RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ZNF518AQ6AHZ1 1483 aa21.82■■□□□ 1.08
SSPN-201ENST00000242729 GGNBP2Q9H3C7 697 aa21.82■■□□□ 1.08
SSPN-201ENST00000242729 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
SSPN-201ENST00000242729 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
SSPN-201ENST00000242729 FAM161AQ3B820 660 aa21.8■■□□□ 1.08
SSPN-201ENST00000242729 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
SSPN-201ENST00000242729 RLBP1P12271 317 aa21.8■■□□□ 1.08
SSPN-201ENST00000242729 IDI1Q13907 227 aa21.8■■□□□ 1.08
SSPN-201ENST00000242729 MINK1Q8N4C8 1332 aaPredicted RBP21.8■■□□□ 1.08
SSPN-201ENST00000242729 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
SSPN-201ENST00000242729 FBLN1P23142 703 aa21.78■■□□□ 1.08
SSPN-201ENST00000242729 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
SSPN-201ENST00000242729 RUNDC1Q96C34 613 aa21.78■■□□□ 1.08
SSPN-201ENST00000242729 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.08
SSPN-201ENST00000242729 SEC24BO95487 1268 aa21.75■■□□□ 1.07
SSPN-201ENST00000242729 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
SSPN-201ENST00000242729 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
SSPN-201ENST00000242729 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
SSPN-201ENST00000242729 FBXO31Q5XUX0 539 aaPredicted RBP21.75■■□□□ 1.07
SSPN-201ENST00000242729 POGZQ7Z3K3 1410 aa21.74■■□□□ 1.07
SSPN-201ENST00000242729 EVC2Q86UK5 1308 aa21.73■■□□□ 1.07
SSPN-201ENST00000242729 ADGRB3O60242 1522 aa21.73■■□□□ 1.07
SSPN-201ENST00000242729 KIAA1210Q9ULL0 1709 aa21.73■■□□□ 1.07
SSPN-201ENST00000242729 PPM1GO15355 546 aaPredicted RBP21.73■■□□□ 1.07
SSPN-201ENST00000242729 FRMPD1Q5SYB0 1578 aa21.73■■□□□ 1.07
SSPN-201ENST00000242729 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
SSPN-201ENST00000242729 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
SSPN-201ENST00000242729 NRXN1Q9ULB1 1477 aa21.72■■□□□ 1.07
SSPN-201ENST00000242729 DDRGK1Q96HY6 314 aa21.71■■□□□ 1.07
SSPN-201ENST00000242729 PCDHB15Q9Y5E8 787 aa21.71■■□□□ 1.07
SSPN-201ENST00000242729 PRAM1Q96QH2 718 aa21.7■■□□□ 1.06
SSPN-201ENST00000242729 QRICH2Q9H0J4 1663 aa21.7■■□□□ 1.06
SSPN-201ENST00000242729 IFT172Q9UG01 1749 aa21.7■■□□□ 1.06
SSPN-201ENST00000242729 POGKQ9P215 609 aa21.7■■□□□ 1.06
SSPN-201ENST00000242729 ADGRB1O14514 1584 aa21.69■■□□□ 1.06
SSPN-201ENST00000242729 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
SSPN-201ENST00000242729 SBNO2Q9Y2G9 1366 aa21.68■■□□□ 1.06
SSPN-201ENST00000242729 PDE3AQ14432 1141 aa21.67■■□□□ 1.06
SSPN-201ENST00000242729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.67■■□□□ 1.06
SSPN-201ENST00000242729 MLECQ14165 292 aa21.66■■□□□ 1.06
SSPN-201ENST00000242729 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
SSPN-201ENST00000242729 NFKBIBQ15653 356 aa21.66■■□□□ 1.06
SSPN-201ENST00000242729 ABCC3O15438 1527 aa21.66■■□□□ 1.06
SSPN-201ENST00000242729 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
SSPN-201ENST00000242729 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
SSPN-201ENST00000242729 A0A1W2PP64 1363 aa21.65■■□□□ 1.06
SSPN-201ENST00000242729 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
SSPN-201ENST00000242729 LMTK2Q8IWU2 1503 aa21.63■■□□□ 1.05
SSPN-201ENST00000242729 PPLO60437 1756 aa21.63■■□□□ 1.05
SSPN-201ENST00000242729 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
SSPN-201ENST00000242729 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
SSPN-201ENST00000242729 IL27Q8NEV9 243 aa21.63■■□□□ 1.05
SSPN-201ENST00000242729 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
SSPN-201ENST00000242729 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
SSPN-201ENST00000242729 MLH3Q9UHC1 1453 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 FTSJ3Q8IY81 847 aaKnown RBP21.61■■□□□ 1.05
SSPN-201ENST00000242729 GLI2P10070 1586 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 HECW2Q9P2P5 1572 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 SMC4Q9NTJ3 1288 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
SSPN-201ENST00000242729 FYB1O15117 783 aa21.6■■□□□ 1.05
SSPN-201ENST00000242729 FRAT2O75474 233 aaPredicted RBP21.6■■□□□ 1.05
SSPN-201ENST00000242729 PDZRN3Q9UPQ7 1066 aa21.6■■□□□ 1.05
SSPN-201ENST00000242729 WDR63Q8IWG1 891 aa21.59■■□□□ 1.05
SSPN-201ENST00000242729 SLKQ9H2G2 1235 aaPredicted RBP21.59■■□□□ 1.05
SSPN-201ENST00000242729 MYO3AQ8NEV4 1616 aa21.59■■□□□ 1.05
SSPN-201ENST00000242729 SPRYD3Q8NCJ5 442 aa21.59■■□□□ 1.05
SSPN-201ENST00000242729 SETBP1Q9Y6X0 1596 aa21.59■■□□□ 1.05
SSPN-201ENST00000242729 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
SSPN-201ENST00000242729 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
SSPN-201ENST00000242729 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.04
SSPN-201ENST00000242729 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.04
SSPN-201ENST00000242729 TMPOP42166 694 aaKnown RBP21.57■■□□□ 1.04
SSPN-201ENST00000242729 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
SSPN-201ENST00000242729 USP19O94966 1318 aa21.57■■□□□ 1.04
SSPN-201ENST00000242729 RIPK4P57078 832 aa21.56■■□□□ 1.04
SSPN-201ENST00000242729 ITPRIPQ8IWB1 547 aa21.56■■□□□ 1.04
SSPN-201ENST00000242729 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
SSPN-201ENST00000242729 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
SSPN-201ENST00000242729 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
SSPN-201ENST00000242729 HMOX1P09601 288 aa21.55■■□□□ 1.04
SSPN-201ENST00000242729 SSH1Q8WYL5 1049 aa21.55■■□□□ 1.04
SSPN-201ENST00000242729 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
SSPN-201ENST00000242729 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
SSPN-201ENST00000242729 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
SSPN-201ENST00000242729 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
SSPN-201ENST00000242729 ELL2O00472 640 aaPredicted RBP21.53■■□□□ 1.04
SSPN-201ENST00000242729 DZIP1LQ8IYY4 767 aaKnown RBP21.53■■□□□ 1.04
SSPN-201ENST00000242729 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
SSPN-201ENST00000242729 ZKSCAN2Q63HK3 967 aa21.53■■□□□ 1.04
SSPN-201ENST00000242729 TRIM27P14373 513 aa21.52■■□□□ 1.04
SSPN-201ENST00000242729 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
SSPN-201ENST00000242729 TERF2IPQ9NYB0 399 aa21.52■■□□□ 1.04
SSPN-201ENST00000242729 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
SSPN-201ENST00000242729 MVPQ14764 893 aaKnown RBP21.52■■□□□ 1.03
SSPN-201ENST00000242729 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.03
SSPN-201ENST00000242729 PMFBP1Q8TBY8 1022 aa21.51■■□□□ 1.03
SSPN-201ENST00000242729 USP35Q9P2H5 1018 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms