q13206 875 aaKnown RBP27.93■■■□□ 2.06
SNRPA-201ENST00000243563 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
SNRPA-201ENST00000243563 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
SNRPA-201ENST00000243563 KIF1AQ12756 1690 aa27.92■■■□□ 2.06
SNRPA-201ENST00000243563 ESCO1Q5FWF5 840 aa27.91■■■□□ 2.06
SNRPA-201ENST00000243563 SLAIN2Q9P270 581 aa27.91■■■□□ 2.06
SNRPA-201ENST00000243563 A0A1W2PP64 1363 aa27.9■■■□□ 2.06
SNRPA-201ENST00000243563 ROBO1Q9Y6N7 1651 aa27.9■■■□□ 2.06
SNRPA-201ENST00000243563 PLEKHG3A1L390 1219 aa27.89■■■□□ 2.05
SNRPA-201ENST00000243563 CPSF1Q10570 1443 aaKnown RBP27.88■■■□□ 2.05
SNRPA-201ENST00000243563 NINLQ9Y2I6 1382 aa27.88■■■□□ 2.05
SNRPA-201ENST00000243563 NRKQ7Z2Y5 1582 aa27.88■■■□□ 2.05
SNRPA-201ENST00000243563 PHF8Q9UPP1 1060 aa27.88■■■□□ 2.05
SNRPA-201ENST00000243563 ACEP12821 1306 aa27.87■■■□□ 2.05
SNRPA-201ENST00000243563 PANK3Q9H999 370 aa27.87■■■□□ 2.05
SNRPA-201ENST00000243563 POLR3AO14802 1390 aaPredicted RBP27.87■■■□□ 2.05
SNRPA-201ENST00000243563 ANKRD36BQ8N2N9 1353 aa27.86■■■□□ 2.05
SNRPA-201ENST00000243563 BRINP3Q76B58 766 aa27.85■■■□□ 2.05
SNRPA-201ENST00000243563 CARD14Q9BXL6 1004 aa27.85■■■□□ 2.05
SNRPA-201ENST00000243563 DDX17Q92841 729 aaKnown RBP27.85■■■□□ 2.05
SNRPA-201ENST00000243563 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
SNRPA-201ENST00000243563 TRPM3Q9HCF6 1732 aaPredicted RBP27.82■■■□□ 2.04
SNRPA-201ENST00000243563 UBAP1LF5GYI3 381 aa27.81■■■□□ 2.04
SNRPA-201ENST00000243563 NGDNQ8NEJ9 315 aaKnown RBP27.8■■■□□ 2.04
SNRPA-201ENST00000243563 USP6P35125 1406 aa27.79■■■□□ 2.04
SNRPA-201ENST00000243563 NSD3Q9BZ95 1437 aa27.79■■■□□ 2.04
SNRPA-201ENST00000243563 KTN1Q86UP2 1357 aaKnown RBP27.79■■■□□ 2.04
SNRPA-201ENST00000243563 FOXO3O43524 673 aa27.79■■■□□ 2.04
SNRPA-201ENST00000243563 PER1O15534 1290 aaPredicted RBP27.78■■■□□ 2.04
SNRPA-201ENST00000243563 XPCQ01831 940 aaPredicted RBP27.78■■■□□ 2.04
SNRPA-201ENST00000243563 TERF2IPQ9NYB0 399 aa27.78■■■□□ 2.04
SNRPA-201ENST00000243563 SSH2Q76I76 1423 aa27.77■■■□□ 2.04
SNRPA-201ENST00000243563 KIF20BQ96Q89 1820 aa27.77■■■□□ 2.04
SNRPA-201ENST00000243563 HDGFL2Q7Z4V5 671 aaPredicted RBP27.77■■■□□ 2.04
SNRPA-201ENST00000243563 PXDNQ92626 1479 aa27.76■■■□□ 2.03
SNRPA-201ENST00000243563 TOM1O60784 492 aa27.76■■■□□ 2.03
SNRPA-201ENST00000243563 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
SNRPA-201ENST00000243563 PIK3C2AO00443 1686 aa27.74■■■□□ 2.03
SNRPA-201ENST00000243563 EDC4Q6P2E9 1401 aaKnown RBP27.73■■■□□ 2.03
SNRPA-201ENST00000243563 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
SNRPA-201ENST00000243563 MARF1Q9Y4F3 1742 aaKnown RBP27.73■■■□□ 2.03
SNRPA-201ENST00000243563 ALS2Q96Q42 1657 aa27.71■■■□□ 2.03
SNRPA-201ENST00000243563 ZNF692Q9BU19 519 aaPredicted RBP27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms