RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 GGT6Q6P531 493 aa15.56■□□□□ 0.08
SEC61A1-201ENST00000243253 KIF3BO15066 747 aa15.55■□□□□ 0.08
SEC61A1-201ENST00000243253 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
SEC61A1-201ENST00000243253 KANK1Q14678 1352 aa15.55■□□□□ 0.08
SEC61A1-201ENST00000243253 NGEFQ8N5V2 710 aa15.55■□□□□ 0.08
SEC61A1-201ENST00000243253 HECW2Q9P2P5 1572 aa15.55■□□□□ 0.08
SEC61A1-201ENST00000243253 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
SEC61A1-201ENST00000243253 PDE3AQ14432 1141 aa15.54■□□□□ 0.08
SEC61A1-201ENST00000243253 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 ANKRD26Q9UPS8 1709 aa15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 GLI2P10070 1586 aa15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
SEC61A1-201ENST00000243253 CANXP27824 592 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-201ENST00000243253 SEC24BO95487 1268 aa15.52■□□□□ 0.07
SEC61A1-201ENST00000243253 GSE1Q14687 1217 aa15.52■□□□□ 0.07
SEC61A1-201ENST00000243253 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.07
SEC61A1-201ENST00000243253 CAMSAP1Q5T5Y3 1602 aa15.52■□□□□ 0.07
SEC61A1-201ENST00000243253 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
SEC61A1-201ENST00000243253 NOS1P29475 1434 aa15.51■□□□□ 0.07
SEC61A1-201ENST00000243253 NPATQ14207 1427 aa15.5■□□□□ 0.07
SEC61A1-201ENST00000243253 ARXQ96QS3 562 aa15.49■□□□□ 0.07
SEC61A1-201ENST00000243253 NSD3Q9BZ95 1437 aa15.49■□□□□ 0.07
SEC61A1-201ENST00000243253 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
SEC61A1-201ENST00000243253 COL3A1P02461 1466 aaPredicted RBP15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 BCL2L13Q9BXK5 485 aa15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 STK26Q9P289 416 aa15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
SEC61A1-201ENST00000243253 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 CLTCQ00610 1675 aaKnown RBP15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 CLUAP1Q96AJ1 413 aa15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 RARSP54136 660 aaKnown RBP15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
SEC61A1-201ENST00000243253 RLBP1P12271 317 aa15.46■□□□□ 0.07
SEC61A1-201ENST00000243253 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.07
SEC61A1-201ENST00000243253 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
SEC61A1-201ENST00000243253 ABCC3O15438 1527 aa15.45■□□□□ 0.06
SEC61A1-201ENST00000243253 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
SEC61A1-201ENST00000243253 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
SEC61A1-201ENST00000243253 PANK1Q8TE04 598 aa15.45■□□□□ 0.06
SEC61A1-201ENST00000243253 TNNQ9UQP3 1299 aa15.44■□□□□ 0.06
SEC61A1-201ENST00000243253 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
SEC61A1-201ENST00000243253 MYO5BQ9ULV0 1848 aa15.44■□□□□ 0.06
SEC61A1-201ENST00000243253 CENPJQ9HC77 1338 aaPredicted RBP15.44■□□□□ 0.06
SEC61A1-201ENST00000243253 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
SEC61A1-201ENST00000243253 MLH3Q9UHC1 1453 aa15.43■□□□□ 0.06
SEC61A1-201ENST00000243253 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
SEC61A1-201ENST00000243253 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
SEC61A1-201ENST00000243253 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
SEC61A1-201ENST00000243253 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
SEC61A1-201ENST00000243253 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
SEC61A1-201ENST00000243253 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
SEC61A1-201ENST00000243253 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
SEC61A1-201ENST00000243253 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
SEC61A1-201ENST00000243253 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
SEC61A1-201ENST00000243253 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 AAMPQ13685 434 aa15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 POGZQ7Z3K3 1410 aa15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
SEC61A1-201ENST00000243253 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
SEC61A1-201ENST00000243253 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
SEC61A1-201ENST00000243253 MLECQ14165 292 aa15.38■□□□□ 0.05
SEC61A1-201ENST00000243253 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
SEC61A1-201ENST00000243253 TBC1D32Q96NH3 1257 aa15.37■□□□□ 0.05
SEC61A1-201ENST00000243253 NSD2O96028 1365 aa15.37■□□□□ 0.05
SEC61A1-201ENST00000243253 MED14O60244 1454 aa15.37■□□□□ 0.05
SEC61A1-201ENST00000243253 KIF20BQ96Q89 1820 aa15.37■□□□□ 0.05
SEC61A1-201ENST00000243253 PTPRMP28827 1452 aa15.36■□□□□ 0.05
SEC61A1-201ENST00000243253 TMEM131LA2VDJ0 1609 aa15.35■□□□□ 0.05
SEC61A1-201ENST00000243253 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
SEC61A1-201ENST00000243253 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
SEC61A1-201ENST00000243253 DIP2CQ9Y2E4 1556 aa15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 MTHFSP49914 203 aa15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 RPGRIP1LQ68CZ1 1315 aa15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
SEC61A1-201ENST00000243253 SETD1AO15047 1707 aaKnown RBP15.33■□□□□ 0.04
SEC61A1-201ENST00000243253 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
SEC61A1-201ENST00000243253 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
SEC61A1-201ENST00000243253 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
SEC61A1-201ENST00000243253 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
SEC61A1-201ENST00000243253 ARHGAP31Q2M1Z3 1444 aa15.32■□□□□ 0.04
SEC61A1-201ENST00000243253 TRIM35Q9UPQ4 493 aa15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 SOX12O15370 315 aa15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
SEC61A1-201ENST00000243253 TBC1D2Q9BYX2 928 aa15.3■□□□□ 0.04
SEC61A1-201ENST00000243253 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms